RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 DIRC2Q96SL1 478 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 TRIM55Q9BYV6 548 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 EPB41L4BQ9H329 900 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 ACSL6Q9UKU0 697 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 AKT3Q9Y243 479 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 EMC9Q9Y3B6 208 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 TAF6LQ9Y6J9 622 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 STXBP3O00186 592 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 PNLIPP16233 465 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 KIR3DS1Q14943 382 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 SLC10A6Q3KNW5 377 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 EEF1DP3Q658K8 133 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 POMZP3Q6PJE2 187 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 DPH6Q7L8W6 267 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 EEPD1Q7L9B9 569 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 TRIM59Q8IWR1 403 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 SIRT2Q8IXJ6 389 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 CRACR2BQ8N4Y2 399 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-213ENST00000554776 BHLHE22Q8NFJ8 381 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-213ENST00000554776 MRGPRX3Q96LB0 322 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 LGR4Q9BXB1 951 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 DCP1AQ9NPI6 582 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-213ENST00000554776 BACE2Q9Y5Z0 518 aa4.76□□□□□ -1.65
SCFD1-213ENST00000554776 TBC1D8O95759 1140 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 PRKCAP17252 672 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 PDE6BP35913 854 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 ERVFRD-1P60508 538 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 LAPTM5Q13571 262 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 RASA3Q14644 834 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 DPY19L1Q2PZI1 675 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 KSR1Q8IVT5 923 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 NUP43Q8NFH3 380 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 SLC38A3Q99624 504 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 EPN3Q9H201 632 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 ZNF552Q9H707 407 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-213ENST00000554776 KCNK12Q9HB15 430 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 SIRPGQ9P1W8 387 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 IMPACTQ9P2X3 320 aa4.75□□□□□ -1.65
SCFD1-213ENST00000554776 OR14I1A6ND48 311 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 C2orf71A6NGG8 1288 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 HRKO00198 91 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 NOP56O00567 594 aaKnown RBP4.74□□□□□ -1.65
SCFD1-213ENST00000554776 U2SURPO15042 1029 aaKnown RBP4.74□□□□□ -1.65
SCFD1-213ENST00000554776 TBX1O43435 398 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 PEX10O60683 326 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 KCNH1O95259 989 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 CAPNS1P04632 268 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 ITGAVP06756 1048 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 YBX3P16989 372 aaKnown RBP eCLIP4.74□□□□□ -1.656e-7■■■□□ 16.2
SCFD1-213ENST00000554776 SEPHS1P49903 392 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 CORO7P57737 925 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 MVKQ03426 396 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 ADGRF1Q5T601 910 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 SOGA3Q5TF21 947 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 GTF2IRD2BQ6EKJ0 949 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 SYDE1Q6ZW31 735 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-213ENST00000554776 GTF2IRD2Q86UP8 949 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 ZNF227Q86WZ6 799 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 JAMLQ86YT9 394 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 ST13P5Q8NFI4 369 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-213ENST00000554776 COPS5Q92905 334 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 SLC26A8Q96RN1 970 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 PPP1R16BQ96T49 567 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 LNPKQ9C0E8 428 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 CCDC113Q9H0I3 377 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 TNFRSF12AQ9NP84 129 aa4.74□□□□□ -1.65
SCFD1-213ENST00000554776 MYOCOSA0A1B0GUC4 107 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 PDPK1O15530 556 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 TSPAN15O95858 294 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 KRT1P04264 644 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 MSL3P1P0C860 447 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 L1CAMP32004 1257 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 ARL4AP40617 200 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 CYP4F8P98187 520 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 RASGRF1Q13972 1273 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 CCDC144BQ3MJ40 725 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 SV2CQ496J9 727 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 ZNF605Q86T29 641 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 NLGN2Q8NFZ4 835 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 PPP1R14AQ96A00 147 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 ZNF669Q96BR6 464 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-213ENST00000554776 MCOLN1Q9GZU1 580 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 NKX2-4Q9H2Z4 354 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 CYP26B1Q9NR63 512 aa4.73□□□□□ -1.65
SCFD1-213ENST00000554776 TRBV23OR9-2A0A075B6M9 112 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 FAM221BA6H8Z2 402 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 MED14OSP0DP75 135 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 PAMP19021 973 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 SDHBP21912 280 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 GLDCP23378 1020 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 YBX1P67809 324 aaKnown RBP4.72□□□□□ -1.65
SCFD1-213ENST00000554776 CYP4F3Q08477 520 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 SCRN1Q12765 414 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 ZNF124Q15973 351 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 PKN1Q16512 942 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 LRP10Q7Z4F1 713 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 BTN2A2Q8WVV5 523 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 MKL1Q969V6 931 aa4.72□□□□□ -1.65
SCFD1-213ENST00000554776 OSBPL2Q9H1P3 480 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms