RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 E2F4Q16254 413 aa12.9□□□□□ -0.34
DDB1-224ENST00000545894 CATIPQ7Z7H3 387 aa12.9□□□□□ -0.34
DDB1-224ENST00000545894 STAMQ92783 540 aa12.9□□□□□ -0.34
DDB1-224ENST00000545894 TNFRSF25Q93038 417 aa12.9□□□□□ -0.34
DDB1-224ENST00000545894 ZSCAN10Q96SZ4 725 aaPredicted RBP12.9□□□□□ -0.34
DDB1-224ENST00000545894 PYM1Q9BRP8 204 aaKnown RBP12.9□□□□□ -0.34
DDB1-224ENST00000545894 MXD3Q9BW11 206 aa12.9□□□□□ -0.34
DDB1-224ENST00000545894 VPS16Q9H269 839 aa12.9□□□□□ -0.34
DDB1-224ENST00000545894 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
DDB1-224ENST00000545894 FAM205AQ6ZU69 1335 aa12.9□□□□□ -0.34
DDB1-224ENST00000545894 hCG_1642624A0A1W2PR95 340 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 USP17L3A6NCW0 530 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 USP17L4A6NCW7 530 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 TFRCP02786 760 aaKnown RBP12.9□□□□□ -0.35
DDB1-224ENST00000545894 CXCL9Q07325 125 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 PAK1Q13153 545 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 PTGDRQ13258 359 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 CASP8Q14790 479 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 TCP11X2Q5H9J9 407 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 LEKR1Q6ZMV7 388 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 USP17L1Q7RTZ2 530 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 ENAHQ8N8S7 591 aaPredicted RBP12.9□□□□□ -0.35
DDB1-224ENST00000545894 BLZF1Q9H2G9 400 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 SUGCTQ9HAC7 445 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 TAB2Q9NYJ8 693 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 MYO6Q9UM54 1294 aa12.9□□□□□ -0.35
DDB1-224ENST00000545894 KCNJ18B7U540 433 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 RNF225M0QZC1 329 aaPredicted RBP12.89□□□□□ -0.35
DDB1-224ENST00000545894 PSMD14O00487 310 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 GTPBP6O43824 516 aaPredicted RBP12.89□□□□□ -0.35
DDB1-224ENST00000545894 COBLO75128 1261 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 PLEKHA8P1O95397 391 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 CYP7A1P22680 504 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 CDC25AP30304 524 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 KRT9P35527 623 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 AMPD2Q01433 879 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 KCNJ12Q14500 433 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 IFIT1BQ5T764 474 aaKnown RBP12.89□□□□□ -0.35
DDB1-224ENST00000545894 PDXDC2PQ6P474 469 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 SLF1Q9BQI6 1058 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 ACBD3Q9H3P7 528 aa12.89□□□□□ -0.35
DDB1-224ENST00000545894 N4BP1O75113 896 aaKnown RBP12.88□□□□□ -0.35
DDB1-224ENST00000545894 CALM1P0DP23 149 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 CALM2P0DP24 149 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 CALM3P0DP25 149 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 HSP90B2PQ58FF3 399 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 STRIP1Q5VSL9 837 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 FAM71BQ8TC56 605 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 SDR42E1Q8WUS8 393 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 NELFBQ8WX92 580 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 FAN1Q9Y2M0 1017 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
DDB1-224ENST00000545894 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 SBF1O95248 1867 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 IVLP07476 585 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 NPY5RQ15761 445 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 GRIK5Q16478 980 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 NOM1Q5C9Z4 860 aaKnown RBP12.88□□□□□ -0.35
DDB1-224ENST00000545894 ZNF658Q5TYW1 1059 aaPredicted RBP12.88□□□□□ -0.35
DDB1-224ENST00000545894 WWC2Q6AWC2 1192 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 WDR93Q6P2C0 686 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 CERS5Q8N5B7 392 aa12.88□□□□□ -0.35
DDB1-224ENST00000545894 NOA1Q8NC60 698 aaKnown RBP12.88□□□□□ -0.35
DDB1-224ENST00000545894 MAGEB6P1A0A0J9YX57 407 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 NDUFA10O95299 355 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 VIL1P09327 827 aaKnown RBP12.87□□□□□ -0.35
DDB1-224ENST00000545894 EIF6P56537 245 aaKnown RBP12.87□□□□□ -0.35
DDB1-224ENST00000545894 CIAPIN1Q6FI81 312 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 ADGRA1Q86SQ6 560 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 CCDC148Q8NFR7 591 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 WDR66Q8TBY9 1149 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 EPN1Q9Y6I3 576 aaPredicted RBP12.87□□□□□ -0.35
DDB1-224ENST00000545894 MYO1CO00159 1063 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 DDAH1O94760 285 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 TRAPPC10P48553 1259 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 UBXN1Q04323 297 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 TROAPQ12815 778 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 MFSD14BQ5SR56 506 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 NCAPH2Q6IBW4 605 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 TMTC3Q6ZXV5 915 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 IQCA1Q86XH1 822 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 CCDC102AQ96A19 550 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 MTRQ99707 1265 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 MED4Q9NPJ6 270 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
DDB1-224ENST00000545894 MYH6P13533 1939 aa12.87□□□□□ -0.35
DDB1-224ENST00000545894 H7C1D1 291 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 SMIM22K7EJ46 135 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 RPS6KA5O75582 802 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 RPN1P04843 607 aaKnown RBP12.86□□□□□ -0.35
DDB1-224ENST00000545894 TNIP1Q15025 636 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 SCN9AQ15858 1988 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 CCDC88AQ3V6T2 1871 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 RSBN1LQ6PCB5 846 aaPredicted RBP12.86□□□□□ -0.35
DDB1-224ENST00000545894 TRAPPC11Q7Z392 1133 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 OR8K1Q8NGG5 319 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 CHP1Q99653 195 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 RASSF4Q9H2L5 321 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms