RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 CHST3Q7LGC8 479 aa21.79■■□□□ 1.08
PKD1-223ENST00000561668 FAM133AQ8N9E0 248 aa21.79■■□□□ 1.08
PKD1-223ENST00000561668 SENP6Q9GZR1 1112 aaPredicted RBP21.79■■□□□ 1.08
PKD1-223ENST00000561668 CYP39A1Q9NYL5 469 aa21.79■■□□□ 1.08
PKD1-223ENST00000561668 ZHX1Q9UKY1 873 aaPredicted RBP21.79■■□□□ 1.08
PKD1-223ENST00000561668 PTPDC1A2A3K4 754 aa21.78■■□□□ 1.08
PKD1-223ENST00000561668 SNAI1O95863 264 aaPredicted RBP21.78■■□□□ 1.08
PKD1-223ENST00000561668 ZNF865P0CJ78 1059 aaPredicted RBP21.78■■□□□ 1.08
PKD1-223ENST00000561668 TAL1P17542 331 aaPredicted RBP21.78■■□□□ 1.08
PKD1-223ENST00000561668 EXOSC10Q01780 885 aaKnown RBP21.78■■□□□ 1.08
PKD1-223ENST00000561668 ACVR2BQ13705 512 aa21.78■■□□□ 1.08
PKD1-223ENST00000561668 GJC2Q5T442 439 aaPredicted RBP21.78■■□□□ 1.08
PKD1-223ENST00000561668 CATIPQ7Z7H3 387 aa21.78■■□□□ 1.08
PKD1-223ENST00000561668 CCDC144CPQ8IYA2 1237 aa21.78■■□□□ 1.08
PKD1-223ENST00000561668 ADGRF4Q8IZF3 695 aa21.78■■□□□ 1.08
PKD1-223ENST00000561668 TMEM87BQ96K49 555 aa21.78■■□□□ 1.08
PKD1-223ENST00000561668 NEK1Q96PY6 1258 aa21.78■■□□□ 1.08
PKD1-223ENST00000561668 XPNPEP3Q9NQH7 507 aa21.78■■□□□ 1.08
PKD1-223ENST00000561668 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.78■■□□□ 1.08
PKD1-223ENST00000561668 ADD3Q9UEY8 706 aaKnown RBP21.78■■□□□ 1.08
PKD1-223ENST00000561668 EIF5BO60841 1220 aaKnown RBP21.77■■□□□ 1.08
PKD1-223ENST00000561668 LIFRP42702 1097 aa21.77■■□□□ 1.08
PKD1-223ENST00000561668 BAATQ14032 418 aaPredicted RBP21.77■■□□□ 1.08
PKD1-223ENST00000561668 ADCK5Q3MIX3 580 aa21.77■■□□□ 1.08
PKD1-223ENST00000561668 USH1GQ495M9 461 aa21.77■■□□□ 1.08
PKD1-223ENST00000561668 ARMCX2Q7L311 632 aa21.77■■□□□ 1.08
PKD1-223ENST00000561668 RNF180Q86T96 592 aa21.77■■□□□ 1.08
PKD1-223ENST00000561668 TMTC2Q8N394 836 aa21.77■■□□□ 1.08
PKD1-223ENST00000561668 CPVLQ9H3G5 476 aa21.77■■□□□ 1.08
PKD1-223ENST00000561668 SNX14Q9Y5W7 946 aa21.77■■□□□ 1.08
PKD1-223ENST00000561668 MKI67P46013 3256 aaKnown RBP21.76■■□□□ 1.07
PKD1-223ENST00000561668 KLRF2D3W0D1 207 aa21.76■■□□□ 1.07
PKD1-223ENST00000561668 COL6A1P12109 1028 aa21.76■■□□□ 1.07
PKD1-223ENST00000561668 CDC37Q16543 378 aaPredicted RBP21.76■■□□□ 1.07
PKD1-223ENST00000561668 RNF207Q6ZRF8 634 aa21.76■■□□□ 1.07
PKD1-223ENST00000561668 IL17RAQ96F46 866 aa21.76■■□□□ 1.07
PKD1-223ENST00000561668 MPHOSPH6Q99547 160 aaKnown RBP21.76■■□□□ 1.07
PKD1-223ENST00000561668 LY9Q9HBG7 655 aa21.76■■□□□ 1.07
PKD1-223ENST00000561668 SOWAHBA6NEL2 793 aa21.75■■□□□ 1.07
PKD1-223ENST00000561668 NFIBO00712 420 aa21.75■■□□□ 1.07
PKD1-223ENST00000561668 PRC1O43663 620 aa21.75■■□□□ 1.07
PKD1-223ENST00000561668 HMGB1P09429 215 aaKnown RBP21.75■■□□□ 1.07
PKD1-223ENST00000561668 CALML3P27482 149 aa21.75■■□□□ 1.07
PKD1-223ENST00000561668 TROAPQ12815 778 aa21.75■■□□□ 1.07
PKD1-223ENST00000561668 NFXL1Q6ZNB6 911 aa21.75■■□□□ 1.07
PKD1-223ENST00000561668 DHX32Q7L7V1 743 aaKnown RBP21.75■■□□□ 1.07
PKD1-223ENST00000561668 FBXL16Q8N461 479 aa21.75■■□□□ 1.07
PKD1-223ENST00000561668 MAP3K14Q99558 947 aa21.75■■□□□ 1.07
PKD1-223ENST00000561668 SPC25Q9HBM1 224 aa21.75■■□□□ 1.07
PKD1-223ENST00000561668 SENP2Q9HC62 589 aa21.75■■□□□ 1.07
PKD1-223ENST00000561668 B4DLN1 442 aa21.74■■□□□ 1.07
PKD1-223ENST00000561668 SH2B2O14492 632 aaPredicted RBP21.74■■□□□ 1.07
PKD1-223ENST00000561668 MRPL12P52815 198 aaKnown RBP21.74■■□□□ 1.07
PKD1-223ENST00000561668 LRRC41Q15345 812 aa21.74■■□□□ 1.07
PKD1-223ENST00000561668 NOL8Q76FK4 1167 aaKnown RBP21.74■■□□□ 1.07
PKD1-223ENST00000561668 SGMS1Q86VZ5 419 aa21.74■■□□□ 1.07
PKD1-223ENST00000561668 FBXO11Q86XK2 927 aa21.74■■□□□ 1.07
PKD1-223ENST00000561668 MCF2L2Q86YR7 1114 aa21.74■■□□□ 1.07
PKD1-223ENST00000561668 C7orf61Q8IZ16 206 aa21.74■■□□□ 1.07
PKD1-223ENST00000561668 STAG2Q8N3U4 1231 aa21.74■■□□□ 1.07
PKD1-223ENST00000561668 JMJD4Q9H9V9 463 aa21.74■■□□□ 1.07
PKD1-223ENST00000561668 MAD2L2Q9UI95 211 aa21.74■■□□□ 1.07
PKD1-223ENST00000561668 ABCB11O95342 1321 aa21.74■■□□□ 1.07
PKD1-223ENST00000561668 PALM3A6NDB9 673 aaPredicted RBP21.73■■□□□ 1.07
PKD1-223ENST00000561668 CCDC69A6NI79 296 aa21.73■■□□□ 1.07
PKD1-223ENST00000561668 TRAF1Q13077 416 aa21.73■■□□□ 1.07
PKD1-223ENST00000561668 CCDC144BQ3MJ40 725 aa21.73■■□□□ 1.07
PKD1-223ENST00000561668 RGS22Q8NE09 1264 aa21.73■■□□□ 1.07
PKD1-223ENST00000561668 NUP133Q8WUM0 1156 aa21.73■■□□□ 1.07
PKD1-223ENST00000561668 CLEC4DQ8WXI8 215 aa21.73■■□□□ 1.07
PKD1-223ENST00000561668 FGD4Q96M96 766 aa21.73■■□□□ 1.07
PKD1-223ENST00000561668 MAF1Q9H063 256 aa21.73■■□□□ 1.07
PKD1-223ENST00000561668 MRPL11Q9Y3B7 192 aaKnown RBP21.73■■□□□ 1.07
PKD1-223ENST00000561668 LOC102724159A0A0B4J2E5 919 aa21.72■■□□□ 1.07
PKD1-223ENST00000561668 DUSP11O75319 330 aaKnown RBP21.72■■□□□ 1.07
PKD1-223ENST00000561668 PGK1P00558 417 aa21.72■■□□□ 1.07
PKD1-223ENST00000561668 GRM4Q14833 912 aa21.72■■□□□ 1.07
PKD1-223ENST00000561668 PWP2Q15269 919 aaKnown RBP21.72■■□□□ 1.07
PKD1-223ENST00000561668 QRICH1Q2TAL8 776 aa21.72■■□□□ 1.07
PKD1-223ENST00000561668 AMNQ9BXJ7 453 aa21.72■■□□□ 1.07
PKD1-223ENST00000561668 SMCHD1A6NHR9 2005 aa21.72■■□□□ 1.07
PKD1-223ENST00000561668 KIF5BP33176 963 aa21.71■■□□□ 1.07
PKD1-223ENST00000561668 ADCYAP1R1P41586 468 aa21.71■■□□□ 1.07
PKD1-223ENST00000561668 ATN1P54259 1190 aaPredicted RBP21.71■■□□□ 1.07
PKD1-223ENST00000561668 RPS6P62753 249 aaKnown RBP21.71■■□□□ 1.07
PKD1-223ENST00000561668 C8orf34Q49A92 452 aa21.71■■□□□ 1.07
PKD1-223ENST00000561668 CTCFLQ8NI51 663 aaPredicted RBP21.71■■□□□ 1.07
PKD1-223ENST00000561668 AGXT2Q9BYV1 514 aa21.71■■□□□ 1.07
PKD1-223ENST00000561668 TM6SF1Q9BZW5 370 aa21.71■■□□□ 1.07
PKD1-223ENST00000561668 GPHNQ9NQX3 736 aaPredicted RBP21.71■■□□□ 1.07
PKD1-223ENST00000561668 GTF3C3Q9Y5Q9 886 aa21.71■■□□□ 1.07
PKD1-223ENST00000561668 FRMPD3Q5JV73 1810 aa21.71■■□□□ 1.07
PKD1-223ENST00000561668 ZBTB5O15062 677 aa21.7■■□□□ 1.06
PKD1-223ENST00000561668 TNFAIP2Q03169 654 aa21.7■■□□□ 1.06
PKD1-223ENST00000561668 LRRC26Q2I0M4 334 aa21.7■■□□□ 1.06
PKD1-223ENST00000561668 EEPD1Q7L9B9 569 aa21.7■■□□□ 1.06
PKD1-223ENST00000561668 FERMT2Q96AC1 680 aa21.7■■□□□ 1.06
PKD1-223ENST00000561668 MTMR8Q96EF0 704 aa21.7■■□□□ 1.06
PKD1-223ENST00000561668 PURBQ96QR8 312 aaKnown RBP21.7■■□□□ 1.06
PKD1-223ENST00000561668 DDAH1O94760 285 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms