RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 MYO19Q96H55 970 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 SLC39A13Q96H72 371 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 ZNF700Q9H0M5 742 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 KANSL2Q9H9L4 492 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 DDX4Q9NQI0 724 aaKnown RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 TMOD2Q9NZR1 351 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 PRKAG3Q9UGI9 489 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 ZNF112Q9UJU3 913 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 KCNH4Q9UQ05 1017 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 COLQQ9Y215 455 aaPredicted RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 R3HCC1Q9Y3T6 440 aaKnown RBP5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 PCDHB11Q9Y5F2 797 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 ZNF236Q9UL36 1845 aa5.88□□□□□ -1.47
GAPLINC-202ENST00000579007 CCDC189A1A4V9 331 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 PHF20L1A8MW92 1017 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 TMEM229AB2RXF0 380 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 HAX1O00165 279 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 IFRD1O00458 451 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 LDHAP00338 332 aaKnown RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 MYCP01106 439 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 UBTFL1P0CB47 393 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 PMLP29590 882 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 ZEB1P37275 1124 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 SOX9P48436 509 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 RGS3P49796 1198 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 EPHB1P54762 984 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 PPP4CP60510 307 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 IFRD2Q12894 506 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 SNAPC2Q13487 334 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 NFE2Q16621 373 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 SLC9C1Q4G0N8 1177 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 BRDTQ58F21 947 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 OTUD7BQ6GQQ9 843 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 GPAT2Q6NUI2 795 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 BLOC1S3Q6QNY0 202 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 C17orf99Q6UX52 265 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 MAMSTRQ6ZN01 415 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 CCDC84Q86UT8 332 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 PGBD3Q8N328 593 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 SYNPOQ8N3V7 929 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 WDR66Q8TBY9 1149 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 HNRNPLLQ8WVV9 542 aaKnown RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 FAM151AQ8WW52 585 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 TRIM47Q96LD4 638 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 RSRP1Q9BUV0 290 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 MRIQ9BWK5 157 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 ZNF341Q9BYN7 854 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 ZFYVE28Q9HCC9 887 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 ZSWIM6Q9HCJ5 1215 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 ZCCHC17Q9NP64 241 aaKnown RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 JADE2Q9NQC1 790 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 FAM8A1Q9UBU6 413 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 CPA4Q9UI42 421 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 NOB1Q9ULX3 412 aaKnown RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 MROH7-TTC4A0A0A0MT08 1334 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 PDS5AQ29RF7 1337 aaKnown RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 GREB1LQ9C091 1923 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 A0A0C4DFX4 3053 aa5.87□□□□□ -1.47
GAPLINC-202ENST00000579007 PLXNA1Q9UIW2 1896 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 A0A1B0GUL7 405 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 DDTLA6NHG4 134 aaPredicted RBP5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 ALG1L2C9J202 215 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 OPLAHO14841 1288 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 TSPAN6O43657 245 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 KRT18P05783 430 aaKnown RBP5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 BCRP11274 1271 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 CETPP11597 493 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 RARSP54136 660 aaKnown RBP5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 EVX2Q03828 476 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 PPATQ06203 517 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 MTX1Q13505 466 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 PWP1Q13610 501 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 MTFR1Q15390 333 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 PUS10Q3MIT2 529 aaKnown RBP5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 MEI1Q5TIA1 1274 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 DCAF15Q66K64 600 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 INTS3Q68E01 1043 aaKnown RBP5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 ANKRD23Q86SG2 305 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 DNAJC7Q99615 494 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 NAP1L4Q99733 375 aaKnown RBP5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 IDI2Q9BXS1 227 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 COPRSQ9NQ92 184 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 PCDH10Q9P2E7 1040 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 SWAP70Q9UH65 585 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 ATP8A1Q9Y2Q0 1164 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 RPS6KL1Q9Y6S9 549 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 VCANP13611 3396 aa5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 SPTBN5Q9NRC6 3674 aaKnown RBP5.86□□□□□ -1.47
GAPLINC-202ENST00000579007 MYPNQ86TC9 1320 aa5.85□□□□□ -1.47
GAPLINC-202ENST00000579007 A0A0G2JLL6 359 aaPredicted RBP5.85□□□□□ -1.47
GAPLINC-202ENST00000579007 PNMA6EA0A0J9YXQ4 647 aa5.85□□□□□ -1.47
GAPLINC-202ENST00000579007 A0A1W2PRU2 124 aa5.85□□□□□ -1.47
GAPLINC-202ENST00000579007 PDHXO00330 501 aa5.85□□□□□ -1.47
GAPLINC-202ENST00000579007 ZBTB39O15060 712 aa5.85□□□□□ -1.47
GAPLINC-202ENST00000579007 CPNE3O75131 537 aaKnown RBP5.85□□□□□ -1.47
GAPLINC-202ENST00000579007 PDGFAP04085 211 aa5.85□□□□□ -1.47
GAPLINC-202ENST00000579007 MYL1P05976 194 aa5.85□□□□□ -1.47
GAPLINC-202ENST00000579007 HSP90AA1P07900 732 aaKnown RBP5.85□□□□□ -1.47
GAPLINC-202ENST00000579007 CYP2C8P10632 490 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms