RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 PWP2Q15269 919 aaKnown RBP13.41□□□□□ -0.26
HERC1-214ENST00000561400 QRICH1Q2TAL8 776 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 LBX2Q6XYB7 198 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 REPS2Q8NFH8 660 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 SMARCC2Q8TAQ2 1214 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 DDX11Q96FC9 970 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 LLPHQ9BRT6 129 aaKnown RBP13.41□□□□□ -0.26
HERC1-214ENST00000561400 ZNF536O15090 1300 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 PRPF3O43395 683 aaKnown RBP13.41□□□□□ -0.26
HERC1-214ENST00000561400 ZNF500O60304 480 aaPredicted RBP13.41□□□□□ -0.26
HERC1-214ENST00000561400 PPP1R11O60927 126 aaPredicted RBP13.41□□□□□ -0.26
HERC1-214ENST00000561400 CDKL5O76039 1030 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 SSRP1Q08945 709 aaKnown RBP13.41□□□□□ -0.26
HERC1-214ENST00000561400 BECN1Q14457 450 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 TAF1CQ15572 869 aaPredicted RBP13.41□□□□□ -0.26
HERC1-214ENST00000561400 PKN1Q16512 942 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 CDC37Q16543 378 aaPredicted RBP13.41□□□□□ -0.26
HERC1-214ENST00000561400 OTUD7BQ6GQQ9 843 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 DNAJC5GQ8N7S2 189 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 RRP36Q96EU6 259 aaKnown RBP13.41□□□□□ -0.26
HERC1-214ENST00000561400 TXNRD2Q9NNW7 524 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 BTBD7Q9P203 1132 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 RBPJLQ9UBG7 517 aa13.41□□□□□ -0.26
HERC1-214ENST00000561400 ZNF214Q9UL59 606 aaPredicted RBP13.41□□□□□ -0.26
HERC1-214ENST00000561400 ZBTB5O15062 677 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 TAL1P17542 331 aaPredicted RBP13.4□□□□□ -0.26
HERC1-214ENST00000561400 MAP2K1Q02750 393 aaPredicted RBP13.4□□□□□ -0.26
HERC1-214ENST00000561400 TMEM132BQ14DG7 1078 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 CCDC174Q6PII3 467 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
HERC1-214ENST00000561400 CPXCR1Q8N123 301 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 SPRYD3Q8NCJ5 442 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 SMCR8Q8TEV9 937 aaPredicted RBP13.4□□□□□ -0.26
HERC1-214ENST00000561400 AIFM3Q96NN9 605 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 PARK7Q99497 189 aaKnown RBP13.4□□□□□ -0.26
HERC1-214ENST00000561400 ORC3Q9UBD5 711 aaPredicted RBP13.4□□□□□ -0.26
HERC1-214ENST00000561400 PNMA6FA0A0J9YX94 578 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 ZBED4O75132 1171 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 CNMDO75829 334 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 TRIM22Q8IYM9 498 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 INTS4Q96HW7 963 aaKnown RBP13.4□□□□□ -0.26
HERC1-214ENST00000561400 PAGR1Q9BTK6 254 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 EFCC1Q9HA90 598 aa13.4□□□□□ -0.26
HERC1-214ENST00000561400 RAVER2Q9HCJ3 691 aaKnown RBP13.4□□□□□ -0.26
HERC1-214ENST00000561400 ADGRA2Q96PE1 1338 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 STK36Q9NRP7 1315 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 FDX1P10109 184 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 CRHR2Q13324 411 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 PFKFB3Q16875 520 aaPredicted RBP13.39□□□□□ -0.27
HERC1-214ENST00000561400 ZBTB9Q96C00 473 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 AGBL1Q96MI9 1066 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 R3HDMLQ9H3Y0 253 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 SEC63Q9UGP8 760 aaKnown RBP13.39□□□□□ -0.27
HERC1-214ENST00000561400 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
HERC1-214ENST00000561400 CA12O43570 354 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 DEXIO95424 95 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 SCG2P13521 617 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 AKAP17AQ02040 695 aaKnown RBP13.39□□□□□ -0.27
HERC1-214ENST00000561400 Q3C1V9 767 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 ANKRD13CQ8N6S4 541 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 MB21D1Q8N884 522 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 GPKOWQ92917 476 aaPredicted RBP eCLIP13.39□□□□□ -0.272e-6■■■■□ 26.1
HERC1-214ENST00000561400 COA7Q96BR5 231 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 SHISA4Q96DD7 197 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 TSPYL1Q9H0U9 437 aa13.39□□□□□ -0.27
HERC1-214ENST00000561400 TLR2O60603 784 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 ALDH1A1P00352 501 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 ICAM1P05362 532 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 GJB2P29033 226 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 USH1GQ495M9 461 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 WWC2Q6AWC2 1192 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 TYW1BQ6NUM6 668 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 FBXO11Q86XK2 927 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 GJB4Q9NTQ9 266 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 RBM27Q9P2N5 1060 aaKnown RBP13.38□□□□□ -0.27
HERC1-214ENST00000561400 SMC3Q9UQE7 1217 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 RABGAP1Q9Y3P9 1069 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 RIPK3Q9Y572 518 aa13.38□□□□□ -0.27
HERC1-214ENST00000561400 CTDP1Q9Y5B0 961 aaPredicted RBP13.38□□□□□ -0.27
HERC1-214ENST00000561400 ATP2A1O14983 1001 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 TRPA1O75762 1119 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 GCLCP48506 637 aaPredicted RBP13.37□□□□□ -0.27
HERC1-214ENST00000561400 HMGN5P82970 282 aaKnown RBP13.37□□□□□ -0.27
HERC1-214ENST00000561400 PLS1Q14651 629 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 AMNQ9BXJ7 453 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 PANK2Q9BZ23 570 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 ZFYVE28Q9HCC9 887 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 RNF186Q9NXI6 227 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 CPA4Q9UI42 421 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 STAT3P40763 770 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 OAZ1P54368 228 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 ERVK-9P63128 1117 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 ERVK-24P63145 666 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 SNRNP48Q6IEG0 339 aaKnown RBP13.37□□□□□ -0.27
HERC1-214ENST00000561400 C17orf99Q6UX52 265 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 HEATR3Q7Z4Q2 680 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 GTF3C2Q8WUA4 911 aaPredicted RBP13.37□□□□□ -0.27
HERC1-214ENST00000561400 TEX13BQ9BXU2 312 aa13.37□□□□□ -0.27
HERC1-214ENST00000561400 SPATC1LQ9H0A9 340 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms