RNA–Protein interactions for RNA: ENST00000584592.5

CDK5RAP3-235, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 372 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-235ENST00000584592 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 PRPF3O43395 683 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 CDKL5O76039 1030 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 ELNP15502 786 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 FLT3LGP49771 235 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 COG2Q14746 738 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 SLC35G1Q2M3R5 365 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 CPLX2Q6PUV4 134 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 NECAB1Q8N987 351 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 NSUN7Q8NE18 718 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 ATXN2LQ8WWM7 1075 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 NCOA5Q9HCD5 579 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 HOXC10Q9NYD6 342 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 HCN4Q9Y3Q4 1203 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 LOC285556D6RIA3 1793 aa12.91□□□□□ -0.34
CDK5RAP3-235ENST00000584592 STK36Q9NRP7 1315 aa12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 TMEM232C9JQI7 657 aa12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 RXRAP19793 462 aa12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 STAT2P52630 851 aa12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 MDM2Q00987 491 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 STK3Q13188 491 aa12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 PABPC4Q13310 644 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 FAM83BQ5T0W9 1011 aa12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 TTBK2Q6IQ55 1244 aa12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 KCTD1Q719H9 257 aa12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 SPICE1Q8N0Z3 855 aa12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 USP38Q8NB14 1042 aa12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 RPAP3Q9H6T3 665 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 JMJD4Q9H9V9 463 aa12.9□□□□□ -0.34
CDK5RAP3-235ENST00000584592 PFASO15067 1338 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 MUC6Q6W4X9 2439 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 CPLX1O14810 134 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 ATP2A1O14983 1001 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 PLEKHA8P1O95397 391 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 GOLGA8HP0CJ92 632 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 FDPSP14324 419 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 DSG3P32926 999 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 ZYXQ15942 572 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 PKN1Q16512 942 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 TEX2Q8IWB9 1127 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 CCDC83Q8IWF9 413 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 CCDC144CPQ8IYA2 1237 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 NUP88Q99567 741 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 MAF1Q9H063 256 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 CWC22Q9HCG8 908 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 PNMA2Q9UL42 364 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 OGDHLQ9ULD0 1010 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 PPP1R9AQ9ULJ8 1098 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 PRR12Q9ULL5 1215 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 RLFQ13129 1914 aa12.89□□□□□ -0.35
CDK5RAP3-235ENST00000584592 FRMPD2Q68DX3 1309 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 PNMA6FA0A0J9YX94 578 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 PDHXO00330 501 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 COL6A1P12109 1028 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 OAZ1P54368 228 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 SMAD3P84022 425 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 SSRP1Q08945 709 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 SYDE2Q5VT97 1194 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 RASGRP2Q7LDG7 609 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 ADAMTS19Q8TE59 1207 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 GTF3C2Q8WUA4 911 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 IPO9Q96P70 1041 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 SLF1Q9BQI6 1058 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 UBA5Q9GZZ9 404 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 RANBP17Q9H2T7 1088 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 SLC38A10Q9HBR0 1119 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 GPCPD1Q9NPB8 672 aa12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 NAP1L2Q9ULW6 460 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 V9GY48 417 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-235ENST00000584592 hCG_1984214I3L0E3 225 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 ZBTB5O15062 677 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 DEXIO95424 95 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 TRAF1Q13077 416 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 PFKFB3Q16875 520 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 CCDC96Q2M329 555 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 RAB11FIP4Q86YS3 637 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 TRIM22Q8IYM9 498 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 ZNF713Q8N859 430 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 MB21D1Q8N884 522 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 REPS2Q8NFH8 660 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 ASB2Q96Q27 587 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 UHRF1Q96T88 793 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 SH3GLB2Q9NR46 395 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 PARP14Q460N5 1801 aa12.87□□□□□ -0.35
CDK5RAP3-235ENST00000584592 PTPDC1A2A3K4 754 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms