RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PPP4R3BQ5MIZ7 849 aa13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 SLC43A3Q8NBI5 491 aa13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 NACAP1Q9BZK3 213 aa13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 EPB41L4AQ9HCS5 686 aaPredicted RBP13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 A1CFQ9NQ94 594 aaKnown RBP13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 RNF146Q9NTX7 359 aa13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 COL9A1P20849 921 aa13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 SLC1A4P43007 532 aa13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 CCDC85BQ15834 202 aaPredicted RBP13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 OTOP2Q7RTS6 562 aa13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 RPUSD2Q8IZ73 545 aaKnown RBP13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 NEDD1Q8NHV4 660 aa13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 ADAMTS19Q8TE59 1207 aa13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 GMCL1Q96IK5 515 aa13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 TRERF1Q96PN7 1200 aa13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 NKX2-4Q9H2Z4 354 aa13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 GNEQ9Y223 722 aaKnown RBP13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 ASTN1O14525 1302 aa13.84□□□□□ -0.19
CTDNEP1-212ENST00000576613 BDP1A6H8Y1 2624 aa13.83□□□□□ -0.19
CTDNEP1-212ENST00000576613 SOWAHBA6NEL2 793 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 PATL2C9JE40 543 aaKnown RBP13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 ALAS1P13196 640 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 CCL23P55773 120 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 ADGRE1Q14246 886 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 IQSEC1Q6DN90 963 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 IFNL3Q8IZI9 196 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 STAG1Q8WVM7 1258 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 AGBL1Q96MI9 1066 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 UHRF1Q96T88 793 aaPredicted RBP13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 NOC4LQ9BVI4 516 aaKnown RBP13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 CHD7Q9P2D1 2997 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 Q9Y3F1 56 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 SLC4A7Q9Y6M7 1214 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 ZNF536O15090 1300 aa13.83□□□□□ -0.2
CTDNEP1-212ENST00000576613 M0R2C6 588 aa13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 DYNC1LI2O43237 492 aaPredicted RBP13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 B4GALT4O60513 344 aa13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 PLA2G6O60733 806 aa13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 SMPD1P17405 629 aa13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 TFAP4Q01664 338 aa13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 PPP2R2DQ66LE6 453 aa13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 NAPBQ9H115 298 aa13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 TRPV6Q9H1D0 765 aa13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 STX8Q9UNK0 236 aa13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 YBX2Q9Y2T7 364 aaKnown RBP13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 UMODL1Q5DID0 1318 aa13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 MYO9BQ13459 2157 aa13.82□□□□□ -0.2
CTDNEP1-212ENST00000576613 PFKMP08237 780 aa13.81□□□□□ -0.2
CTDNEP1-212ENST00000576613 SUPT20HL2P0C7V6 817 aa13.81□□□□□ -0.2
CTDNEP1-212ENST00000576613 MCCP23508 829 aa13.81□□□□□ -0.2
CTDNEP1-212ENST00000576613 EEPD1Q7L9B9 569 aa13.81□□□□□ -0.2
CTDNEP1-212ENST00000576613 WNT8AQ9H1J5 351 aa13.81□□□□□ -0.2
CTDNEP1-212ENST00000576613 VTA1Q9NP79 307 aa13.81□□□□□ -0.2
CTDNEP1-212ENST00000576613 CYP39A1Q9NYL5 469 aa13.81□□□□□ -0.2
CTDNEP1-212ENST00000576613 PCDHA11Q9Y5I1 949 aa13.81□□□□□ -0.2
CTDNEP1-212ENST00000576613 TRANK1O15050 2925 aa13.81□□□□□ -0.2
CTDNEP1-212ENST00000576613 GRIN2DO15399 1336 aa13.81□□□□□ -0.2
CTDNEP1-212ENST00000576613 XIRP2A4UGR9 3374 aa13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 ZBBXA8MT70 800 aa13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 ATP2A2P16615 1042 aaKnown RBP13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 PSMC6P62333 389 aa13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 PPARAQ07869 468 aa13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 AAK1Q2M2I8 961 aa13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 TSHZ3Q63HK5 1081 aa13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 TAPT1Q6NXT6 567 aa13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 KCTD1Q719H9 257 aa13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 FBXO16Q8IX29 292 aaPredicted RBP13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 ALDH8A1Q9H2A2 487 aaPredicted RBP13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 POLR3EQ9NVU0 708 aa13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 ADD3Q9UEY8 706 aaKnown RBP13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 CCPG1Q9ULG6 757 aa13.8□□□□□ -0.2
CTDNEP1-212ENST00000576613 REV3LO60673 3130 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 TSPY2A6NKD2 308 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 CPT1AP50416 773 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 RABGGTBP53611 331 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 MUM1L1Q5H9M0 696 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 RCSD1Q6JBY9 416 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 NSMFQ6X4W1 530 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 KIAA1211Q6ZU35 1233 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 MICALL1Q8N3F8 863 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 CHMP4CQ96CF2 233 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 PDGFCQ9NRA1 345 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 RCAN3Q9UKA8 241 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 PRR12Q9ULL5 1215 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 NCOR1O75376 2440 aa13.79□□□□□ -0.2
CTDNEP1-212ENST00000576613 LCTP09848 1927 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 LOC102724159A0A0B4J2E5 919 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 ERC2O15083 957 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 ICAM1P05362 532 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 ACTN1P12814 892 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 PWP2Q15269 919 aaKnown RBP13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 DUSP28Q4G0W2 176 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 MIER1Q8N108 512 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 MORC4Q8TE76 937 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 SCLYQ96I15 445 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 FSD1Q9BTV5 496 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 GPHNQ9NQX3 736 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms