RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 LCORLQ8N3X6 602 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 TMEM57Q8N5G2 664 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 SDR42E1Q8WUS8 393 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 PPM1EQ8WY54 764 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 NOC4LQ9BVI4 516 aaKnown RBP10.43□□□□□ -0.74
SMAD4-215ENST00000592911 KATNBL1Q9H079 304 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 NKX2-4Q9H2Z4 354 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 FBXO28Q9NVF7 368 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 FEM1BQ9UK73 627 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 GNEQ9Y223 722 aaKnown RBP10.43□□□□□ -0.74
SMAD4-215ENST00000592911 REV3LO60673 3130 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 MYADML2A6NDP7 307 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 GRXCR1A8MXD5 290 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 ACRP10323 421 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 ATP2A2P16615 1042 aaKnown RBP10.42□□□□□ -0.74
SMAD4-215ENST00000592911 CYP2C18P33260 490 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 ADD2P35612 726 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 ITGA7Q13683 1181 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 SBK1Q52WX2 424 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 TMEM67Q5HYA8 995 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 FAM83BQ5T0W9 1011 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 IQSEC1Q6DN90 963 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 ZSCAN25Q6NSZ9 544 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 ANKRD35Q8N283 1001 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 FAM133AQ8N9E0 248 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 MKL1Q969V6 931 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 LENG1Q96BZ8 264 aaPredicted RBP10.42□□□□□ -0.74
SMAD4-215ENST00000592911 LRFN3Q9BTN0 628 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 PPP1R12CQ9BZL4 782 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 AP5M1Q9H0R1 490 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 YBX2Q9Y2T7 364 aaKnown RBP10.42□□□□□ -0.74
SMAD4-215ENST00000592911 CTDP1Q9Y5B0 961 aaPredicted RBP10.42□□□□□ -0.74
SMAD4-215ENST00000592911 MTCH2Q9Y6C9 303 aa10.42□□□□□ -0.74
SMAD4-215ENST00000592911 KIF28PB7ZC32 967 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 USP17L12C9JPN9 530 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 USP17L21D6R901 530 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 F5H6K3 240 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 PLA2G6O60733 806 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 BCAR3O75815 825 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 BAIAP3O94812 1187 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 PARNO95453 639 aaKnown RBP10.41□□□□□ -0.74
SMAD4-215ENST00000592911 TNFAIP2Q03169 654 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 KLRC3Q07444 240 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 CCDC85BQ15834 202 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-215ENST00000592911 FSCN1Q16658 493 aaKnown RBP10.41□□□□□ -0.74
SMAD4-215ENST00000592911 TLK2Q86UE8 772 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 FTSJ3Q8IY81 847 aaKnown RBP10.41□□□□□ -0.74
SMAD4-215ENST00000592911 GMCL1P1Q8NEA9 526 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 HLA-CQ95604 372 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 KIF1BPQ96EK5 621 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 DYNLL2Q96FJ2 89 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 FGD4Q96M96 766 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 ACAD9Q9H845 621 aa10.41□□□□□ -0.74
SMAD4-215ENST00000592911 PLIN4Q96Q06 1357 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 TNKSO95271 1327 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 TRIP12Q14669 1992 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-215ENST00000592911 PI4K2BG5E9Z4 385 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 TLL1O43897 1013 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 MBD4O95243 580 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 NDUFB10O96000 172 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 PTPN11Q06124 597 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-215ENST00000592911 LRRFIP1Q32MZ4 808 aaKnown RBP10.4□□□□□ -0.74
SMAD4-215ENST00000592911 CEP85Q6P2H3 762 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 OTOP2Q7RTS6 562 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 FAM160B2Q86V87 743 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 CCDC144CPQ8IYA2 1237 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 RHPN1Q8TCX5 695 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 MORC4Q8TE76 937 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 FRAT1Q92837 279 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-215ENST00000592911 AGBL1Q96MI9 1066 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 VTA1Q9NP79 307 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 POLR3EQ9NVU0 708 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 RAPGEFL1Q9UHV5 662 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 PNMA2Q9UL42 364 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 RIPK3Q9Y572 518 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 TET1Q8NFU7 2136 aa10.4□□□□□ -0.74
SMAD4-215ENST00000592911 ZNF318Q5VUA4 2279 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 IGKV6D-41A0A0C4DH26 115 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 PRR33A8MZF0 331 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 GOLIM4O00461 696 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 ADCY6O43306 1168 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 B4GALT4O60513 344 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 KPNA6O60684 536 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 RAB11FIP3O75154 756 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 HMMRO75330 724 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 IFIT2P09913 472 aaKnown RBP10.39□□□□□ -0.75
SMAD4-215ENST00000592911 CYP2D6P10635 497 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 ATP5JP18859 108 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 CLEC10AQ8IUN9 316 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 CHURC1Q8WUH1 139 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 CLUAP1Q96AJ1 413 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.39□□□□□ -0.75
SMAD4-215ENST00000592911 MAF1Q9H063 256 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 WNT8AQ9H1J5 351 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 ALDH8A1Q9H2A2 487 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-215ENST00000592911 ARMT1Q9H993 441 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 PAG1Q9NWQ8 432 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 SCN5AQ14524 2016 aa10.39□□□□□ -0.75
SMAD4-215ENST00000592911 ASTN1O14525 1302 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 RAD50Q92878 1312 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms