RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 SRPRBQ9Y5M8 271 aaKnown RBP18.57■□□□□ 0.56
PCNX1-209ENST00000554879 CABP7Q86V35 215 aa18.57■□□□□ 0.56
PCNX1-209ENST00000554879 TRIM47Q96LD4 638 aa18.57■□□□□ 0.56
PCNX1-209ENST00000554879 ZDHHC15Q96MV8 337 aa18.57■□□□□ 0.56
PCNX1-209ENST00000554879 MYO1CO00159 1063 aa18.57■□□□□ 0.56
PCNX1-209ENST00000554879 UBXN2AP68543 259 aa18.57■□□□□ 0.56
PCNX1-209ENST00000554879 SNX29Q8TEQ0 813 aa18.57■□□□□ 0.56
PCNX1-209ENST00000554879 ZSWIM4Q9H7M6 989 aa18.57■□□□□ 0.56
PCNX1-209ENST00000554879 MYO3BQ8WXR4 1341 aa18.57■□□□□ 0.56
PCNX1-209ENST00000554879 EPS15P42566 896 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 RCSD1Q6JBY9 416 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 ADGRF4Q8IZF3 695 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 SERPINA10Q9UK55 444 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 FOXN1O15353 648 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 SLU7O95391 586 aaKnown RBP18.56■□□□□ 0.56
PCNX1-209ENST00000554879 OR52Z1P0C646 297 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 PRAMEF18Q5VWM3 479 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 MAD2L2Q9UI95 211 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 USP17L15C9J2P7 530 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 USP17L13C9JLJ4 530 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 USP17L11C9JVI0 530 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 USP17L18D6R9N7 530 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 USP17L22D6RA61 530 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 USP17L17D6RBQ6 530 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 USP17L19D6RCP7 530 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 USP17L20D6RJB6 530 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 PDHBP11177 359 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 USP17L24Q0WX57 530 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 CDC37Q16543 378 aaPredicted RBP18.56■□□□□ 0.56
PCNX1-209ENST00000554879 USP17L6PQ6QN14 398 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 DYMQ7RTS9 669 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 BARHL2Q9NY43 387 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 NRAPQ86VF7 1730 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 PHACTR2O75167 634 aa18.56■□□□□ 0.56
PCNX1-209ENST00000554879 ECM2O94769 699 aaPredicted RBP18.56■□□□□ 0.56
PCNX1-209ENST00000554879 SMYD4Q8IYR2 804 aaPredicted RBP18.56■□□□□ 0.56
PCNX1-209ENST00000554879 FAM163AQ96GL9 167 aaPredicted RBP18.56■□□□□ 0.56
PCNX1-209ENST00000554879 GALNT17Q6IS24 598 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 ZNF70Q9UC06 446 aaPredicted RBP18.55■□□□□ 0.56
PCNX1-209ENST00000554879 NFE2L3Q9Y4A8 694 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 MAP2K2P36507 400 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 ZNF75DP51815 510 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 PKN1Q16512 942 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 PRR16Q569H4 304 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 SAMD7Q7Z3H4 446 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 AMNQ9BXJ7 453 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 PAPPAQ13219 1627 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 PRR29P0C7W0 189 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 CCT6AP40227 531 aaKnown RBP18.55■□□□□ 0.56
PCNX1-209ENST00000554879 PPP2R5AQ15172 486 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 PTPN21Q16825 1174 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 NSMFQ6X4W1 530 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 EEF2KMTQ96G04 330 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 RMND1Q9NWS8 449 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 MYH3P11055 1940 aa18.55■□□□□ 0.56
PCNX1-209ENST00000554879 HOXA13P31271 388 aaPredicted RBP18.54■□□□□ 0.56
PCNX1-209ENST00000554879 TRAPPC10P48553 1259 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 MCM6Q14566 821 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 ERCC6LQ2NKX8 1250 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 RESP18Q5W5W9 173 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 CTNND2Q9UQB3 1225 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 PNMA6FA0A0J9YX94 578 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 N4BP3O15049 544 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 CHURC1Q8WUH1 139 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 EHMT1Q9H9B1 1298 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 ZNF408Q9H9D4 720 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 C4BP0C0L5 1744 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 CXCL9Q07325 125 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 ZBTB21Q9ULJ3 1066 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 N4BP2Q86UW6 1770 aaPredicted RBP18.54■□□□□ 0.56
PCNX1-209ENST00000554879 PP2D1A8MPX8 630 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 GAKO14976 1311 aa18.54■□□□□ 0.56
PCNX1-209ENST00000554879 TRAF1Q13077 416 aa18.53■□□□□ 0.56
PCNX1-209ENST00000554879 RASA3Q14644 834 aa18.53■□□□□ 0.56
PCNX1-209ENST00000554879 EARS2Q5JPH6 523 aaKnown RBP18.53■□□□□ 0.56
PCNX1-209ENST00000554879 FAM83BQ5T0W9 1011 aa18.53■□□□□ 0.56
PCNX1-209ENST00000554879 NCAPH2Q6IBW4 605 aa18.53■□□□□ 0.56
PCNX1-209ENST00000554879 ZNF341Q9BYN7 854 aa18.53■□□□□ 0.56
PCNX1-209ENST00000554879 ALAS1P13196 640 aa18.53■□□□□ 0.56
PCNX1-209ENST00000554879 ERCC3P19447 782 aa18.53■□□□□ 0.56
PCNX1-209ENST00000554879 SP4Q02446 784 aa18.53■□□□□ 0.56
PCNX1-209ENST00000554879 MTFR1LQ9H019 292 aa18.53■□□□□ 0.56
PCNX1-209ENST00000554879 MICALL2Q8IY33 904 aa18.53■□□□□ 0.56
PCNX1-209ENST00000554879 DDX39AO00148 427 aaKnown RBP18.52■□□□□ 0.56
PCNX1-209ENST00000554879 FLOT1O75955 427 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 SKILP12757 684 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 TOB1P50616 345 aaPredicted RBP18.52■□□□□ 0.56
PCNX1-209ENST00000554879 ZNF543Q08ER8 600 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 QRICH1Q2TAL8 776 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 KIAA1524Q8TCG1 905 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 BCCIPQ9P287 314 aaKnown RBP eCLIP18.52■□□□□ 0.56
PCNX1-209ENST00000554879 DDX25Q9UHL0 483 aaKnown RBP18.52■□□□□ 0.56
PCNX1-209ENST00000554879 IPO7O95373 1038 aaKnown RBP18.52■□□□□ 0.56
PCNX1-209ENST00000554879 MTIF2P46199 727 aaKnown RBP18.52■□□□□ 0.56
PCNX1-209ENST00000554879 FANCCQ00597 558 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 SYDE2Q5VT97 1194 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 ZBTB5O15062 677 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 STAT2P52630 851 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 RASSF7Q02833 373 aa18.52■□□□□ 0.56
PCNX1-209ENST00000554879 PDE4DQ08499 809 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms