RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 CCDC194A0A1B0GVG4 234 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 ADAMTS3O15072 1205 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 OAZ1P54368 228 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 HERVK_113P62684 666 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 DNM1Q05193 864 aaKnown RBP16.09■□□□□ 0.17
NLE1-205ENST00000588642 PLS1Q14651 629 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 TMEM132BQ14DG7 1078 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 JAKMIP3Q5VZ66 844 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 REXO1Q8N1G1 1221 aaKnown RBP16.09■□□□□ 0.17
NLE1-205ENST00000588642 MB21D1Q8N884 522 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 REPS2Q8NFH8 660 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 RASGRP4Q8TDF6 673 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 CHAMP1Q96JM3 812 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 PCDHA6Q9UN73 950 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 SLC45A1Q9Y2W3 748 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 PCDHA8Q9Y5H6 950 aa16.09■□□□□ 0.17
NLE1-205ENST00000588642 STAT3P40763 770 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 APLP1P51693 650 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 GRM1Q13255 1194 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 UBE2SQ16763 222 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 MYSM1Q5VVJ2 828 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 SNRNP48Q6IEG0 339 aaKnown RBP16.08■□□□□ 0.16
NLE1-205ENST00000588642 LBX2Q6XYB7 198 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 PIK3AP1Q6ZUJ8 805 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 KRT25Q7Z3Z0 450 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 TNFRSF25Q93038 417 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 PAGR1Q9BTK6 254 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 HOMER2Q9NSB8 354 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 TMEM260Q9NX78 707 aa16.08■□□□□ 0.16
NLE1-205ENST00000588642 TFIP11Q9UBB9 837 aaKnown RBP16.08■□□□□ 0.16
NLE1-205ENST00000588642 TESPA1A2RU30 521 aaPredicted RBP16.07■□□□□ 0.16
NLE1-205ENST00000588642 GCOM1H8Y6P7 765 aaPredicted RBP16.07■□□□□ 0.16
NLE1-205ENST00000588642 ATP2A1O14983 1001 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 POLR2MP0CAP2 368 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 CYP2C8P10632 490 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 ATP2B1P20020 1258 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 INHBEP58166 350 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 KRT85P78386 507 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 NOM1Q5C9Z4 860 aaKnown RBP16.07■□□□□ 0.16
NLE1-205ENST00000588642 ATL3Q6DD88 541 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 USP17L6PQ6QN14 398 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 CLEC17AQ6ZS10 378 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 MCF2L2Q86YR7 1114 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 FAM43AQ8N2R8 423 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 SMCR8Q8TEV9 937 aaPredicted RBP16.07■□□□□ 0.16
NLE1-205ENST00000588642 TRERF1Q96PN7 1200 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 PTPN18Q99952 460 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 TEX13BQ9BXU2 312 aa16.07■□□□□ 0.16
NLE1-205ENST00000588642 NOL7Q9UMY1 257 aaKnown RBP16.07■□□□□ 0.16
NLE1-205ENST00000588642 TRPM7Q96QT4 1865 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 FAM205CA6NFA0 338 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 FAM155AB1AL88 458 aaPredicted RBP16.06■□□□□ 0.16
NLE1-205ENST00000588642 M0R2N6 131 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 CFBP00751 764 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 CEBPZQ03701 1054 aaKnown RBP16.06■□□□□ 0.16
NLE1-205ENST00000588642 NONOQ15233 471 aaKnown RBP eCLIP16.06■□□□□ 0.16
NLE1-205ENST00000588642 DEFB115Q30KQ5 88 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 TKFCQ3LXA3 575 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 EARS2Q5JPH6 523 aaKnown RBP16.06■□□□□ 0.16
NLE1-205ENST00000588642 MCTP2Q6DN12 878 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 CYP4F22Q6NT55 531 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 GTF3C2Q8WUA4 911 aaPredicted RBP16.06■□□□□ 0.16
NLE1-205ENST00000588642 CREBZFQ9NS37 354 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 RNF146Q9NTX7 359 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 BTBD7Q9P203 1132 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 CFAP45Q9UL16 551 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 ZNF214Q9UL59 606 aaPredicted RBP16.06■□□□□ 0.16
NLE1-205ENST00000588642 CNPY2Q9Y2B0 182 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 RABGAP1Q9Y3P9 1069 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 RIPK3Q9Y572 518 aa16.06■□□□□ 0.16
NLE1-205ENST00000588642 GOLGA6L22H0YM25 854 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 MEIS2O14770 477 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 OPLAHO14841 1288 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 PEX10O60683 326 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 HOXA13P31271 388 aaPredicted RBP16.05■□□□□ 0.16
NLE1-205ENST00000588642 RILPL1Q5EBL4 403 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 MUM1L1Q5H9M0 696 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 POTEEQ6S8J3 1075 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 TEX2Q8IWB9 1127 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 CLEC4DQ8WXI8 215 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 TBC1D5Q92609 795 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 PARK7Q99497 189 aaKnown RBP16.05■□□□□ 0.16
NLE1-205ENST00000588642 SPATC1LQ9H0A9 340 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 RBPJLQ9UBG7 517 aa16.05■□□□□ 0.16
NLE1-205ENST00000588642 PIK3CDO00329 1044 aa16.04■□□□□ 0.16
NLE1-205ENST00000588642 NFIBO00712 420 aa16.04■□□□□ 0.16
NLE1-205ENST00000588642 CNMDO75829 334 aa16.04■□□□□ 0.16
NLE1-205ENST00000588642 FOSP01100 380 aaPredicted RBP16.04■□□□□ 0.16
NLE1-205ENST00000588642 CLK2P49760 499 aaKnown RBP16.04■□□□□ 0.16
NLE1-205ENST00000588642 SREBF2Q12772 1141 aa16.04■□□□□ 0.16
NLE1-205ENST00000588642 INF2Q27J81 1249 aa16.04■□□□□ 0.16
NLE1-205ENST00000588642 FCHSD1Q86WN1 690 aa16.04■□□□□ 0.16
NLE1-205ENST00000588642 RIOX2Q8IUF8 465 aa16.04■□□□□ 0.16
NLE1-205ENST00000588642 PGBD1Q96JS3 809 aa16.04■□□□□ 0.16
NLE1-205ENST00000588642 USP28Q96RU2 1077 aa16.04■□□□□ 0.16
NLE1-205ENST00000588642 SCAND2PQ9GZW5 306 aaPredicted RBP16.04■□□□□ 0.16
NLE1-205ENST00000588642 RASSF10A6NK89 507 aa16.03■□□□□ 0.16
NLE1-205ENST00000588642 SPDYE3A6NKU9 549 aa16.03■□□□□ 0.16
NLE1-205ENST00000588642 IGF2BP3O00425 579 aaKnown RBP eCLIP16.03■□□□□ 0.16
NLE1-205ENST00000588642 FIBPO43427 364 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms