RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 TMEM67Q5HYA8 995 aa19.42■□□□□ 0.7
SREBF1-219ENST00000580540 ADGRF4Q8IZF3 695 aa19.42■□□□□ 0.7
SREBF1-219ENST00000580540 LENG1Q96BZ8 264 aaPredicted RBP19.42■□□□□ 0.7
SREBF1-219ENST00000580540 PURBQ96QR8 312 aaKnown RBP19.42■□□□□ 0.7
SREBF1-219ENST00000580540 PNMA2Q9UL42 364 aa19.42■□□□□ 0.7
SREBF1-219ENST00000580540 FAM184BQ9ULE4 1060 aa19.42■□□□□ 0.7
SREBF1-219ENST00000580540 SLC27A2O14975 620 aa19.41■□□□□ 0.7
SREBF1-219ENST00000580540 CDC45O75419 566 aa19.41■□□□□ 0.7
SREBF1-219ENST00000580540 PGK1P00558 417 aa19.41■□□□□ 0.7
SREBF1-219ENST00000580540 CALML3P27482 149 aa19.41■□□□□ 0.7
SREBF1-219ENST00000580540 LRRC41Q15345 812 aa19.41■□□□□ 0.7
SREBF1-219ENST00000580540 CDC37Q16543 378 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-219ENST00000580540 STAG2Q8N3U4 1231 aa19.41■□□□□ 0.7
SREBF1-219ENST00000580540 ABHD16BQ9H3Z7 469 aa19.41■□□□□ 0.7
SREBF1-219ENST00000580540 SENP2Q9HC62 589 aa19.41■□□□□ 0.7
SREBF1-219ENST00000580540 ZMYND8Q9ULU4 1186 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-219ENST00000580540 DDX49Q9Y6V7 483 aaKnown RBP19.41■□□□□ 0.7
SREBF1-219ENST00000580540 ASB14A6NK59 587 aa19.4■□□□□ 0.7
SREBF1-219ENST00000580540 LRRC26Q2I0M4 334 aa19.4■□□□□ 0.7
SREBF1-219ENST00000580540 CREB3L3Q68CJ9 461 aa19.4■□□□□ 0.7
SREBF1-219ENST00000580540 CHRDL2Q6WN34 429 aa19.4■□□□□ 0.7
SREBF1-219ENST00000580540 FERMT2Q96AC1 680 aa19.4■□□□□ 0.7
SREBF1-219ENST00000580540 COLQQ9Y215 455 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-219ENST00000580540 MCM3APO60318 1980 aa19.39■□□□□ 0.7
SREBF1-219ENST00000580540 KLRF2D3W0D1 207 aa19.39■□□□□ 0.69
SREBF1-219ENST00000580540 ADCYAP1R1P41586 468 aa19.39■□□□□ 0.69
SREBF1-219ENST00000580540 ANTXR2P58335 489 aa19.39■□□□□ 0.69
SREBF1-219ENST00000580540 CCDC144BQ3MJ40 725 aa19.39■□□□□ 0.69
SREBF1-219ENST00000580540 RNF207Q6ZRF8 634 aa19.39■□□□□ 0.69
SREBF1-219ENST00000580540 NOL8Q76FK4 1167 aaKnown RBP19.39■□□□□ 0.69
SREBF1-219ENST00000580540 EEPD1Q7L9B9 569 aa19.39■□□□□ 0.69
SREBF1-219ENST00000580540 RNF180Q86T96 592 aa19.39■□□□□ 0.69
SREBF1-219ENST00000580540 MB21D2Q8IYB1 491 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-219ENST00000580540 CLEC4DQ8WXI8 215 aa19.39■□□□□ 0.69
SREBF1-219ENST00000580540 WDR19Q8NEZ3 1342 aa19.39■□□□□ 0.69
SREBF1-219ENST00000580540 ALPK3Q96L96 1907 aa19.39■□□□□ 0.69
SREBF1-219ENST00000580540 SYN1P17600 705 aa19.38■□□□□ 0.69
SREBF1-219ENST00000580540 QRICH1Q2TAL8 776 aa19.38■□□□□ 0.69
SREBF1-219ENST00000580540 SLC30A10Q6XR72 485 aa19.38■□□□□ 0.69
SREBF1-219ENST00000580540 CATIPQ7Z7H3 387 aa19.38■□□□□ 0.69
SREBF1-219ENST00000580540 NUP133Q8WUM0 1156 aa19.38■□□□□ 0.69
SREBF1-219ENST00000580540 JMJD4Q9H9V9 463 aa19.38■□□□□ 0.69
SREBF1-219ENST00000580540 ADD3Q9UEY8 706 aaKnown RBP19.38■□□□□ 0.69
SREBF1-219ENST00000580540 ASTN1O14525 1302 aa19.37■□□□□ 0.69
SREBF1-219ENST00000580540 PRC1O43663 620 aa19.37■□□□□ 0.69
SREBF1-219ENST00000580540 CENPBP07199 599 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-219ENST00000580540 MCM5P33992 734 aa19.37■□□□□ 0.69
SREBF1-219ENST00000580540 RPS6P62753 249 aaKnown RBP19.37■□□□□ 0.69
SREBF1-219ENST00000580540 GRM4Q14833 912 aa19.37■□□□□ 0.69
SREBF1-219ENST00000580540 NECTIN1Q15223 517 aa19.37■□□□□ 0.69
SREBF1-219ENST00000580540 NFXL1Q6ZNB6 911 aa19.37■□□□□ 0.69
SREBF1-219ENST00000580540 FBXO11Q86XK2 927 aa19.37■□□□□ 0.69
SREBF1-219ENST00000580540 GPHNQ9NQX3 736 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-219ENST00000580540 MAD2L2Q9UI95 211 aa19.37■□□□□ 0.69
SREBF1-219ENST00000580540 ABCB11O95342 1321 aa19.36■□□□□ 0.69
SREBF1-219ENST00000580540 PALM3A6NDB9 673 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-219ENST00000580540 DUSP11O75319 330 aaKnown RBP19.36■□□□□ 0.69
SREBF1-219ENST00000580540 HABP4Q5JVS0 413 aaKnown RBP19.36■□□□□ 0.69
SREBF1-219ENST00000580540 RNF20Q5VTR2 975 aa19.36■□□□□ 0.69
SREBF1-219ENST00000580540 FBXO16Q8IX29 292 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-219ENST00000580540 IGDCC4Q8TDY8 1250 aa19.36■□□□□ 0.69
SREBF1-219ENST00000580540 SPC25Q9HBM1 224 aa19.36■□□□□ 0.69
SREBF1-219ENST00000580540 ATP11BQ9Y2G3 1177 aa19.36■□□□□ 0.69
SREBF1-219ENST00000580540 SYNRGQ9UMZ2 1314 aa19.35■□□□□ 0.69
SREBF1-219ENST00000580540 C6orf222P0C671 652 aaPredicted RBP19.35■□□□□ 0.69
SREBF1-219ENST00000580540 ALDH5A1P51649 535 aaPredicted RBP19.35■□□□□ 0.69
SREBF1-219ENST00000580540 RTP1P59025 263 aa19.35■□□□□ 0.69
SREBF1-219ENST00000580540 TNFAIP2Q03169 654 aa19.35■□□□□ 0.69
SREBF1-219ENST00000580540 SLC39A5Q6ZMH5 540 aa19.35■□□□□ 0.69
SREBF1-219ENST00000580540 HOMER1Q86YM7 354 aa19.35■□□□□ 0.69
SREBF1-219ENST00000580540 TBC1D5Q92609 795 aa19.35■□□□□ 0.69
SREBF1-219ENST00000580540 KATNBL1Q9H079 304 aa19.35■□□□□ 0.69
SREBF1-219ENST00000580540 PCDH10Q9P2E7 1040 aa19.35■□□□□ 0.69
SREBF1-219ENST00000580540 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-219ENST00000580540 ADCY6O43306 1168 aa19.34■□□□□ 0.69
SREBF1-219ENST00000580540 ADAMTS4O75173 837 aa19.34■□□□□ 0.69
SREBF1-219ENST00000580540 IRX5P78411 483 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-219ENST00000580540 TROAPQ12815 778 aa19.34■□□□□ 0.69
SREBF1-219ENST00000580540 PIBF1Q8WXW3 757 aa19.34■□□□□ 0.69
SREBF1-219ENST00000580540 MYL10Q9BUA6 226 aa19.34■□□□□ 0.69
SREBF1-219ENST00000580540 AMNQ9BXJ7 453 aa19.34■□□□□ 0.69
SREBF1-219ENST00000580540 LRRC2Q9BYS8 371 aa19.34■□□□□ 0.69
SREBF1-219ENST00000580540 LY9Q9HBG7 655 aa19.34■□□□□ 0.69
SREBF1-219ENST00000580540 PDGFCQ9NRA1 345 aa19.34■□□□□ 0.69
SREBF1-219ENST00000580540 PPP4R2Q9NY27 417 aa19.34■□□□□ 0.69
SREBF1-219ENST00000580540 PHF24Q9UPV7 400 aa19.34■□□□□ 0.69
SREBF1-219ENST00000580540 MRPL11Q9Y3B7 192 aaKnown RBP19.34■□□□□ 0.69
SREBF1-219ENST00000580540 MYADML2A6NDP7 307 aa19.33■□□□□ 0.68
SREBF1-219ENST00000580540 CCDC69A6NI79 296 aa19.33■□□□□ 0.68
SREBF1-219ENST00000580540 PDE4DQ08499 809 aa19.33■□□□□ 0.68
SREBF1-219ENST00000580540 COL9A3Q14050 684 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-219ENST00000580540 MCF2L2Q86YR7 1114 aa19.33■□□□□ 0.68
SREBF1-219ENST00000580540 ZNF654Q8IZM8 581 aa19.33■□□□□ 0.68
SREBF1-219ENST00000580540 VTI1AQ96AJ9 217 aa19.33■□□□□ 0.68
SREBF1-219ENST00000580540 TMEM87BQ96K49 555 aa19.33■□□□□ 0.68
SREBF1-219ENST00000580540 PIGSQ96S52 555 aa19.33■□□□□ 0.68
SREBF1-219ENST00000580540 MPHOSPH6Q99547 160 aaKnown RBP19.33■□□□□ 0.68
SREBF1-219ENST00000580540 RBM27Q9P2N5 1060 aaKnown RBP19.33■□□□□ 0.68
SREBF1-219ENST00000580540 MYH6P13533 1939 aa19.32■□□□□ 0.68
SREBF1-219ENST00000580540 A0A1W2PQ45 241 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms