RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 KRT40Q6A162 431 aa17.85■□□□□ 0.45
SNHG20-204ENST00000566583 C17orf99Q6UX52 265 aa17.85■□□□□ 0.45
SNHG20-204ENST00000566583 CPXCR1Q8N123 301 aa17.85■□□□□ 0.45
SNHG20-204ENST00000566583 DNAJC5GQ8N7S2 189 aa17.85■□□□□ 0.45
SNHG20-204ENST00000566583 CLEC4DQ8WXI8 215 aa17.85■□□□□ 0.45
SNHG20-204ENST00000566583 C8orf76Q96K31 380 aa17.85■□□□□ 0.45
SNHG20-204ENST00000566583 SPATC1LQ9H0A9 340 aa17.85■□□□□ 0.45
SNHG20-204ENST00000566583 CCPG1Q9ULG6 757 aa17.85■□□□□ 0.45
SNHG20-204ENST00000566583 ZSWIM8A7E2V4 1837 aa17.85■□□□□ 0.45
SNHG20-204ENST00000566583 ZNF236Q9UL36 1845 aa17.85■□□□□ 0.45
SNHG20-204ENST00000566583 TCHHQ07283 1943 aa17.85■□□□□ 0.45
SNHG20-204ENST00000566583 M0R2N6 131 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 TLR2O60603 784 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 ALDH1A1P00352 501 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 PDCP20941 246 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 ERVK-9P63128 1117 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 ERVK-24P63145 666 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 TRAF1Q13077 416 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 CRHR2Q13324 411 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 FAM110CQ1W6H9 321 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 TKFCQ3LXA3 575 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 USH1GQ495M9 461 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 LARP1BQ659C4 914 aaKnown RBP17.84■□□□□ 0.45
SNHG20-204ENST00000566583 SNRNP48Q6IEG0 339 aaKnown RBP17.84■□□□□ 0.45
SNHG20-204ENST00000566583 DAGLBQ8NCG7 672 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 SMCR8Q8TEV9 937 aaPredicted RBP17.84■□□□□ 0.45
SNHG20-204ENST00000566583 PAGR1Q9BTK6 254 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 MOV10L1Q9BXT6 1211 aaKnown RBP17.84■□□□□ 0.45
SNHG20-204ENST00000566583 R3HDMLQ9H3Y0 253 aa17.84■□□□□ 0.45
SNHG20-204ENST00000566583 MMP1P03956 469 aa17.83■□□□□ 0.44
SNHG20-204ENST00000566583 NAPAP54920 295 aa17.83■□□□□ 0.44
SNHG20-204ENST00000566583 MUM1L1Q5H9M0 696 aa17.83■□□□□ 0.44
SNHG20-204ENST00000566583 SHCBP1Q8NEM2 672 aa17.83■□□□□ 0.44
SNHG20-204ENST00000566583 ZFYVE28Q9HCC9 887 aa17.83■□□□□ 0.44
SNHG20-204ENST00000566583 KCNJ14Q9UNX9 436 aa17.83■□□□□ 0.44
SNHG20-204ENST00000566583 MTMR6Q9Y217 621 aa17.83■□□□□ 0.44
SNHG20-204ENST00000566583 ALAS1P13196 640 aa17.82■□□□□ 0.44
SNHG20-204ENST00000566583 PKP1Q13835 747 aa17.82■□□□□ 0.44
SNHG20-204ENST00000566583 TEX2Q8IWB9 1127 aa17.82■□□□□ 0.44
SNHG20-204ENST00000566583 ANKRD13CQ8N6S4 541 aa17.82■□□□□ 0.44
SNHG20-204ENST00000566583 CCDC148Q8NFR7 591 aa17.82■□□□□ 0.44
SNHG20-204ENST00000566583 CCDC12Q8WUD4 166 aaPredicted RBP17.82■□□□□ 0.44
SNHG20-204ENST00000566583 TNFRSF25Q93038 417 aa17.82■□□□□ 0.44
SNHG20-204ENST00000566583 RIC8AQ9NPQ8 531 aa17.82■□□□□ 0.44
SNHG20-204ENST00000566583 ZDHHC9Q9Y397 364 aa17.82■□□□□ 0.44
SNHG20-204ENST00000566583 MRPL11Q9Y3B7 192 aaKnown RBP17.82■□□□□ 0.44
SNHG20-204ENST00000566583 SMCO2A6NFE2 343 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 NFIBO00712 420 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 MEIS2O14770 477 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 STX6O43752 255 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 SLC25A27O95847 323 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 PDIA4P13667 645 aaKnown RBP17.81■□□□□ 0.44
SNHG20-204ENST00000566583 XBP1P17861 261 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 CLK2P49760 499 aaKnown RBP17.81■□□□□ 0.44
SNHG20-204ENST00000566583 FOSBP53539 338 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 GUCY1B3Q02153 619 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 GALNT17Q6IS24 598 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 CHST13Q8NET6 341 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 GPRC5AQ8NFJ5 357 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 TBC1D5Q92609 795 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 TRERF1Q96PN7 1200 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 MAF1Q9H063 256 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 RNF146Q9NTX7 359 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 RNF186Q9NXI6 227 aa17.81■□□□□ 0.44
SNHG20-204ENST00000566583 DAXXQ9UER7 740 aaPredicted RBP17.81■□□□□ 0.44
SNHG20-204ENST00000566583 CTDP1Q9Y5B0 961 aaPredicted RBP17.81■□□□□ 0.44
SNHG20-204ENST00000566583 LRRC37A2A6NM11 1700 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 PIK3CDO00329 1044 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 CALML3P27482 149 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 COPB2P35606 906 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 HSD17B4P51659 736 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 PLS1Q14651 629 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 SAMD3Q8N6K7 520 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 OXER1Q8TDS5 423 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 PORCNQ9H237 461 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 CPA4Q9UI42 421 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 CIZ1Q9ULV3 898 aaPredicted RBP17.8■□□□□ 0.44
SNHG20-204ENST00000566583 PCDHA4Q9UN74 947 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 MCM3APO60318 1980 aa17.8■□□□□ 0.44
SNHG20-204ENST00000566583 KIF28PB7ZC32 967 aa17.79■□□□□ 0.44
SNHG20-204ENST00000566583 BRD1O95696 1058 aa17.79■□□□□ 0.44
SNHG20-204ENST00000566583 ERCC3P19447 782 aa17.79■□□□□ 0.44
SNHG20-204ENST00000566583 U2AF2P26368 475 aaKnown RBP eCLIP17.79■□□□□ 0.44
SNHG20-204ENST00000566583 ADCY7P51828 1080 aa17.79■□□□□ 0.44
SNHG20-204ENST00000566583 NLRP5P59047 1200 aa17.79■□□□□ 0.44
SNHG20-204ENST00000566583 BLIDQ8IZY5 108 aa17.79■□□□□ 0.44
SNHG20-204ENST00000566583 ACAD9Q9H845 621 aa17.79■□□□□ 0.44
SNHG20-204ENST00000566583 PSTPIP2Q9H939 334 aa17.79■□□□□ 0.44
SNHG20-204ENST00000566583 C6orf50Q9HD87 102 aa17.79■□□□□ 0.44
SNHG20-204ENST00000566583 BTBD18B2RXH4 712 aa17.78■□□□□ 0.44
SNHG20-204ENST00000566583 GNA11P29992 359 aa17.78■□□□□ 0.44
SNHG20-204ENST00000566583 TRIM29Q14134 588 aa17.78■□□□□ 0.44
SNHG20-204ENST00000566583 DIS3L2Q8IYB7 885 aaKnown RBP17.78■□□□□ 0.44
SNHG20-204ENST00000566583 CUL5Q93034 780 aa17.78■□□□□ 0.44
SNHG20-204ENST00000566583 GLT8D2Q9H1C3 349 aa17.78■□□□□ 0.44
SNHG20-204ENST00000566583 MROH8Q9H579 483 aa17.78■□□□□ 0.44
SNHG20-204ENST00000566583 EFCC1Q9HA90 598 aa17.78■□□□□ 0.44
SNHG20-204ENST00000566583 HOMER2Q9NSB8 354 aa17.78■□□□□ 0.44
SNHG20-204ENST00000566583 SAGE1Q9NXZ1 904 aa17.78■□□□□ 0.44
SNHG20-204ENST00000566583 MAP3K20Q9NYL2 800 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms