RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ZBTB22O15209 634 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 EXOSC10Q01780 885 aaKnown RBP13.29□□□□□ -0.28
ERBB2-206ENST00000578373 CASP8Q14790 479 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 VWA3BQ502W6 1294 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 GBP6Q6ZN66 633 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 CAPN12Q6ZSI9 719 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 NSRP1Q9H0G5 558 aaKnown RBP13.29□□□□□ -0.28
ERBB2-206ENST00000578373 LY9Q9HBG7 655 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 THRAP3Q9Y2W1 955 aaKnown RBP13.29□□□□□ -0.28
ERBB2-206ENST00000578373 FDPSP14324 419 aaKnown RBP13.29□□□□□ -0.28
ERBB2-206ENST00000578373 IL6STP40189 918 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-206ENST00000578373 METTL16Q86W50 562 aaKnown RBP13.29□□□□□ -0.28
ERBB2-206ENST00000578373 TAB3Q8N5C8 712 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-206ENST00000578373 ANKRD42Q8N9B4 389 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 P2RX5Q93086 422 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 CAPS2Q9BXY5 557 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 KANSL2Q9H9L4 492 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-206ENST00000578373 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 EIF4A3P38919 411 aaKnown RBP13.28□□□□□ -0.28
ERBB2-206ENST00000578373 CCZ1BP86790 482 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 CCZ1P86791 482 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-206ENST00000578373 KIFC2Q96AC6 838 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 CCDC127Q96BQ5 260 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 IQCGQ9H095 443 aaKnown RBP13.28□□□□□ -0.28
ERBB2-206ENST00000578373 EPB41L5Q9HCM4 733 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 ADAM21Q9UKJ8 722 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 MFAP3LO75121 409 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 B4GALNT4Q76KP1 1039 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 LRRC45Q96CN5 670 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 OSBPL5Q9H0X9 879 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-206ENST00000578373 ATG3Q9NT62 314 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 PCDHA1Q9Y5I3 950 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 CLIC2O15247 247 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 DDAH1O94760 285 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 MXRA7P84157 204 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 MECOMQ03112 1051 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 ADCY1Q08828 1119 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 NAA25Q14CX7 972 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 KAZALD1Q96I82 304 aa13.28□□□□□ -0.28
ERBB2-206ENST00000578373 STAT1P42224 750 aa13.27□□□□□ -0.28
ERBB2-206ENST00000578373 UBE2SQ16763 222 aa13.27□□□□□ -0.28
ERBB2-206ENST00000578373 ZNF658Q5TYW1 1059 aaPredicted RBP13.27□□□□□ -0.28
ERBB2-206ENST00000578373 RBM17Q96I25 401 aaKnown RBP13.27□□□□□ -0.28
ERBB2-206ENST00000578373 IMPG2Q9BZV3 1241 aa13.27□□□□□ -0.28
ERBB2-206ENST00000578373 DDX25Q9UHL0 483 aaKnown RBP13.27□□□□□ -0.28
ERBB2-206ENST00000578373 BAIAP2L1Q9UHR4 511 aa13.27□□□□□ -0.28
ERBB2-206ENST00000578373 TCP1P17987 556 aaKnown RBP13.27□□□□□ -0.28
ERBB2-206ENST00000578373 GRIN1Q05586 938 aa13.27□□□□□ -0.28
ERBB2-206ENST00000578373 FMR1Q06787 632 aaKnown RBP eCLIP13.27□□□□□ -0.28
ERBB2-206ENST00000578373 ENAHQ8N8S7 591 aaPredicted RBP13.27□□□□□ -0.28
ERBB2-206ENST00000578373 PPM1EQ8WY54 764 aa13.27□□□□□ -0.28
ERBB2-206ENST00000578373 LARP4BQ92615 738 aaKnown RBP13.27□□□□□ -0.28
ERBB2-206ENST00000578373 ADAMTS1Q9UHI8 967 aa13.27□□□□□ -0.28
ERBB2-206ENST00000578373 PCDHA4Q9UN74 947 aa13.27□□□□□ -0.28
ERBB2-206ENST00000578373 ACTN4O43707 911 aaKnown RBP13.27□□□□□ -0.29
ERBB2-206ENST00000578373 ATP8A2Q9NTI2 1148 aa13.27□□□□□ -0.29
ERBB2-206ENST00000578373 HECW2Q9P2P5 1572 aa13.27□□□□□ -0.29
ERBB2-206ENST00000578373 CALUO43852 315 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-206ENST00000578373 IFNAR2P48551 515 aa13.27□□□□□ -0.29
ERBB2-206ENST00000578373 USP37Q86T82 979 aa13.27□□□□□ -0.29
ERBB2-206ENST00000578373 ZNF710Q8N1W2 664 aa13.27□□□□□ -0.29
ERBB2-206ENST00000578373 NHEJ1Q9H9Q4 299 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-206ENST00000578373 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.27□□□□□ -0.29
ERBB2-206ENST00000578373 RRP15Q9Y3B9 282 aaKnown RBP13.27□□□□□ -0.29
ERBB2-206ENST00000578373 ARHGEF40Q8TER5 1519 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 GSG1L2A8MUP6 293 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 PRKG1Q13976 671 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 CC2D1AQ6P1N0 951 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-206ENST00000578373 FNBP1Q96RU3 617 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 NCOA3Q9Y6Q9 1424 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 HEXIM1O94992 359 aaKnown RBP13.26□□□□□ -0.29
ERBB2-206ENST00000578373 PRCPP42785 496 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 SNAP25P60880 206 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 FAM133AQ8N9E0 248 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 CCDC63Q8NA47 563 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 FAM71BQ8TC56 605 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 HPS3Q969F9 1004 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 LZTS2Q9BRK4 669 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 TACO1Q9BSH4 297 aaKnown RBP13.26□□□□□ -0.29
ERBB2-206ENST00000578373 LRRN2O75325 713 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 NR2F2P24468 414 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 TCP11X2Q5H9J9 407 aa13.26□□□□□ -0.29
ERBB2-206ENST00000578373 MKRN1Q9UHC7 482 aaKnown RBP13.26□□□□□ -0.29
ERBB2-206ENST00000578373 CROCC2H7BZ55 1655 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 PRPF3O43395 683 aaKnown RBP13.25□□□□□ -0.29
ERBB2-206ENST00000578373 ZNF365Q70YC5 407 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 GINS2Q9Y248 185 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 H2AFZP0C0S5 128 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 CALRP27797 417 aaKnown RBP13.25□□□□□ -0.29
ERBB2-206ENST00000578373 COL9A3Q14050 684 aaPredicted RBP13.25□□□□□ -0.29
ERBB2-206ENST00000578373 RUFY4Q6ZNE9 571 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 H2AFVQ71UI9 128 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 GOLGA5Q8TBA6 731 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 RPGRIP1Q96KN7 1286 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 PSMD1Q99460 953 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 IFNB1P01574 187 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 TSGA10IPQ3SY00 556 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms