RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 IQSEC1Q6DN90 963 aa21.9■■□□□ 1.1
LINC01238-205ENST00000567549 CCSAPQ6IQ19 270 aaPredicted RBP21.9■■□□□ 1.1
LINC01238-205ENST00000567549 BTNL9Q6UXG8 535 aa21.9■■□□□ 1.1
LINC01238-205ENST00000567549 SH3RF1Q7Z6J0 888 aa21.9■■□□□ 1.1
LINC01238-205ENST00000567549 ESR2Q92731 530 aa21.9■■□□□ 1.1
LINC01238-205ENST00000567549 LNPKQ9C0E8 428 aa21.9■■□□□ 1.1
LINC01238-205ENST00000567549 MTMR7Q9Y216 660 aa21.9■■□□□ 1.1
LINC01238-205ENST00000567549 Q9Y3F1 56 aa21.9■■□□□ 1.1
LINC01238-205ENST00000567549 NMT2O60551 498 aa21.89■■□□□ 1.09
LINC01238-205ENST00000567549 NKX3-2P78367 333 aa21.89■■□□□ 1.09
LINC01238-205ENST00000567549 CNTN2Q02246 1040 aa21.89■■□□□ 1.09
LINC01238-205ENST00000567549 PPIGQ13427 754 aaKnown RBP eCLIP21.89■■□□□ 1.09
LINC01238-205ENST00000567549 AKNAD1Q5T1N1 836 aa21.89■■□□□ 1.09
LINC01238-205ENST00000567549 SYDE2Q5VT97 1194 aa21.89■■□□□ 1.09
LINC01238-205ENST00000567549 NSMFQ6X4W1 530 aa21.89■■□□□ 1.09
LINC01238-205ENST00000567549 FAM227BQ96M60 508 aa21.89■■□□□ 1.09
LINC01238-205ENST00000567549 VTA1Q9NP79 307 aa21.89■■□□□ 1.09
LINC01238-205ENST00000567549 DIAPH3Q9NSV4 1193 aa21.89■■□□□ 1.09
LINC01238-205ENST00000567549 CYP39A1Q9NYL5 469 aa21.89■■□□□ 1.09
LINC01238-205ENST00000567549 A0A0D9SFI3 127 aa21.88■■□□□ 1.09
LINC01238-205ENST00000567549 ARVCFO00192 962 aa21.88■■□□□ 1.09
LINC01238-205ENST00000567549 FAAP100Q0VG06 881 aa21.88■■□□□ 1.09
LINC01238-205ENST00000567549 NMIQ13287 307 aaPredicted RBP21.88■■□□□ 1.09
LINC01238-205ENST00000567549 GPATCH4Q5T3I0 446 aaKnown RBP21.88■■□□□ 1.09
LINC01238-205ENST00000567549 TLK2Q86UE8 772 aa21.88■■□□□ 1.09
LINC01238-205ENST00000567549 IQCA1Q86XH1 822 aa21.88■■□□□ 1.09
LINC01238-205ENST00000567549 SMC5Q8IY18 1101 aa21.88■■□□□ 1.09
LINC01238-205ENST00000567549 TMEM199Q8N511 208 aa21.88■■□□□ 1.09
LINC01238-205ENST00000567549 FGD4Q96M96 766 aa21.88■■□□□ 1.09
LINC01238-205ENST00000567549 RANBP17Q9H2T7 1088 aaKnown RBP21.88■■□□□ 1.09
LINC01238-205ENST00000567549 ZNF213O14771 459 aa21.87■■□□□ 1.09
LINC01238-205ENST00000567549 TIMP1P01033 207 aa21.87■■□□□ 1.09
LINC01238-205ENST00000567549 BRDTQ58F21 947 aaPredicted RBP21.87■■□□□ 1.09
LINC01238-205ENST00000567549 CHD1LQ86WJ1 897 aa21.87■■□□□ 1.09
LINC01238-205ENST00000567549 TMEM47Q9BQJ4 181 aa21.87■■□□□ 1.09
LINC01238-205ENST00000567549 MAF1Q9H063 256 aa21.87■■□□□ 1.09
LINC01238-205ENST00000567549 OSBPL3Q9H4L5 887 aa21.87■■□□□ 1.09
LINC01238-205ENST00000567549 C9orf50Q5SZB4 431 aa21.86■■□□□ 1.09
LINC01238-205ENST00000567549 MTIF3Q9H2K0 278 aaKnown RBP21.86■■□□□ 1.09
LINC01238-205ENST00000567549 WDR19Q8NEZ3 1342 aa21.85■■□□□ 1.09
LINC01238-205ENST00000567549 RAD50Q92878 1312 aa21.85■■□□□ 1.09
LINC01238-205ENST00000567549 SOWAHBA6NEL2 793 aa21.85■■□□□ 1.09
LINC01238-205ENST00000567549 SDSP20132 328 aa21.85■■□□□ 1.09
LINC01238-205ENST00000567549 CDK7P50613 346 aa21.85■■□□□ 1.09
LINC01238-205ENST00000567549 FSCN1Q16658 493 aaKnown RBP21.85■■□□□ 1.09
LINC01238-205ENST00000567549 MFSD5Q6N075 450 aa21.85■■□□□ 1.09
LINC01238-205ENST00000567549 CHMP4CQ96CF2 233 aa21.85■■□□□ 1.09
LINC01238-205ENST00000567549 KATNBL1Q9H079 304 aa21.85■■□□□ 1.09
LINC01238-205ENST00000567549 INCENPQ9NQS7 918 aa21.85■■□□□ 1.09
LINC01238-205ENST00000567549 CTNNA3Q9UI47 895 aa21.85■■□□□ 1.09
LINC01238-205ENST00000567549 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.84■■□□□ 1.09
LINC01238-205ENST00000567549 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.84■■□□□ 1.09
LINC01238-205ENST00000567549 PTPDC1A2A3K4 754 aa21.84■■□□□ 1.09
LINC01238-205ENST00000567549 DLL1O00548 723 aa21.84■■□□□ 1.09
LINC01238-205ENST00000567549 PDHBP11177 359 aa21.84■■□□□ 1.09
LINC01238-205ENST00000567549 MUM1L1Q5H9M0 696 aa21.84■■□□□ 1.09
LINC01238-205ENST00000567549 DGKHQ86XP1 1220 aa21.84■■□□□ 1.09
LINC01238-205ENST00000567549 TBX21Q9UL17 535 aa21.84■■□□□ 1.09
LINC01238-205ENST00000567549 MYADML2A6NDP7 307 aa21.83■■□□□ 1.09
LINC01238-205ENST00000567549 HAND2P61296 217 aa21.83■■□□□ 1.09
LINC01238-205ENST00000567549 NUCB1Q02818 461 aa21.83■■□□□ 1.09
LINC01238-205ENST00000567549 B4GALNT3Q6L9W6 998 aa21.83■■□□□ 1.09
LINC01238-205ENST00000567549 PSRC1Q6PGN9 363 aaPredicted RBP21.83■■□□□ 1.09
LINC01238-205ENST00000567549 ZNF589Q86UQ0 364 aaPredicted RBP21.83■■□□□ 1.09
LINC01238-205ENST00000567549 DNERQ8NFT8 737 aa21.83■■□□□ 1.09
LINC01238-205ENST00000567549 MORC4Q8TE76 937 aa21.83■■□□□ 1.09
LINC01238-205ENST00000567549 GPCPD1Q9NPB8 672 aa21.83■■□□□ 1.09
LINC01238-205ENST00000567549 GNEQ9Y223 722 aaKnown RBP21.83■■□□□ 1.09
LINC01238-205ENST00000567549 NKRFO15226 690 aaKnown RBP eCLIP21.82■■□□□ 1.08
LINC01238-205ENST00000567549 DYNC1LI2O43237 492 aaPredicted RBP21.82■■□□□ 1.08
LINC01238-205ENST00000567549 SLC16A2P36021 539 aa21.82■■□□□ 1.08
LINC01238-205ENST00000567549 CPT1AP50416 773 aa21.82■■□□□ 1.08
LINC01238-205ENST00000567549 ZNF543Q08ER8 600 aa21.82■■□□□ 1.08
LINC01238-205ENST00000567549 IMMTQ16891 758 aaKnown RBP21.82■■□□□ 1.08
LINC01238-205ENST00000567549 RNF207Q6ZRF8 634 aa21.82■■□□□ 1.08
LINC01238-205ENST00000567549 KIAA1211Q6ZU35 1233 aa21.82■■□□□ 1.08
LINC01238-205ENST00000567549 CNNM2Q9H8M5 875 aa21.82■■□□□ 1.08
LINC01238-205ENST00000567549 GPHNQ9NQX3 736 aaPredicted RBP21.82■■□□□ 1.08
LINC01238-205ENST00000567549 POLR3EQ9NVU0 708 aa21.82■■□□□ 1.08
LINC01238-205ENST00000567549 FRMPD2Q68DX3 1309 aaPredicted RBP21.81■■□□□ 1.08
LINC01238-205ENST00000567549 ADCY6O43306 1168 aa21.81■■□□□ 1.08
LINC01238-205ENST00000567549 ALDH5A1P51649 535 aaPredicted RBP21.81■■□□□ 1.08
LINC01238-205ENST00000567549 SNAP25P60880 206 aa21.81■■□□□ 1.08
LINC01238-205ENST00000567549 PDE4DQ08499 809 aa21.81■■□□□ 1.08
LINC01238-205ENST00000567549 ITGA7Q13683 1181 aa21.81■■□□□ 1.08
LINC01238-205ENST00000567549 BAATQ14032 418 aaPredicted RBP21.81■■□□□ 1.08
LINC01238-205ENST00000567549 DUSP28Q4G0W2 176 aa21.81■■□□□ 1.08
LINC01238-205ENST00000567549 FBXO16Q8IX29 292 aaPredicted RBP21.81■■□□□ 1.08
LINC01238-205ENST00000567549 FAM126BQ8IXS8 530 aa21.81■■□□□ 1.08
LINC01238-205ENST00000567549 FAM161BQ96MY7 647 aa21.81■■□□□ 1.08
LINC01238-205ENST00000567549 GUCD1Q96NT3 240 aa21.81■■□□□ 1.08
LINC01238-205ENST00000567549 SEMA6BQ9H3T3 888 aa21.81■■□□□ 1.08
LINC01238-205ENST00000567549 KAT14Q9H8E8 782 aa21.81■■□□□ 1.08
LINC01238-205ENST00000567549 LRRC37A2A6NM11 1700 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 SUPT20HL2P0C7V6 817 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 SNHG28P0DPA3 235 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 SMPD1P17405 629 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 ITGB8P26012 769 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 BEX3Q00994 111 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 TTBK2Q6IQ55 1244 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms