RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 CTAGE5O15320 804 aa22.22■■□□□ 1.15
CDKN3-209ENST00000556102 MUM1L1Q5H9M0 696 aa22.22■■□□□ 1.15
CDKN3-209ENST00000556102 SEMA6BQ9H3T3 888 aa22.22■■□□□ 1.15
CDKN3-209ENST00000556102 CYP39A1Q9NYL5 469 aa22.22■■□□□ 1.15
CDKN3-209ENST00000556102 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.21■■□□□ 1.15
CDKN3-209ENST00000556102 TIMP1P01033 207 aa22.21■■□□□ 1.15
CDKN3-209ENST00000556102 ICAM1P05362 532 aa22.21■■□□□ 1.15
CDKN3-209ENST00000556102 HSPD1P10809 573 aaKnown RBP22.21■■□□□ 1.15
CDKN3-209ENST00000556102 TOP1P11387 765 aaKnown RBP22.21■■□□□ 1.15
CDKN3-209ENST00000556102 NMIQ13287 307 aaPredicted RBP22.21■■□□□ 1.15
CDKN3-209ENST00000556102 RRP12Q5JTH9 1297 aaKnown RBP22.21■■□□□ 1.15
CDKN3-209ENST00000556102 BTNL9Q6UXG8 535 aa22.21■■□□□ 1.15
CDKN3-209ENST00000556102 NOL8Q76FK4 1167 aaKnown RBP22.21■■□□□ 1.15
CDKN3-209ENST00000556102 RANBP17Q9H2T7 1088 aaKnown RBP22.21■■□□□ 1.15
CDKN3-209ENST00000556102 TCP11L1Q9NUJ3 509 aa22.21■■□□□ 1.15
CDKN3-209ENST00000556102 ASTN1O14525 1302 aa22.21■■□□□ 1.15
CDKN3-209ENST00000556102 AAMPQ13685 434 aa22.2■■□□□ 1.14
CDKN3-209ENST00000556102 SYDE2Q5VT97 1194 aa22.2■■□□□ 1.14
CDKN3-209ENST00000556102 NSMFQ6X4W1 530 aa22.2■■□□□ 1.14
CDKN3-209ENST00000556102 ZNF589Q86UQ0 364 aaPredicted RBP22.2■■□□□ 1.14
CDKN3-209ENST00000556102 CDX2Q99626 313 aaPredicted RBP22.2■■□□□ 1.14
CDKN3-209ENST00000556102 TMEM47Q9BQJ4 181 aa22.2■■□□□ 1.14
CDKN3-209ENST00000556102 LNPKQ9C0E8 428 aa22.2■■□□□ 1.14
CDKN3-209ENST00000556102 GNEQ9Y223 722 aaKnown RBP22.2■■□□□ 1.14
CDKN3-209ENST00000556102 TRIM6-TRIM34B2RNG4 842 aa22.19■■□□□ 1.14
CDKN3-209ENST00000556102 SLC16A2P36021 539 aa22.19■■□□□ 1.14
CDKN3-209ENST00000556102 BEX3Q00994 111 aa22.19■■□□□ 1.14
CDKN3-209ENST00000556102 TTBK2Q6IQ55 1244 aa22.19■■□□□ 1.14
CDKN3-209ENST00000556102 MFSD5Q6N075 450 aa22.19■■□□□ 1.14
CDKN3-209ENST00000556102 TLK2Q86UE8 772 aa22.19■■□□□ 1.14
CDKN3-209ENST00000556102 FAM126BQ8IXS8 530 aa22.19■■□□□ 1.14
CDKN3-209ENST00000556102 TTYH1Q9H313 450 aaPredicted RBP22.19■■□□□ 1.14
CDKN3-209ENST00000556102 CCDC171Q6TFL3 1326 aa22.19■■□□□ 1.14
CDKN3-209ENST00000556102 UNC80Q8N2C7 3258 aa22.19■■□□□ 1.14
CDKN3-209ENST00000556102 TMEM265A0A087WTH1 108 aa22.18■■□□□ 1.14
CDKN3-209ENST00000556102 TLR3O15455 904 aaKnown RBP22.18■■□□□ 1.14
CDKN3-209ENST00000556102 PCP11498 1178 aaKnown RBP22.18■■□□□ 1.14
CDKN3-209ENST00000556102 HAND2P61296 217 aa22.18■■□□□ 1.14
CDKN3-209ENST00000556102 IQSEC1Q6DN90 963 aa22.18■■□□□ 1.14
CDKN3-209ENST00000556102 AP5M1Q9H0R1 490 aa22.18■■□□□ 1.14
CDKN3-209ENST00000556102 DDX49Q9Y6V7 483 aaKnown RBP22.18■■□□□ 1.14
CDKN3-209ENST00000556102 FRMPD2Q68DX3 1309 aaPredicted RBP22.17■■□□□ 1.14
CDKN3-209ENST00000556102 CABYRO75952 493 aa22.17■■□□□ 1.14
CDKN3-209ENST00000556102 SMPD1P17405 629 aa22.17■■□□□ 1.14
CDKN3-209ENST00000556102 PPIGQ13427 754 aaKnown RBP eCLIP22.17■■□□□ 1.14
CDKN3-209ENST00000556102 FSCN1Q16658 493 aaKnown RBP22.17■■□□□ 1.14
CDKN3-209ENST00000556102 TAPT1Q6NXT6 567 aa22.17■■□□□ 1.14
CDKN3-209ENST00000556102 FBXO16Q8IX29 292 aaPredicted RBP22.17■■□□□ 1.14
CDKN3-209ENST00000556102 SMC5Q8IY18 1101 aa22.17■■□□□ 1.14
CDKN3-209ENST00000556102 MORC4Q8TE76 937 aa22.17■■□□□ 1.14
CDKN3-209ENST00000556102 RILPL2Q969X0 211 aa22.17■■□□□ 1.14
CDKN3-209ENST00000556102 VTA1Q9NP79 307 aa22.17■■□□□ 1.14
CDKN3-209ENST00000556102 GPCPD1Q9NPB8 672 aa22.17■■□□□ 1.14
CDKN3-209ENST00000556102 PDGFCQ9NRA1 345 aa22.17■■□□□ 1.14
CDKN3-209ENST00000556102 Q9Y3F1 56 aa22.17■■□□□ 1.14
CDKN3-209ENST00000556102 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.16■■□□□ 1.14
CDKN3-209ENST00000556102 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.16■■□□□ 1.14
CDKN3-209ENST00000556102 DYNC1LI2O43237 492 aaPredicted RBP22.16■■□□□ 1.14
CDKN3-209ENST00000556102 PDHBP11177 359 aa22.16■■□□□ 1.14
CDKN3-209ENST00000556102 MFAP1P55081 439 aaKnown RBP22.16■■□□□ 1.14
CDKN3-209ENST00000556102 AKNAD1Q5T1N1 836 aa22.16■■□□□ 1.14
CDKN3-209ENST00000556102 CXCL17Q6UXB2 119 aa22.16■■□□□ 1.14
CDKN3-209ENST00000556102 MFSD6Q6ZSS7 791 aa22.16■■□□□ 1.14
CDKN3-209ENST00000556102 EEPD1Q7L9B9 569 aa22.16■■□□□ 1.14
CDKN3-209ENST00000556102 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.16■■□□□ 1.14
CDKN3-209ENST00000556102 SLC43A3Q8NBI5 491 aa22.16■■□□□ 1.14
CDKN3-209ENST00000556102 TTC14Q96N46 770 aa22.16■■□□□ 1.14
CDKN3-209ENST00000556102 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.16■■□□□ 1.14
CDKN3-209ENST00000556102 ADD3Q9UEY8 706 aaKnown RBP22.16■■□□□ 1.14
CDKN3-209ENST00000556102 LAMA4Q16363 1823 aa22.15■■□□□ 1.14
CDKN3-209ENST00000556102 LOC102724159A0A0B4J2E5 919 aa22.15■■□□□ 1.14
CDKN3-209ENST00000556102 ZEB2O60315 1214 aa22.15■■□□□ 1.14
CDKN3-209ENST00000556102 CD4P01730 458 aa22.15■■□□□ 1.14
CDKN3-209ENST00000556102 BAATQ14032 418 aaPredicted RBP22.15■■□□□ 1.14
CDKN3-209ENST00000556102 PWP2Q15269 919 aaKnown RBP22.15■■□□□ 1.14
CDKN3-209ENST00000556102 TMEM199Q8N511 208 aa22.15■■□□□ 1.14
CDKN3-209ENST00000556102 MYLIPQ8WY64 445 aa22.15■■□□□ 1.14
CDKN3-209ENST00000556102 PURBQ96QR8 312 aaKnown RBP22.15■■□□□ 1.14
CDKN3-209ENST00000556102 PPP1R12CQ9BZL4 782 aa22.15■■□□□ 1.14
CDKN3-209ENST00000556102 RWDD1Q9H446 243 aaPredicted RBP22.15■■□□□ 1.14
CDKN3-209ENST00000556102 RNF41Q9H4P4 317 aaPredicted RBP22.15■■□□□ 1.14
CDKN3-209ENST00000556102 PNMA2Q9UL42 364 aa22.15■■□□□ 1.14
CDKN3-209ENST00000556102 CDH23Q9H251 3354 aa22.14■■□□□ 1.14
CDKN3-209ENST00000556102 NFIBO00712 420 aa22.14■■□□□ 1.13
CDKN3-209ENST00000556102 SDSP20132 328 aa22.14■■□□□ 1.13
CDKN3-209ENST00000556102 PTGS1P23219 599 aa22.14■■□□□ 1.13
CDKN3-209ENST00000556102 ALDH5A1P51649 535 aaPredicted RBP22.14■■□□□ 1.13
CDKN3-209ENST00000556102 ZNF543Q08ER8 600 aa22.14■■□□□ 1.13
CDKN3-209ENST00000556102 TBC1D10CQ8IV04 446 aa22.14■■□□□ 1.13
CDKN3-209ENST00000556102 SEZ6LQ9BYH1 1024 aa22.14■■□□□ 1.13
CDKN3-209ENST00000556102 SNHG28P0DPA3 235 aa22.13■■□□□ 1.13
CDKN3-209ENST00000556102 CSF2RAP15509 400 aa22.13■■□□□ 1.13
CDKN3-209ENST00000556102 DNAJB2P25686 324 aa22.13■■□□□ 1.13
CDKN3-209ENST00000556102 ITGA7Q13683 1181 aa22.13■■□□□ 1.13
CDKN3-209ENST00000556102 TMEM240Q5SV17 173 aa22.13■■□□□ 1.13
CDKN3-209ENST00000556102 B4GALNT3Q6L9W6 998 aa22.13■■□□□ 1.13
CDKN3-209ENST00000556102 KIAA1211Q6ZU35 1233 aa22.13■■□□□ 1.13
CDKN3-209ENST00000556102 C16orf59Q7L2K0 433 aa22.13■■□□□ 1.13
CDKN3-209ENST00000556102 MAFAQ8NHW3 353 aaPredicted RBP22.13■■□□□ 1.13
CDKN3-209ENST00000556102 OSBPL3Q9H4L5 887 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms