RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 USP17L13C9JLJ4 530 aa22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 USP17L11C9JVI0 530 aa22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 USP17L18D6R9N7 530 aa22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 USP17L22D6RA61 530 aa22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 USP17L17D6RBQ6 530 aa22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 USP17L19D6RCP7 530 aa22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 USP17L20D6RJB6 530 aa22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 MEIS2O14770 477 aa22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 WDR46O15213 610 aaKnown RBP22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 CCNT1O60563 726 aaKnown RBP22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 USP17L24Q0WX57 530 aa22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 USP17L6PQ6QN14 398 aa22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 SYMPKQ92797 1274 aaKnown RBP22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 ERCC4Q92889 916 aaPredicted RBP22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 DCPSQ96C86 337 aaKnown RBP22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 ZC3H4Q9UPT8 1303 aaKnown RBP22.24■■□□□ 1.15
RBFOX1-215ENST00000553186 LAD1O00515 517 aa22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 OPLAHO14841 1288 aa22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 TAL1P17542 331 aaPredicted RBP22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 DGKZQ13574 1117 aa22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 MTMR2Q13614 643 aa22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 SASS6Q6UVJ0 657 aa22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 KRBA2Q6ZNG9 492 aa22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 EMILIN3Q9NT22 766 aa22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 POLR2DO15514 142 aaKnown RBP22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 SPP2Q13103 211 aa22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 ORC2Q13416 577 aaPredicted RBP22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 PICK1Q9NRD5 415 aa22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 KIAA1468Q9P260 1216 aa22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 DOCK1Q14185 1865 aa22.23■■□□□ 1.15
RBFOX1-215ENST00000553186 USP2O75604 605 aaPredicted RBP22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 PRPHP41219 470 aa22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 SULF1Q8IWU6 871 aa22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 POLR2AP24928 1970 aaKnown RBP22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 A0A087X0B3 334 aa22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 GLTPD2A6NH11 291 aa22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 ADM5C9JUS6 153 aa22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 GRIN3BO60391 1043 aa22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 NOL9Q5SY16 702 aaKnown RBP22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 USP50Q70EL3 339 aaPredicted RBP22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 ELOA2Q8IYF1 753 aaPredicted RBP22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 P2RX7Q99572 595 aaKnown RBP22.22■■□□□ 1.15
RBFOX1-215ENST00000553186 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 NEMFO60524 1076 aa22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 LONP1P36776 959 aaKnown RBP22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 BACE1P56817 501 aa22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 ZNF280CQ8ND82 737 aa22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 VCAM1P19320 739 aa22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 EPHX2P34913 555 aa22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 USP14P54578 494 aa22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 DTHD1Q6ZMT9 781 aa22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 CNNM3Q8NE01 707 aa22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 AS3MTQ9HBK9 375 aa22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 ZHX2Q9Y6X8 837 aa22.21■■□□□ 1.15
RBFOX1-215ENST00000553186 ACTN4O43707 911 aaKnown RBP22.2■■□□□ 1.14
RBFOX1-215ENST00000553186 MDM2Q00987 491 aaPredicted RBP22.2■■□□□ 1.14
RBFOX1-215ENST00000553186 TRAF1Q13077 416 aa22.2■■□□□ 1.14
RBFOX1-215ENST00000553186 ANO6Q4KMQ2 910 aa22.2■■□□□ 1.14
RBFOX1-215ENST00000553186 CCDC174Q6PII3 467 aa22.2■■□□□ 1.14
RBFOX1-215ENST00000553186 KRT26Q7Z3Y9 468 aa22.2■■□□□ 1.14
RBFOX1-215ENST00000553186 PDILTQ8N807 584 aa22.2■■□□□ 1.14
RBFOX1-215ENST00000553186 TDP2O95551 362 aa22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 OR52Z1P0C646 297 aa22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 AP3B2Q13367 1082 aa22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 PPP4R3AQ6IN85 833 aa22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 PRPF38AQ8NAV1 312 aaKnown RBP22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 ZC3H15Q8WU90 426 aaKnown RBP22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 SLF1Q9BQI6 1058 aa22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 SERTAD1Q9UHV2 236 aa22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 PRKG1Q13976 671 aa22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 CRYGNQ8WXF5 182 aa22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 MTMR9Q96QG7 549 aa22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 ANO3Q9BYT9 981 aa22.19■■□□□ 1.14
RBFOX1-215ENST00000553186 PIK3CDO00329 1044 aa22.18■■□□□ 1.14
RBFOX1-215ENST00000553186 SLC37A4O43826 429 aa22.18■■□□□ 1.14
RBFOX1-215ENST00000553186 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.18■■□□□ 1.14
RBFOX1-215ENST00000553186 POTEDQ86YR6 584 aa22.18■■□□□ 1.14
RBFOX1-215ENST00000553186 FAM200AQ8TCP9 573 aa22.18■■□□□ 1.14
RBFOX1-215ENST00000553186 A0A087WWV3 80 aa22.18■■□□□ 1.14
RBFOX1-215ENST00000553186 FOXN1O15353 648 aa22.18■■□□□ 1.14
RBFOX1-215ENST00000553186 MCTP2Q6DN12 878 aa22.18■■□□□ 1.14
RBFOX1-215ENST00000553186 SAMD1Q6SPF0 538 aaPredicted RBP22.18■■□□□ 1.14
RBFOX1-215ENST00000553186 TEX2Q8IWB9 1127 aa22.18■■□□□ 1.14
RBFOX1-215ENST00000553186 TUBE1Q9UJT0 475 aa22.18■■□□□ 1.14
RBFOX1-215ENST00000553186 ZNF536O15090 1300 aa22.17■■□□□ 1.14
RBFOX1-215ENST00000553186 PNOCQ13519 176 aa22.17■■□□□ 1.14
RBFOX1-215ENST00000553186 STX1AQ16623 288 aa22.17■■□□□ 1.14
RBFOX1-215ENST00000553186 UVSSAQ2YD98 709 aa22.17■■□□□ 1.14
RBFOX1-215ENST00000553186 C12orf42Q96LP6 360 aa22.17■■□□□ 1.14
RBFOX1-215ENST00000553186 DNAJC25Q9H1X3 360 aa22.17■■□□□ 1.14
RBFOX1-215ENST00000553186 RPAP3Q9H6T3 665 aaPredicted RBP22.17■■□□□ 1.14
RBFOX1-215ENST00000553186 POTECB2RU33 542 aa22.16■■□□□ 1.14
RBFOX1-215ENST00000553186 CDC25AP30304 524 aa22.16■■□□□ 1.14
RBFOX1-215ENST00000553186 LDHDQ86WU2 507 aa22.16■■□□□ 1.14
RBFOX1-215ENST00000553186 DHX58Q96C10 678 aa22.16■■□□□ 1.14
RBFOX1-215ENST00000553186 TANGO6Q9C0B7 1094 aa22.16■■□□□ 1.14
RBFOX1-215ENST00000553186 SNCAIPQ9Y6H5 919 aa22.16■■□□□ 1.14
RBFOX1-215ENST00000553186 FOSP01100 380 aaPredicted RBP22.16■■□□□ 1.14
RBFOX1-215ENST00000553186 ICAM1P05362 532 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms