RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 SNX17Q15036 470 aa20.58■□□□□ 0.89
SMAD3-210ENST00000559092 BMP2KLQ5H9B9 411 aa20.58■□□□□ 0.89
SMAD3-210ENST00000559092 RGS22Q8NE09 1264 aa20.58■□□□□ 0.89
SMAD3-210ENST00000559092 CLEC4DQ8WXI8 215 aa20.58■□□□□ 0.89
SMAD3-210ENST00000559092 SPC25Q9HBM1 224 aa20.58■□□□□ 0.89
SMAD3-210ENST00000559092 E7EWF7 191 aa20.57■□□□□ 0.88
SMAD3-210ENST00000559092 FXR1P51114 621 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMAD3-210ENST00000559092 BAATQ14032 418 aaPredicted RBP20.57■□□□□ 0.88
SMAD3-210ENST00000559092 CYB5R4Q7L1T6 521 aa20.57■□□□□ 0.88
SMAD3-210ENST00000559092 RALYLQ86SE5 291 aaKnown RBP20.57■□□□□ 0.88
SMAD3-210ENST00000559092 KLHDC9Q8NEP7 349 aa20.57■□□□□ 0.88
SMAD3-210ENST00000559092 NCOA7Q8NI08 942 aa20.57■□□□□ 0.88
SMAD3-210ENST00000559092 MORC4Q8TE76 937 aa20.57■□□□□ 0.88
SMAD3-210ENST00000559092 UBA5Q9GZZ9 404 aa20.57■□□□□ 0.88
SMAD3-210ENST00000559092 ZNFX1Q9P2E3 1918 aaKnown RBP20.57■□□□□ 0.88
SMAD3-210ENST00000559092 SYNRGQ9UMZ2 1314 aa20.56■□□□□ 0.88
SMAD3-210ENST00000559092 MOXD2PA6NHM9 499 aa20.56■□□□□ 0.88
SMAD3-210ENST00000559092 NFIBO00712 420 aa20.56■□□□□ 0.88
SMAD3-210ENST00000559092 SYN1P17600 705 aa20.56■□□□□ 0.88
SMAD3-210ENST00000559092 CST5P28325 142 aaPredicted RBP20.56■□□□□ 0.88
SMAD3-210ENST00000559092 RTP1P59025 263 aa20.56■□□□□ 0.88
SMAD3-210ENST00000559092 SART3Q15020 963 aaKnown RBP20.56■□□□□ 0.88
SMAD3-210ENST00000559092 ADGRF4Q8IZF3 695 aa20.56■□□□□ 0.88
SMAD3-210ENST00000559092 DNAH12Q6ZR08 3092 aa20.56■□□□□ 0.88
SMAD3-210ENST00000559092 ASTN1O14525 1302 aa20.55■□□□□ 0.88
SMAD3-210ENST00000559092 ERICH2A1L162 156 aa20.55■□□□□ 0.88
SMAD3-210ENST00000559092 GJA9P57773 515 aa20.55■□□□□ 0.88
SMAD3-210ENST00000559092 NKX3-2P78367 333 aa20.55■□□□□ 0.88
SMAD3-210ENST00000559092 IQSEC1Q6DN90 963 aa20.55■□□□□ 0.88
SMAD3-210ENST00000559092 CCSAPQ6IQ19 270 aaPredicted RBP20.55■□□□□ 0.88
SMAD3-210ENST00000559092 RNF207Q6ZRF8 634 aa20.55■□□□□ 0.88
SMAD3-210ENST00000559092 NUP133Q8WUM0 1156 aa20.55■□□□□ 0.88
SMAD3-210ENST00000559092 FERMT2Q96AC1 680 aa20.55■□□□□ 0.88
SMAD3-210ENST00000559092 LENG1Q96BZ8 264 aaPredicted RBP20.55■□□□□ 0.88
SMAD3-210ENST00000559092 ESYT1Q9BSJ8 1104 aa20.55■□□□□ 0.88
SMAD3-210ENST00000559092 UPF3AQ9H1J1 476 aaKnown RBP20.55■□□□□ 0.88
SMAD3-210ENST00000559092 RBM8AQ9Y5S9 174 aaKnown RBP20.55■□□□□ 0.88
SMAD3-210ENST00000559092 PTPDC1A2A3K4 754 aa20.54■□□□□ 0.88
SMAD3-210ENST00000559092 IFIT3O14879 490 aaKnown RBP20.54■□□□□ 0.88
SMAD3-210ENST00000559092 MAGEA10P43363 369 aaPredicted RBP20.54■□□□□ 0.88
SMAD3-210ENST00000559092 ACLYP53396 1101 aa20.54■□□□□ 0.88
SMAD3-210ENST00000559092 TNFAIP2Q03169 654 aa20.54■□□□□ 0.88
SMAD3-210ENST00000559092 CDC37Q16543 378 aaPredicted RBP20.54■□□□□ 0.88
SMAD3-210ENST00000559092 PCSK9Q8NBP7 692 aaKnown RBP20.54■□□□□ 0.88
SMAD3-210ENST00000559092 MPHOSPH6Q99547 160 aaKnown RBP20.54■□□□□ 0.88
SMAD3-210ENST00000559092 LSG1Q9H089 658 aaKnown RBP20.54■□□□□ 0.88
SMAD3-210ENST00000559092 VTA1Q9NP79 307 aa20.54■□□□□ 0.88
SMAD3-210ENST00000559092 PRKAG2Q9UGJ0 569 aa20.54■□□□□ 0.88
SMAD3-210ENST00000559092 ATP11BQ9Y2G3 1177 aa20.54■□□□□ 0.88
SMAD3-210ENST00000559092 LAMA4Q16363 1823 aa20.54■□□□□ 0.88
SMAD3-210ENST00000559092 A0A1W2PQ45 241 aaPredicted RBP20.53■□□□□ 0.88
SMAD3-210ENST00000559092 A0A1W2PQY0 241 aa20.53■□□□□ 0.88
SMAD3-210ENST00000559092 RPS6P62753 249 aaKnown RBP20.53■□□□□ 0.88
SMAD3-210ENST00000559092 KCNA10Q16322 511 aa20.53■□□□□ 0.88
SMAD3-210ENST00000559092 DNERQ8NFT8 737 aa20.53■□□□□ 0.88
SMAD3-210ENST00000559092 MTA3Q9BTC8 594 aa20.53■□□□□ 0.88
SMAD3-210ENST00000559092 CPVLQ9H3G5 476 aa20.53■□□□□ 0.88
SMAD3-210ENST00000559092 JMJD4Q9H9V9 463 aa20.53■□□□□ 0.88
SMAD3-210ENST00000559092 Q9Y3F1 56 aa20.53■□□□□ 0.88
SMAD3-210ENST00000559092 TRIOBPQ9H2D6 2365 aa20.53■□□□□ 0.88
SMAD3-210ENST00000559092 ABCB11O95342 1321 aa20.53■□□□□ 0.88
SMAD3-210ENST00000559092 PALM3A6NDB9 673 aaPredicted RBP20.52■□□□□ 0.88
SMAD3-210ENST00000559092 B4DLN1 442 aa20.52■□□□□ 0.88
SMAD3-210ENST00000559092 KLRF2D3W0D1 207 aa20.52■□□□□ 0.88
SMAD3-210ENST00000559092 ADCY6O43306 1168 aa20.52■□□□□ 0.88
SMAD3-210ENST00000559092 C6orf222P0C671 652 aaPredicted RBP20.52■□□□□ 0.88
SMAD3-210ENST00000559092 ALDH5A1P51649 535 aaPredicted RBP20.52■□□□□ 0.88
SMAD3-210ENST00000559092 MRPL12P52815 198 aaKnown RBP20.52■□□□□ 0.88
SMAD3-210ENST00000559092 WTAPQ15007 396 aa20.52■□□□□ 0.88
SMAD3-210ENST00000559092 TRIM60Q495X7 471 aa20.52■□□□□ 0.88
SMAD3-210ENST00000559092 TAPT1Q6NXT6 567 aa20.52■□□□□ 0.88
SMAD3-210ENST00000559092 STOX1Q6ZVD7 989 aa20.52■□□□□ 0.88
SMAD3-210ENST00000559092 MCF2L2Q86YR7 1114 aa20.52■□□□□ 0.88
SMAD3-210ENST00000559092 GNEQ9Y223 722 aaKnown RBP20.52■□□□□ 0.88
SMAD3-210ENST00000559092 TAF6LQ9Y6J9 622 aa20.52■□□□□ 0.88
SMAD3-210ENST00000559092 ELP1O95163 1332 aa20.52■□□□□ 0.87
SMAD3-210ENST00000559092 DHX16O60231 1041 aaKnown RBP20.51■□□□□ 0.87
SMAD3-210ENST00000559092 CALML3P27482 149 aa20.51■□□□□ 0.87
SMAD3-210ENST00000559092 QRICH1Q2TAL8 776 aa20.51■□□□□ 0.87
SMAD3-210ENST00000559092 USH1GQ495M9 461 aa20.51■□□□□ 0.87
SMAD3-210ENST00000559092 GNASQ5JWF2 1037 aa20.51■□□□□ 0.87
SMAD3-210ENST00000559092 NOL8Q76FK4 1167 aaKnown RBP20.51■□□□□ 0.87
SMAD3-210ENST00000559092 FBXO11Q86XK2 927 aa20.51■□□□□ 0.87
SMAD3-210ENST00000559092 MB21D2Q8IYB1 491 aaPredicted RBP20.51■□□□□ 0.87
SMAD3-210ENST00000559092 MTMR8Q96EF0 704 aa20.51■□□□□ 0.87
SMAD3-210ENST00000559092 PURBQ96QR8 312 aaKnown RBP20.51■□□□□ 0.87
SMAD3-210ENST00000559092 LBHD1Q9BQE6 289 aaPredicted RBP20.51■□□□□ 0.87
SMAD3-210ENST00000559092 VAT1LQ9HCJ6 419 aa20.51■□□□□ 0.87
SMAD3-210ENST00000559092 MAD2L2Q9UI95 211 aa20.51■□□□□ 0.87
SMAD3-210ENST00000559092 MRPL11Q9Y3B7 192 aaKnown RBP20.51■□□□□ 0.87
SMAD3-210ENST00000559092 PLXNA1Q9UIW2 1896 aa20.51■□□□□ 0.87
SMAD3-210ENST00000559092 TLE2Q04725 743 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 TROAPQ12815 778 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 TRAF1Q13077 416 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 GRM4Q14833 912 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 TMEM67Q5HYA8 995 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 SLC30A10Q6XR72 485 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 STAG2Q8N3U4 1231 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 IGDCC4Q8TDY8 1250 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 CCDC136Q96JN2 1154 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms