RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 PYM1Q9BRP8 204 aaKnown RBP12.43□□□□□ -0.42
PABPN1-203ENST00000553960 GLIS2Q9BZE0 524 aaPredicted RBP12.43□□□□□ -0.42
PABPN1-203ENST00000553960 USP25Q9UHP3 1055 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
PABPN1-203ENST00000553960 ZNF536O15090 1300 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 FRMPD4Q14CM0 1322 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 hCG_1642624A0A1W2PR95 340 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 USP17L15C9J2P7 530 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 USP17L13C9JLJ4 530 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 ADM5C9JUS6 153 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 USP17L11C9JVI0 530 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 USP17L18D6R9N7 530 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 USP17L22D6RA61 530 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 USP17L17D6RBQ6 530 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 USP17L19D6RCP7 530 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 USP17L20D6RJB6 530 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 TBX3O15119 743 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 GADD45BO75293 160 aaPredicted RBP12.42□□□□□ -0.42
PABPN1-203ENST00000553960 DSG3P32926 999 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 SLC16A2P36021 539 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 HSD17B4P51659 736 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 USP17L24Q0WX57 530 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 SNW1Q13573 536 aaKnown RBP12.42□□□□□ -0.42
PABPN1-203ENST00000553960 MTMR2Q13614 643 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 COG2Q14746 738 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 EARS2Q5JPH6 523 aaKnown RBP12.42□□□□□ -0.42
PABPN1-203ENST00000553960 TTC38Q5R3I4 469 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 RESP18Q5W5W9 173 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 NEK8Q86SG6 692 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 CHAMP1Q96JM3 812 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 AK8Q96MA6 479 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 FEZ1Q99689 392 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 CPVLQ9H3G5 476 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 FBXO2Q9UK22 296 aaPredicted RBP12.42□□□□□ -0.42
PABPN1-203ENST00000553960 TRPM7Q96QT4 1865 aa12.42□□□□□ -0.42
PABPN1-203ENST00000553960 GOLGA6L4A6NEF3 574 aa12.41□□□□□ -0.42
PABPN1-203ENST00000553960 VWA5AO00534 786 aa12.41□□□□□ -0.42
PABPN1-203ENST00000553960 EDIL3O43854 480 aa12.41□□□□□ -0.42
PABPN1-203ENST00000553960 LONP1P36776 959 aaKnown RBP12.41□□□□□ -0.42
PABPN1-203ENST00000553960 SREBF1P36956 1147 aa12.41□□□□□ -0.42
PABPN1-203ENST00000553960 CCDC183Q5T5S1 534 aa12.41□□□□□ -0.42
PABPN1-203ENST00000553960 FASTKD5Q7L8L6 764 aaKnown RBP12.41□□□□□ -0.42
PABPN1-203ENST00000553960 HOMER1Q86YM7 354 aa12.41□□□□□ -0.42
PABPN1-203ENST00000553960 MCF2L2Q86YR7 1114 aa12.41□□□□□ -0.42
PABPN1-203ENST00000553960 FMR1NBQ8N0W7 255 aaPredicted RBP12.41□□□□□ -0.42
PABPN1-203ENST00000553960 GTF3C2Q8WUA4 911 aaPredicted RBP12.41□□□□□ -0.42
PABPN1-203ENST00000553960 MRPS27Q92552 414 aaKnown RBP12.41□□□□□ -0.42
PABPN1-203ENST00000553960 NUP88Q99567 741 aaPredicted RBP12.41□□□□□ -0.42
PABPN1-203ENST00000553960 GDPD2Q9HCC8 539 aa12.41□□□□□ -0.42
PABPN1-203ENST00000553960 PCDHB6Q9Y5E3 794 aa12.41□□□□□ -0.42
PABPN1-203ENST00000553960 MYH7BA7E2Y1 1941 aa12.41□□□□□ -0.42
PABPN1-203ENST00000553960 SMCHD1A6NHR9 2005 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 CAVIN2O95810 425 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 ITGBL1O95965 494 aaPredicted RBP12.4□□□□□ -0.42
PABPN1-203ENST00000553960 COPB2P35606 906 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 ME1P48163 572 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 MOGSQ13724 837 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 PDIA5Q14554 519 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 XRRA1Q6P2D8 792 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 PIK3AP1Q6ZUJ8 805 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 NIPA1Q7RTP0 329 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 SPICE1Q8N0Z3 855 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 COA7Q96BR5 231 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 MTMR9Q96QG7 549 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 VAT1LQ9HCJ6 419 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 ZCCHC17Q9NP64 241 aaKnown RBP12.4□□□□□ -0.42
PABPN1-203ENST00000553960 TMOD4Q9NZQ9 345 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 TMEM63CQ9P1W3 806 aa12.4□□□□□ -0.42
PABPN1-203ENST00000553960 RBBP6Q7Z6E9 1792 aaKnown RBP12.4□□□□□ -0.42
PABPN1-203ENST00000553960 LOC102724159A0A0B4J2E5 919 aa12.39□□□□□ -0.43
PABPN1-203ENST00000553960 FSD2A1L4K1 749 aa12.39□□□□□ -0.43
PABPN1-203ENST00000553960 ZBED4O75132 1171 aa12.39□□□□□ -0.43
PABPN1-203ENST00000553960 ZBTB48P10074 688 aaPredicted RBP12.39□□□□□ -0.43
PABPN1-203ENST00000553960 PTGDRQ13258 359 aa12.39□□□□□ -0.43
PABPN1-203ENST00000553960 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
PABPN1-203ENST00000553960 PWP2Q15269 919 aaKnown RBP12.39□□□□□ -0.43
PABPN1-203ENST00000553960 PRAMEF18Q5VWM3 479 aa12.39□□□□□ -0.43
PABPN1-203ENST00000553960 FTOQ9C0B1 505 aaKnown RBP eCLIP12.39□□□□□ -0.43
PABPN1-203ENST00000553960 CLSTN2Q9H4D0 955 aa12.39□□□□□ -0.43
PABPN1-203ENST00000553960 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
PABPN1-203ENST00000553960 ZNF214Q9UL59 606 aaPredicted RBP12.39□□□□□ -0.43
PABPN1-203ENST00000553960 RPTORQ8N122 1335 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 TESPA1A2RU30 521 aaPredicted RBP12.38□□□□□ -0.43
PABPN1-203ENST00000553960 ADAMTS3O15072 1205 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 BCRP11274 1271 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
PABPN1-203ENST00000553960 NBR1Q14596 966 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 ZSCAN23Q3MJ62 389 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 Q4G0T1 1027 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 KANK3Q6NY19 840 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 SHC4Q6S5L8 630 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 CCDC73Q6ZRK6 1079 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 IGSF22Q8N9C0 903 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 TBCKQ8TEA7 893 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 CLEC4DQ8WXI8 215 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 HHIPL1Q96JK4 782 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 CCSER1Q9C0I3 900 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 EHMT1Q9H9B1 1298 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 KCNMB3Q9NPA1 279 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 FBXO28Q9NVF7 368 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms