RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 MFSD14AQ96MC6 490 aa21.76■■□□□ 1.07
E4F1-203ENST00000563643 SLF1Q9BQI6 1058 aa21.76■■□□□ 1.07
E4F1-203ENST00000563643 AP5M1Q9H0R1 490 aa21.76■■□□□ 1.07
E4F1-203ENST00000563643 ANTXR1Q9H6X2 564 aa21.76■■□□□ 1.07
E4F1-203ENST00000563643 DBNLQ9UJU6 430 aaKnown RBP21.76■■□□□ 1.07
E4F1-203ENST00000563643 SUPT20HL2P0C7V6 817 aa21.75■■□□□ 1.07
E4F1-203ENST00000563643 C20orf194Q5TEA3 1177 aa21.75■■□□□ 1.07
E4F1-203ENST00000563643 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.75■■□□□ 1.07
E4F1-203ENST00000563643 SSH3Q8TE77 659 aa21.75■■□□□ 1.07
E4F1-203ENST00000563643 CHMP4BQ9H444 224 aaKnown RBP21.75■■□□□ 1.07
E4F1-203ENST00000563643 TLR7Q9NYK1 1049 aaKnown RBP21.75■■□□□ 1.07
E4F1-203ENST00000563643 TNKSO95271 1327 aa21.75■■□□□ 1.07
E4F1-203ENST00000563643 C5orf42Q9H799 3197 aa21.74■■□□□ 1.07
E4F1-203ENST00000563643 SCN5AQ14524 2016 aa21.74■■□□□ 1.07
E4F1-203ENST00000563643 ATP2A1O14983 1001 aa21.74■■□□□ 1.07
E4F1-203ENST00000563643 CPXCR1Q8N123 301 aa21.74■■□□□ 1.07
E4F1-203ENST00000563643 SDR42E1Q8WUS8 393 aa21.74■■□□□ 1.07
E4F1-203ENST00000563643 CCDC17Q96LX7 622 aa21.74■■□□□ 1.07
E4F1-203ENST00000563643 FTOQ9C0B1 505 aaKnown RBP eCLIP21.74■■□□□ 1.07
E4F1-203ENST00000563643 SUGCTQ9HAC7 445 aa21.74■■□□□ 1.07
E4F1-203ENST00000563643 DCP1AQ9NPI6 582 aaPredicted RBP21.74■■□□□ 1.07
E4F1-203ENST00000563643 MTUS1Q9ULD2 1270 aa21.74■■□□□ 1.07
E4F1-203ENST00000563643 DYNC1LI2O43237 492 aaPredicted RBP21.73■■□□□ 1.07
E4F1-203ENST00000563643 PUS10Q3MIT2 529 aaKnown RBP21.73■■□□□ 1.07
E4F1-203ENST00000563643 NUP88Q99567 741 aaPredicted RBP21.73■■□□□ 1.07
E4F1-203ENST00000563643 KANSL2Q9H9L4 492 aa21.73■■□□□ 1.07
E4F1-203ENST00000563643 ZBTB40Q9NUA8 1239 aa21.73■■□□□ 1.07
E4F1-203ENST00000563643 BAIAP3O94812 1187 aa21.72■■□□□ 1.07
E4F1-203ENST00000563643 SMPD1P17405 629 aa21.72■■□□□ 1.07
E4F1-203ENST00000563643 CNTN2Q02246 1040 aa21.72■■□□□ 1.07
E4F1-203ENST00000563643 OS9Q13438 667 aaPredicted RBP21.72■■□□□ 1.07
E4F1-203ENST00000563643 CEP85Q6P2H3 762 aa21.72■■□□□ 1.07
E4F1-203ENST00000563643 PRSS33Q8NF86 280 aa21.72■■□□□ 1.07
E4F1-203ENST00000563643 FBXO40Q9UH90 709 aa21.72■■□□□ 1.07
E4F1-203ENST00000563643 ZFHX2Q9C0A1 2572 aaPredicted RBP21.72■■□□□ 1.07
E4F1-203ENST00000563643 SPTBN4Q9H254 2564 aa21.71■■□□□ 1.07
E4F1-203ENST00000563643 IQCF3P0C7M6 154 aa21.71■■□□□ 1.07
E4F1-203ENST00000563643 KCNJ6P48051 423 aa21.71■■□□□ 1.07
E4F1-203ENST00000563643 ZP2Q05996 745 aa21.71■■□□□ 1.07
E4F1-203ENST00000563643 NEK9Q8TD19 979 aa21.71■■□□□ 1.07
E4F1-203ENST00000563643 RAVER2Q9HCJ3 691 aaKnown RBP21.71■■□□□ 1.07
E4F1-203ENST00000563643 H3BQ06 376 aaPredicted RBP21.7■■□□□ 1.06
E4F1-203ENST00000563643 PITPNM1O00562 1244 aa21.7■■□□□ 1.06
E4F1-203ENST00000563643 PTPN5P54829 565 aa21.7■■□□□ 1.06
E4F1-203ENST00000563643 RRP1P56182 461 aaKnown RBP21.7■■□□□ 1.06
E4F1-203ENST00000563643 TMCO2Q7Z6W1 182 aaPredicted RBP21.7■■□□□ 1.06
E4F1-203ENST00000563643 PRPF38AQ8NAV1 312 aaKnown RBP21.7■■□□□ 1.06
E4F1-203ENST00000563643 ZBED2Q9BTP6 218 aa21.7■■□□□ 1.06
E4F1-203ENST00000563643 MYH8P13535 1937 aa21.69■■□□□ 1.06
E4F1-203ENST00000563643 ZBED4O75132 1171 aa21.69■■□□□ 1.06
E4F1-203ENST00000563643 CDK8P49336 464 aa21.69■■□□□ 1.06
E4F1-203ENST00000563643 ERVK-21P61565 698 aa21.69■■□□□ 1.06
E4F1-203ENST00000563643 FAM133AQ8N9E0 248 aa21.69■■□□□ 1.06
E4F1-203ENST00000563643 CHST13Q8NET6 341 aa21.69■■□□□ 1.06
E4F1-203ENST00000563643 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.69■■□□□ 1.06
E4F1-203ENST00000563643 TGS1Q96RS0 853 aaKnown RBP21.69■■□□□ 1.06
E4F1-203ENST00000563643 CCDC8Q9H0W5 538 aaPredicted RBP21.69■■□□□ 1.06
E4F1-203ENST00000563643 CTDP1Q9Y5B0 961 aaPredicted RBP21.69■■□□□ 1.06
E4F1-203ENST00000563643 WDR5P61964 334 aaKnown RBP21.68■■□□□ 1.06
E4F1-203ENST00000563643 TMEM63BQ5T3F8 832 aa21.68■■□□□ 1.06
E4F1-203ENST00000563643 LCORLQ8N3X6 602 aa21.68■■□□□ 1.06
E4F1-203ENST00000563643 RETREG2Q8NC44 543 aa21.68■■□□□ 1.06
E4F1-203ENST00000563643 PRKAG3Q9UGI9 489 aa21.68■■□□□ 1.06
E4F1-203ENST00000563643 NOP58Q9Y2X3 529 aaKnown RBP21.68■■□□□ 1.06
E4F1-203ENST00000563643 Q9Y3F1 56 aa21.68■■□□□ 1.06
E4F1-203ENST00000563643 TANC1Q9C0D5 1861 aa21.68■■□□□ 1.06
E4F1-203ENST00000563643 MYO15AQ9UKN7 3530 aa21.68■■□□□ 1.06
E4F1-203ENST00000563643 C19orf67A6NJJ6 358 aa21.67■■□□□ 1.06
E4F1-203ENST00000563643 RPAP2Q8IXW5 612 aaPredicted RBP21.67■■□□□ 1.06
E4F1-203ENST00000563643 SLC38A10Q9HBR0 1119 aa21.67■■□□□ 1.06
E4F1-203ENST00000563643 PDGFCQ9NRA1 345 aa21.67■■□□□ 1.06
E4F1-203ENST00000563643 HOMER2Q9NSB8 354 aa21.67■■□□□ 1.06
E4F1-203ENST00000563643 PTPRSQ13332 1948 aa21.67■■□□□ 1.06
E4F1-203ENST00000563643 ASB14A6NK59 587 aa21.66■■□□□ 1.06
E4F1-203ENST00000563643 GFRA3O60609 400 aa21.66■■□□□ 1.06
E4F1-203ENST00000563643 SURF6O75683 361 aaKnown RBP21.66■■□□□ 1.06
E4F1-203ENST00000563643 PDE6AP16499 860 aa21.66■■□□□ 1.06
E4F1-203ENST00000563643 SLC9C2Q5TAH2 1124 aa21.66■■□□□ 1.06
E4F1-203ENST00000563643 ADHFE1Q8IWW8 467 aa21.66■■□□□ 1.06
E4F1-203ENST00000563643 KIFC2Q96AC6 838 aa21.66■■□□□ 1.06
E4F1-203ENST00000563643 UPF3BQ9BZI7 483 aaKnown RBP21.66■■□□□ 1.06
E4F1-203ENST00000563643 FAM50BQ9Y247 325 aa21.66■■□□□ 1.06
E4F1-203ENST00000563643 DDX49Q9Y6V7 483 aaKnown RBP21.66■■□□□ 1.06
E4F1-203ENST00000563643 CYP2D7A0A087X1C5 515 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 LINC01553A4QN01 128 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 SOWAHBA6NEL2 793 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 IRS1P35568 1242 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 DEFB103AP81534 67 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 PURAQ00577 322 aaKnown RBP21.65■■□□□ 1.06
E4F1-203ENST00000563643 FAM47CQ5HY64 1035 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 IER5LQ5T953 404 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 IQSEC1Q6DN90 963 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 TAPT1Q6NXT6 567 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 C16orf86Q6ZW13 317 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 EEPD1Q7L9B9 569 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 FBXO16Q8IX29 292 aaPredicted RBP21.65■■□□□ 1.06
E4F1-203ENST00000563643 EAF2Q96CJ1 260 aaPredicted RBP21.65■■□□□ 1.06
E4F1-203ENST00000563643 POLR3EQ9NVU0 708 aa21.65■■□□□ 1.06
E4F1-203ENST00000563643 HMMRO75330 724 aa21.64■■□□□ 1.05
E4F1-203ENST00000563643 NDUFB10O96000 172 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms