RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 KLF18A0A0U1RQI7 1052 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 CCDC196A0A1B0GTZ2 297 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 GOLGA8BA8MQT2 603 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 GPR37L1O60883 481 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 KDM4AO75164 1064 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 CTDSPL2Q05D32 466 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 TMEM67Q5HYA8 995 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 IGDCC4Q8TDY8 1250 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 LRRC2Q9BYS8 371 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 C11orf16Q9NQ32 467 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 PHF24Q9UPV7 400 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 ZDHHC9Q9Y397 364 aa16.52■□□□□ 0.24
TRAPPC6B-206ENST00000556765 FAM86C2PA6NEL3 165 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 CCDC69A6NI79 296 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L12C9JPN9 530 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L21D6R901 530 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 CPLX1O14810 134 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 IFIT3O14879 490 aaKnown RBP16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 F13A1P00488 732 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 MRE11P49959 708 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 JAG1P78504 1218 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 STK3Q13188 491 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 WTAPQ15007 396 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 FAM47AQ5JRC9 791 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 OLFML2BQ68BL8 750 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 CYB5R4Q7L1T6 521 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 MICALL1Q8N3F8 863 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 NSUN7Q8NE18 718 aaKnown RBP16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 LY9Q9HBG7 655 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 TOMM22Q9NS69 142 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 ZSWIM5Q9P217 1185 aa16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRAPPC6B-206ENST00000556765 METAP2P50579 478 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRAPPC6B-206ENST00000556765 COL9A3Q14050 684 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC6B-206ENST00000556765 C12orf60Q5U649 245 aa16.5■□□□□ 0.23
TRAPPC6B-206ENST00000556765 APOA5Q6Q788 366 aa16.5■□□□□ 0.23
TRAPPC6B-206ENST00000556765 NFXL1Q6ZNB6 911 aa16.5■□□□□ 0.23
TRAPPC6B-206ENST00000556765 TEX11Q8IYF3 940 aa16.5■□□□□ 0.23
TRAPPC6B-206ENST00000556765 SLC44A5Q8NCS7 719 aa16.5■□□□□ 0.23
TRAPPC6B-206ENST00000556765 ZSCAN16Q9H4T2 348 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC6B-206ENST00000556765 EMILIN3Q9NT22 766 aa16.5■□□□□ 0.23
TRAPPC6B-206ENST00000556765 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
TRAPPC6B-206ENST00000556765 ZBTB43O43298 467 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 CALM1P0DP23 149 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 CALM2P0DP24 149 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 CALM3P0DP25 149 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 PKP1Q13835 747 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 RAB30Q15771 203 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 SHROOM1Q2M3G4 852 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 RASIP1Q5U651 963 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 CCDC174Q6PII3 467 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L2Q6R6M4 530 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 CHST3Q7LGC8 479 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 DPP9Q86TI2 863 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 MSRAQ9UJ68 235 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 NAP1L2Q9ULW6 460 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 MTMR6Q9Y217 621 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 SLC12A7Q9Y666 1083 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 MYH15Q9Y2K3 1946 aa16.49■□□□□ 0.23
TRAPPC6B-206ENST00000556765 STK36Q9NRP7 1315 aa16.48■□□□□ 0.23
TRAPPC6B-206ENST00000556765 WDFY4Q6ZS81 3184 aa16.48■□□□□ 0.23
TRAPPC6B-206ENST00000556765 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
TRAPPC6B-206ENST00000556765 FAAP100Q0VG06 881 aa16.48■□□□□ 0.23
TRAPPC6B-206ENST00000556765 RRP12Q5JTH9 1297 aaKnown RBP16.48■□□□□ 0.23
TRAPPC6B-206ENST00000556765 TMEM240Q5SV17 173 aa16.48■□□□□ 0.23
TRAPPC6B-206ENST00000556765 SH3RF3Q8TEJ3 882 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC6B-206ENST00000556765 BTBD7Q9P203 1132 aa16.48■□□□□ 0.23
TRAPPC6B-206ENST00000556765 PI4KBQ9UBF8 816 aa16.48■□□□□ 0.23
TRAPPC6B-206ENST00000556765 MYH8P13535 1937 aa16.48■□□□□ 0.23
TRAPPC6B-206ENST00000556765 A0A1W2PQ45 241 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 A0A1W2PQY0 241 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L15C9J2P7 530 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L13C9JLJ4 530 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L11C9JVI0 530 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L18D6R9N7 530 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L22D6RA61 530 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L17D6RBQ6 530 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L19D6RCP7 530 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L20D6RJB6 530 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 H3BQV1 296 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 GDF11O95390 407 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 TIMP1P01033 207 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 ADORA2AP29274 412 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 USP17L24Q0WX57 530 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 PPIGQ13427 754 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 SKIV2LQ15477 1246 aaKnown RBP16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 PRAMEF19Q5SWL8 479 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 ATL3Q6DD88 541 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 C16orf59Q7L2K0 433 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 TMEM87AQ8NBN3 555 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 WASF1Q92558 559 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 KHSRPQ92945 711 aaKnown RBP eCLIP16.47■□□□□ 0.232e-7■■□□□ 13.3
TRAPPC6B-206ENST00000556765 ZSCAN10Q96SZ4 725 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 NKX2-4Q9H2Z4 354 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 SLC28A3Q9HAS3 691 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 BRPF3Q9ULD4 1205 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 ZBTB21Q9ULJ3 1066 aa16.47■□□□□ 0.23
TRAPPC6B-206ENST00000556765 TNKSO95271 1327 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms