RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 CCDC144BQ3MJ40 725 aa11.55□□□□□ -0.56
PPP1R3E-204ENST00000559942 MSLNLQ96KJ4 702 aa11.55□□□□□ -0.56
PPP1R3E-204ENST00000559942 TRIM34Q9BYJ4 488 aa11.55□□□□□ -0.56
PPP1R3E-204ENST00000559942 INCENPQ9NQS7 918 aa11.55□□□□□ -0.56
PPP1R3E-204ENST00000559942 INSL6Q9Y581 213 aa11.55□□□□□ -0.56
PPP1R3E-204ENST00000559942 ATG2AQ2TAZ0 1938 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 FANCMQ8IYD8 2048 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 GPR75-ASB3A0A0A6YYF3 556 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 SLC25A27O95847 323 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 PROS1P07225 676 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 PHKA1P46020 1223 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 NDUFV1P49821 464 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 ADAM15Q13444 863 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 ACVR2BQ13705 512 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 PPM1JQ5JR12 505 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 FOXP4Q8IVH2 680 aaPredicted RBP11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 CCDC105Q8IYK2 499 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 UBALD2Q8IYN6 164 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 CRIPAKQ8N1N5 446 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 GPR161Q8N6U8 529 aaKnown RBP11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 ANKRD44Q8N8A2 993 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 SRCIN1Q9C0H9 1055 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 KIAA1683Q9H0B3 1180 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 GNL3LQ9NVN8 582 aaKnown RBP11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 DENND2AQ9ULE3 1009 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 MROH7-TTC4A0A0A0MT08 1334 aa11.54□□□□□ -0.56
PPP1R3E-204ENST00000559942 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 TANC1Q9C0D5 1861 aa11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 PITPNM1O00562 1244 aa11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 LINC01565O15544 149 aa11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 ZEB2O60315 1214 aa11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 ALDH1L1O75891 902 aa11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 GH2P01242 217 aa11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 GTF2F1P35269 517 aaKnown RBP eCLIP11.53□□□□□ -0.561e-7■■■■■ 64.6
PPP1R3E-204ENST00000559942 ZGPATQ8N5A5 531 aaKnown RBP11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 SMRP1Q8NCR6 262 aa11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 DHX36Q9H2U1 1008 aaKnown RBP11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 DNAJC18Q9H819 358 aa11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 ZMIZ1Q9ULJ6 1067 aa11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 NLRC5Q86WI3 1866 aa11.53□□□□□ -0.56
PPP1R3E-204ENST00000559942 MAP4K4O95819 1239 aaPredicted RBP11.52□□□□□ -0.57
PPP1R3E-204ENST00000559942 RABL6Q3YEC7 729 aaPredicted RBP11.52□□□□□ -0.57
PPP1R3E-204ENST00000559942 MAMDC4Q6UXC1 1216 aa11.52□□□□□ -0.57
PPP1R3E-204ENST00000559942 KREMEN2Q8NCW0 462 aa11.52□□□□□ -0.57
PPP1R3E-204ENST00000559942 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.52□□□□□ -0.57
PPP1R3E-204ENST00000559942 ABHD16BQ9H3Z7 469 aa11.52□□□□□ -0.57
PPP1R3E-204ENST00000559942 USP15Q9Y4E8 981 aaPredicted RBP11.52□□□□□ -0.57
PPP1R3E-204ENST00000559942 USP9XQ93008 2570 aaPredicted RBP11.52□□□□□ -0.57
PPP1R3E-204ENST00000559942 CEP295Q9C0D2 2601 aa11.52□□□□□ -0.57
PPP1R3E-204ENST00000559942 EYA2O00167 538 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 VAMP4O75379 141 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 MECOMQ03112 1051 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 LMNB2Q03252 620 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 COASYQ13057 564 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 MTMR3Q13615 1198 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 FSCN1Q16658 493 aaKnown RBP11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 ATP2B3Q16720 1220 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 ZC3H14Q6PJT7 736 aaKnown RBP11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 NOL8Q76FK4 1167 aaKnown RBP11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 TMEM192Q8IY95 271 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 DTWD2Q8NBA8 298 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 ACER1Q8TDN7 264 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 TANGO6Q9C0B7 1094 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 MICAL3Q7RTP6 2002 aa11.51□□□□□ -0.57
PPP1R3E-204ENST00000559942 ABHD14A-ACY1A0A1B0GW23 586 aa11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 ADORA1P30542 326 aa11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 ZNF200P98182 395 aaPredicted RBP11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 BFSP2Q13515 415 aa11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 RAB3GAP1Q15042 981 aa11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 CNKSR3Q6P9H4 555 aa11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 METTL16Q86W50 562 aaKnown RBP11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 FLCNQ8NFG4 579 aa11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 CLEC1BQ9P126 229 aa11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 LHX6Q9UPM6 363 aa11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 ZZEF1O43149 2961 aa11.5□□□□□ -0.57
PPP1R3E-204ENST00000559942 SPEGQ15772 3267 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 SEMA3EO15041 775 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 PI15O43692 258 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 BRD1O95696 1058 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 ATF7P17544 494 aaPredicted RBP11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 AOC1P19801 751 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 RASGRF1Q13972 1273 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 LRRFIP1Q32MZ4 808 aaKnown RBP11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 ERICH6Q7L0X2 663 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 FBXO11Q86XK2 927 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 TEX11Q8IYF3 940 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 SP7Q8TDD2 431 aaPredicted RBP11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 ZNF384Q8TF68 577 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 NCDNQ9UBB6 729 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 SORCS3Q9UPU3 1222 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 ASTN1O14525 1302 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 FANCIQ9NVI1 1328 aa11.49□□□□□ -0.57
PPP1R3E-204ENST00000559942 TAF4O00268 1085 aa11.48□□□□□ -0.57
PPP1R3E-204ENST00000559942 EFCAB14O75071 495 aa11.48□□□□□ -0.57
PPP1R3E-204ENST00000559942 HTRA4P83105 476 aaPredicted RBP11.48□□□□□ -0.57
PPP1R3E-204ENST00000559942 TNFAIP2Q03169 654 aa11.48□□□□□ -0.57
PPP1R3E-204ENST00000559942 EXOSC9Q06265 439 aaKnown RBP11.48□□□□□ -0.57
PPP1R3E-204ENST00000559942 RING1Q06587 406 aa11.48□□□□□ -0.57
PPP1R3E-204ENST00000559942 TMEM132BQ14DG7 1078 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms