RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 FZD1Q9UP38 647 aa8.03□□□□□ -1.12
SMG1-215ENST00000568239 ARFGEF1Q9Y6D6 1849 aa8.02□□□□□ -1.12
SMG1-215ENST00000568239 NEMFO60524 1076 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 DDNO94850 711 aaPredicted RBP8.02□□□□□ -1.13
SMG1-215ENST00000568239 ADCY5O95622 1261 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 HOXD11P31277 338 aaPredicted RBP8.02□□□□□ -1.13
SMG1-215ENST00000568239 MMP14P50281 582 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 PRKG1Q13976 671 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 IL17AQ16552 155 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 FBXO11Q86XK2 927 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 FAM177A1Q8N128 213 aaPredicted RBP8.02□□□□□ -1.13
SMG1-215ENST00000568239 TEPSINQ96N21 525 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 AMNQ9BXJ7 453 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 NAT10Q9H0A0 1025 aaKnown RBP8.02□□□□□ -1.13
SMG1-215ENST00000568239 SH2D4AQ9H788 454 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 FAM237AA0A1B0GTK4 181 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 MARCH6O60337 910 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 TXLNAP40222 546 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 POSTNQ15063 836 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 CCDC174Q6PII3 467 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 GPC2Q8N158 579 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 STAMQ92783 540 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 CCDC34Q96HJ3 373 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 UIMC1Q96RL1 719 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 PPP1R9BQ96SB3 815 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 PLIN2Q99541 437 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 RIC8AQ9NPQ8 531 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 GGA3Q9NZ52 723 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 GPRC5DQ9NZD1 345 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 PGAP2Q9UHJ9 254 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 PRR12Q9ULL5 1215 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 PCDHA5Q9Y5H7 936 aa8.02□□□□□ -1.13
SMG1-215ENST00000568239 A0A087X0B3 334 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 PP2D1A8MPX8 630 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 INPP5BP32019 993 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 TXKP42681 527 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 ARL6IP4Q66PJ3 421 aaKnown RBP8.01□□□□□ -1.13
SMG1-215ENST00000568239 MTMR8Q96EF0 704 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 VCPKMTQ9H867 229 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 SMCHD1A6NHR9 2005 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 PHF20L1A8MW92 1017 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 TDP2O95551 362 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 CAVIN2O95810 425 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 MYCNP04198 464 aaPredicted RBP8.01□□□□□ -1.13
SMG1-215ENST00000568239 OR52Z1P0C646 297 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 PRR29P0C7W0 189 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 UBA7P41226 1012 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 TECP42680 631 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 PPP1R18Q6NYC8 613 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 POTEDQ86YR6 584 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 AOPEPQ8N6M6 819 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 C4orf32Q8N8J7 132 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 ACTN4O43707 911 aaKnown RBP8.01□□□□□ -1.13
SMG1-215ENST00000568239 CASP1P29466 404 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 LMOD1P29536 600 aaPredicted RBP8.01□□□□□ -1.13
SMG1-215ENST00000568239 LONP1P36776 959 aaKnown RBP8.01□□□□□ -1.13
SMG1-215ENST00000568239 NLRP12P59046 1061 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 DGKZQ13574 1117 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 KARSQ15046 597 aaKnown RBP8.01□□□□□ -1.13
SMG1-215ENST00000568239 KANK3Q6NY19 840 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 IQUBQ8NA54 791 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 SMARCE1Q969G3 411 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 WRNIP1Q96S55 665 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 TRIM5Q9C035 493 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 FBXO28Q9NVF7 368 aa8.01□□□□□ -1.13
SMG1-215ENST00000568239 HOXA13P31271 388 aaPredicted RBP8□□□□□ -1.13
SMG1-215ENST00000568239 CALCRLQ16602 461 aa8□□□□□ -1.13
SMG1-215ENST00000568239 DCAF15Q66K64 600 aa8□□□□□ -1.13
SMG1-215ENST00000568239 APOBEC3FQ8IUX4 373 aaKnown RBP8□□□□□ -1.13
SMG1-215ENST00000568239 SPC24Q8NBT2 197 aa8□□□□□ -1.13
SMG1-215ENST00000568239 CHURC1Q8WUH1 139 aa8□□□□□ -1.13
SMG1-215ENST00000568239 ZKSCAN4Q969J2 545 aaPredicted RBP8□□□□□ -1.13
SMG1-215ENST00000568239 POLR2AP24928 1970 aaKnown RBP8□□□□□ -1.13
SMG1-215ENST00000568239 SPDYE3A6NKU9 549 aa8□□□□□ -1.13
SMG1-215ENST00000568239 LAD1O00515 517 aa8□□□□□ -1.13
SMG1-215ENST00000568239 AP5Z1O43299 807 aa8□□□□□ -1.13
SMG1-215ENST00000568239 SLC37A4O43826 429 aa8□□□□□ -1.13
SMG1-215ENST00000568239 CTNND1O60716 968 aaKnown RBP8□□□□□ -1.13
SMG1-215ENST00000568239 SLFN14P0C7P3 912 aa8□□□□□ -1.13
SMG1-215ENST00000568239 YBX3P16989 372 aaKnown RBP eCLIP8□□□□□ -1.139e-6■■■□□ 18.1
SMG1-215ENST00000568239 STAT6P42226 847 aa8□□□□□ -1.13
SMG1-215ENST00000568239 HIRAP54198 1017 aaPredicted RBP8□□□□□ -1.13
SMG1-215ENST00000568239 FCHSD1Q86WN1 690 aa8□□□□□ -1.13
SMG1-215ENST00000568239 DRC7Q8IY82 874 aa8□□□□□ -1.13
SMG1-215ENST00000568239 PDLIM2Q96JY6 352 aa8□□□□□ -1.13
SMG1-215ENST00000568239 CFBP00751 764 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 MAP3K10Q02779 954 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 SPP2Q13103 211 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 MTMR2Q13614 643 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 IQCB1Q15051 598 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 C9orf131Q5VYM1 1079 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 BTNL9Q6UXG8 535 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 PAGE5Q96GU1 130 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 TANGO6Q9C0B7 1094 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 GLT8D2Q9H1C3 349 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 BLZF1Q9H2G9 400 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 PICK1Q9NRD5 415 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 DDX25Q9UHL0 483 aaKnown RBP7.99□□□□□ -1.13
SMG1-215ENST00000568239 TUBE1Q9UJT0 475 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 SYNPO2Q9UMS6 1093 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms