RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 ALDH1A1P00352 501 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 TSPY3P0CV98 308 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 TSPY8P0CW00 308 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 BCRP11274 1271 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 CYB5R4Q7L1T6 521 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 GLMNQ92990 594 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 P2RX7Q99572 595 aaKnown RBP11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 MCOLN1Q9GZU1 580 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 VCPKMTQ9H867 229 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 TXNRD2Q9NNW7 524 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 ZCCHC17Q9NP64 241 aaKnown RBP11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 ANO2Q9NQ90 1003 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 TOMM22Q9NS69 142 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 NYAP2Q9P242 653 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 CLIP2Q9UDT6 1046 aa11.19□□□□□ -0.62
NPLOC4-219ENST00000576713 A0A0G2JMZ2 1700 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 TSPY2A6NKD2 308 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 CNMDO75829 334 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 SLC3A2P08195 630 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 HOXA7P31268 230 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 NECTIN1Q15223 517 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 IMMTQ16891 758 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 OTUD7BQ6GQQ9 843 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 MFSD6Q6ZSS7 791 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 CD99L2Q8TCZ2 262 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 MKL1Q969V6 931 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 RPAP3Q9H6T3 665 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 SENP2Q9HC62 589 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 ZFYVE28Q9HCC9 887 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 FBXO28Q9NVF7 368 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 TMOD4Q9NZQ9 345 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 ZSWIM5Q9P217 1185 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
NPLOC4-219ENST00000576713 PARP14Q460N5 1801 aa11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 E7EWF7 191 aa11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 SLC27A2O14975 620 aa11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 NDUFB10O96000 172 aa11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 ANTXR2P58335 489 aa11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 HERVK_113P62684 666 aa11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 CATSPERGQ6ZRH7 1159 aa11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 CALR3Q96L12 384 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 C1QTNF2Q9BXJ5 285 aa11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 ARHGEF10LQ9HCE6 1279 aa11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 RBPJLQ9UBG7 517 aa11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 CTNNA3Q9UI47 895 aa11.17□□□□□ -0.62
NPLOC4-219ENST00000576713 MKI67P46013 3256 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 MYH4Q9Y623 1939 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 F5H6K3 240 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 FKTNO75072 461 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 TTLL1O95922 423 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 USP14P54578 494 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 SP3Q02447 781 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 KLRC3Q07444 240 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 SEMA3FQ13275 785 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 FAM83BQ5T0W9 1011 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 CREB3L3Q68CJ9 461 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 CHST3Q7LGC8 479 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 ANKRD13CQ8N6S4 541 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 PARK7Q99497 189 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 TMEM47Q9BQJ4 181 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 ZNF287Q9HBT7 754 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 BTBD7Q9P203 1132 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 STX8Q9UNK0 236 aa11.16□□□□□ -0.62
NPLOC4-219ENST00000576713 USP17L15C9J2P7 530 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 USP17L13C9JLJ4 530 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 USP17L11C9JVI0 530 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 USP17L18D6R9N7 530 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 USP17L22D6RA61 530 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 USP17L17D6RBQ6 530 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 USP17L19D6RCP7 530 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 USP17L20D6RJB6 530 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 VARSP26640 1264 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 LACTBP83111 547 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 USP17L24Q0WX57 530 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 ADCK5Q3MIX3 580 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 CTU1Q7Z7A3 348 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 MB21D2Q8IYB1 491 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 ENAHQ8N8S7 591 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 ATG4CQ96DT6 458 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 TRIM47Q96LD4 638 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 TANGO6Q9C0B7 1094 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 RNF41Q9H4P4 317 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 TCP11L1Q9NUJ3 509 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 PCDHB9Q9Y5E1 797 aa11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-219ENST00000576713 WDR46O15213 610 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 PCP11498 1178 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 MCCD1P59942 119 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 IRX3P78415 501 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 SEC23AQ15436 765 aa11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 KIAA1211Q6ZU35 1233 aa11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 OTOP1Q7RTM1 612 aa11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 GMCL1P1Q8NEA9 526 aa11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 SMCR8Q8TEV9 937 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 LPAR1Q92633 364 aa11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 ESR2Q92731 530 aa11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 PORCNQ9H237 461 aa11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 MORF4L1Q9UBU8 362 aa11.14□□□□□ -0.63
NPLOC4-219ENST00000576713 MTMR7Q9Y216 660 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms