RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 CCSAPQ6IQ19 270 aaPredicted RBP19.35■□□□□ 0.69
AC004449.1-201ENST00000564240 TTBK2Q6IQ55 1244 aa19.35■□□□□ 0.69
AC004449.1-201ENST00000564240 MFSD6Q6ZSS7 791 aa19.35■□□□□ 0.69
AC004449.1-201ENST00000564240 RASGRP2Q7LDG7 609 aa19.35■□□□□ 0.69
AC004449.1-201ENST00000564240 GUCD1Q96NT3 240 aa19.35■□□□□ 0.69
AC004449.1-201ENST00000564240 TMEM47Q9BQJ4 181 aa19.35■□□□□ 0.69
AC004449.1-201ENST00000564240 UPF3AQ9H1J1 476 aaKnown RBP19.35■□□□□ 0.69
AC004449.1-201ENST00000564240 LTBP2Q14767 1821 aa19.35■□□□□ 0.69
AC004449.1-201ENST00000564240 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.34■□□□□ 0.69
AC004449.1-201ENST00000564240 ARVCFO00192 962 aa19.34■□□□□ 0.69
AC004449.1-201ENST00000564240 ADCY6O43306 1168 aa19.34■□□□□ 0.69
AC004449.1-201ENST00000564240 TIMP1P01033 207 aa19.34■□□□□ 0.69
AC004449.1-201ENST00000564240 EPHB4P54760 987 aa19.34■□□□□ 0.69
AC004449.1-201ENST00000564240 MFAP1P55081 439 aaKnown RBP19.34■□□□□ 0.69
AC004449.1-201ENST00000564240 SYDE2Q5VT97 1194 aa19.34■□□□□ 0.69
AC004449.1-201ENST00000564240 CDX2Q99626 313 aaPredicted RBP19.34■□□□□ 0.69
AC004449.1-201ENST00000564240 CYP39A1Q9NYL5 469 aa19.34■□□□□ 0.69
AC004449.1-201ENST00000564240 PTPDC1A2A3K4 754 aa19.33■□□□□ 0.68
AC004449.1-201ENST00000564240 ICAM1P05362 532 aa19.33■□□□□ 0.68
AC004449.1-201ENST00000564240 IQSEC1Q6DN90 963 aa19.33■□□□□ 0.68
AC004449.1-201ENST00000564240 KIAA1211Q6ZU35 1233 aa19.33■□□□□ 0.68
AC004449.1-201ENST00000564240 TLK2Q86UE8 772 aa19.33■□□□□ 0.68
AC004449.1-201ENST00000564240 PPP1R12CQ9BZL4 782 aa19.33■□□□□ 0.68
AC004449.1-201ENST00000564240 CCDC171Q6TFL3 1326 aa19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 CDK7P50613 346 aa19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 PPIGQ13427 754 aaKnown RBP eCLIP19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 BAATQ14032 418 aaPredicted RBP19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 CXCL17Q6UXB2 119 aa19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 TICAM2Q86XR7 235 aa19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 FBXO16Q8IX29 292 aaPredicted RBP19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 TMEM199Q8N511 208 aa19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 KATNBL1Q9H079 304 aa19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 PDGFCQ9NRA1 345 aa19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 TCP11L1Q9NUJ3 509 aa19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 ADD3Q9UEY8 706 aaKnown RBP19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 DDX49Q9Y6V7 483 aaKnown RBP19.32■□□□□ 0.68
AC004449.1-201ENST00000564240 CABYRO75952 493 aa19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 FGRP09769 529 aa19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 SMPD1P17405 629 aa19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 AAMPQ13685 434 aa19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 FSCN1Q16658 493 aaKnown RBP19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 AKNAD1Q5T1N1 836 aa19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 MFSD5Q6N075 450 aa19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 ZNF589Q86UQ0 364 aaPredicted RBP19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 PURBQ96QR8 312 aaKnown RBP19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 RANBP17Q9H2T7 1088 aaKnown RBP19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 RNF41Q9H4P4 317 aaPredicted RBP19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 DNAH12Q6ZR08 3092 aa19.31■□□□□ 0.68
AC004449.1-201ENST00000564240 ZNF213O14771 459 aa19.3■□□□□ 0.68
AC004449.1-201ENST00000564240 SDSP20132 328 aa19.3■□□□□ 0.68
AC004449.1-201ENST00000564240 CALML3P27482 149 aa19.3■□□□□ 0.68
AC004449.1-201ENST00000564240 BTNL9Q6UXG8 535 aa19.3■□□□□ 0.68
AC004449.1-201ENST00000564240 MYLIPQ8WY64 445 aa19.3■□□□□ 0.68
AC004449.1-201ENST00000564240 TTC14Q96N46 770 aa19.3■□□□□ 0.68
AC004449.1-201ENST00000564240 MPHOSPH6Q99547 160 aaKnown RBP19.3■□□□□ 0.68
AC004449.1-201ENST00000564240 VTA1Q9NP79 307 aa19.3■□□□□ 0.68
AC004449.1-201ENST00000564240 TBX21Q9UL17 535 aa19.3■□□□□ 0.68
AC004449.1-201ENST00000564240 NOVP48745 357 aa19.29■□□□□ 0.68
AC004449.1-201ENST00000564240 ITGA7Q13683 1181 aa19.29■□□□□ 0.68
AC004449.1-201ENST00000564240 CHD1LQ86WJ1 897 aa19.29■□□□□ 0.68
AC004449.1-201ENST00000564240 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.29■□□□□ 0.68
AC004449.1-201ENST00000564240 ESR2Q92731 530 aa19.29■□□□□ 0.68
AC004449.1-201ENST00000564240 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.29■□□□□ 0.68
AC004449.1-201ENST00000564240 ZKSCAN3Q9BRR0 538 aa19.29■□□□□ 0.68
AC004449.1-201ENST00000564240 DIAPH3Q9NSV4 1193 aa19.29■□□□□ 0.68
AC004449.1-201ENST00000564240 PNMA2Q9UL42 364 aa19.29■□□□□ 0.68
AC004449.1-201ENST00000564240 GNEQ9Y223 722 aaKnown RBP19.29■□□□□ 0.68
AC004449.1-201ENST00000564240 LAMA3Q16787 3333 aa19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 ACRP10323 421 aa19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 PCP11498 1178 aaKnown RBP19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 FOSL2P15408 326 aa19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 CSF2RAP15509 400 aa19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 CYP2C18P33260 490 aa19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 TAPT1Q6NXT6 567 aa19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 CWC27Q6UX04 472 aaKnown RBP19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 RNF207Q6ZRF8 634 aa19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 FAM126BQ8IXS8 530 aa19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 TTYH1Q9H313 450 aaPredicted RBP19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 GPHNQ9NQX3 736 aaPredicted RBP19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 Q9Y3F1 56 aa19.28■□□□□ 0.68
AC004449.1-201ENST00000564240 ASTN1O14525 1302 aa19.27■□□□□ 0.68
AC004449.1-201ENST00000564240 NFIBO00712 420 aa19.27■□□□□ 0.68
AC004449.1-201ENST00000564240 CTAGE5O15320 804 aa19.27■□□□□ 0.68
AC004449.1-201ENST00000564240 PDHBP11177 359 aa19.27■□□□□ 0.68
AC004449.1-201ENST00000564240 PTGS1P23219 599 aa19.27■□□□□ 0.68
AC004449.1-201ENST00000564240 ALDH5A1P51649 535 aaPredicted RBP19.27■□□□□ 0.68
AC004449.1-201ENST00000564240 PDE4DQ08499 809 aa19.27■□□□□ 0.68
AC004449.1-201ENST00000564240 MAFAQ8NHW3 353 aaPredicted RBP19.27■□□□□ 0.68
AC004449.1-201ENST00000564240 WDR11Q9BZH6 1224 aa19.27■□□□□ 0.68
AC004449.1-201ENST00000564240 B4DLN1 442 aa19.26■□□□□ 0.67
AC004449.1-201ENST00000564240 MYL3P08590 195 aa19.26■□□□□ 0.67
AC004449.1-201ENST00000564240 GOLGA8HP0CJ92 632 aa19.26■□□□□ 0.67
AC004449.1-201ENST00000564240 MRPL12P52815 198 aaKnown RBP19.26■□□□□ 0.67
AC004449.1-201ENST00000564240 PSMC6P62333 389 aa19.26■□□□□ 0.67
AC004449.1-201ENST00000564240 NKX3-2P78367 333 aa19.26■□□□□ 0.67
AC004449.1-201ENST00000564240 ZNF543Q08ER8 600 aa19.26■□□□□ 0.67
AC004449.1-201ENST00000564240 BRDTQ58F21 947 aaPredicted RBP19.26■□□□□ 0.67
AC004449.1-201ENST00000564240 CCDC178Q5BJE1 867 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms