RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 GSG1L2A8MUP6 293 aa13.73□□□□□ -0.21
TMEM258-208ENST00000545210 DYNC1LI2O43237 492 aaPredicted RBP13.73□□□□□ -0.21
TMEM258-208ENST00000545210 RAB11FIP3O75154 756 aa13.73□□□□□ -0.21
TMEM258-208ENST00000545210 PRDM1O75626 825 aa13.73□□□□□ -0.21
TMEM258-208ENST00000545210 ATP2A2P16615 1042 aaKnown RBP13.73□□□□□ -0.21
TMEM258-208ENST00000545210 OAZ1P54368 228 aa13.73□□□□□ -0.21
TMEM258-208ENST00000545210 AAK1Q2M2I8 961 aa13.73□□□□□ -0.21
TMEM258-208ENST00000545210 RPAP2Q8IXW5 612 aaPredicted RBP13.73□□□□□ -0.21
TMEM258-208ENST00000545210 RPUSD2Q8IZ73 545 aaKnown RBP13.73□□□□□ -0.21
TMEM258-208ENST00000545210 LRRC47Q8N1G4 583 aaKnown RBP13.73□□□□□ -0.21
TMEM258-208ENST00000545210 VWCEQ96DN2 955 aa13.73□□□□□ -0.21
TMEM258-208ENST00000545210 CEP95Q96GE4 821 aa13.73□□□□□ -0.21
TMEM258-208ENST00000545210 AP5M1Q9H0R1 490 aa13.73□□□□□ -0.21
TMEM258-208ENST00000545210 ACAD9Q9H845 621 aa13.73□□□□□ -0.21
TMEM258-208ENST00000545210 TRIP12Q14669 1992 aaPredicted RBP13.72□□□□□ -0.21
TMEM258-208ENST00000545210 ASB14A6NK59 587 aa13.72□□□□□ -0.21
TMEM258-208ENST00000545210 RFXAPO00287 272 aa13.72□□□□□ -0.21
TMEM258-208ENST00000545210 HMMRO75330 724 aa13.72□□□□□ -0.21
TMEM258-208ENST00000545210 SMPD1P17405 629 aa13.72□□□□□ -0.21
TMEM258-208ENST00000545210 TMEM63BQ5T3F8 832 aa13.72□□□□□ -0.21
TMEM258-208ENST00000545210 MKL1Q969V6 931 aa13.72□□□□□ -0.21
TMEM258-208ENST00000545210 CHMP4CQ96CF2 233 aa13.72□□□□□ -0.21
TMEM258-208ENST00000545210 AGBL1Q96MI9 1066 aa13.72□□□□□ -0.21
TMEM258-208ENST00000545210 A1CFQ9NQ94 594 aaKnown RBP13.72□□□□□ -0.21
TMEM258-208ENST00000545210 PDGFCQ9NRA1 345 aa13.72□□□□□ -0.21
TMEM258-208ENST00000545210 MTMR4Q9NYA4 1195 aa13.72□□□□□ -0.21
TMEM258-208ENST00000545210 ISY1Q9ULR0 285 aaKnown RBP13.72□□□□□ -0.21
TMEM258-208ENST00000545210 COG6Q9Y2V7 657 aa13.72□□□□□ -0.21
TMEM258-208ENST00000545210 TMEM232C9JQI7 657 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 ERC2O15083 957 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 ZEB2O60315 1214 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 TTLL1O95922 423 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 CA3P07451 260 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 BMP3P12645 472 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 TTLL4Q14679 1199 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 SLFN13Q68D06 897 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 EEPD1Q7L9B9 569 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 ZNF444Q8N0Y2 327 aaPredicted RBP13.71□□□□□ -0.21
TMEM258-208ENST00000545210 GMCL1P1Q8NEA9 526 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 SEZ6LQ9BYH1 1024 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 CERS4Q9HA82 394 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 RNF146Q9NTX7 359 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 MTCH2Q9Y6C9 303 aa13.71□□□□□ -0.21
TMEM258-208ENST00000545210 ZNF536O15090 1300 aa13.7□□□□□ -0.22
TMEM258-208ENST00000545210 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
TMEM258-208ENST00000545210 STAT2P52630 851 aa13.7□□□□□ -0.22
TMEM258-208ENST00000545210 IKQ13123 557 aaPredicted RBP13.7□□□□□ -0.22
TMEM258-208ENST00000545210 TMEM67Q5HYA8 995 aa13.7□□□□□ -0.22
TMEM258-208ENST00000545210 KRT40Q6A162 431 aa13.7□□□□□ -0.22
TMEM258-208ENST00000545210 TAPT1Q6NXT6 567 aa13.7□□□□□ -0.22
TMEM258-208ENST00000545210 GIMAP6Q6P9H5 292 aa13.7□□□□□ -0.22
TMEM258-208ENST00000545210 DEFB128Q7Z7B8 93 aa13.7□□□□□ -0.22
TMEM258-208ENST00000545210 FBXO16Q8IX29 292 aaPredicted RBP13.7□□□□□ -0.22
TMEM258-208ENST00000545210 TRERF1Q96PN7 1200 aa13.7□□□□□ -0.22
TMEM258-208ENST00000545210 ALDH8A1Q9H2A2 487 aaPredicted RBP13.7□□□□□ -0.22
TMEM258-208ENST00000545210 EPHX3Q9H6B9 360 aa13.7□□□□□ -0.22
TMEM258-208ENST00000545210 EPB41L4AQ9HCS5 686 aaPredicted RBP13.7□□□□□ -0.22
TMEM258-208ENST00000545210 TRMT13Q9NUP7 481 aaKnown RBP13.7□□□□□ -0.22
TMEM258-208ENST00000545210 SYNPO2Q9UMS6 1093 aa13.7□□□□□ -0.22
TMEM258-208ENST00000545210 TET1Q8NFU7 2136 aa13.7□□□□□ -0.22
TMEM258-208ENST00000545210 SCN10AQ9Y5Y9 1956 aa13.69□□□□□ -0.22
TMEM258-208ENST00000545210 EPOPA6NHQ4 379 aa13.69□□□□□ -0.22
TMEM258-208ENST00000545210 GTPBP6O43824 516 aaPredicted RBP13.69□□□□□ -0.22
TMEM258-208ENST00000545210 FDX1P10109 184 aa13.69□□□□□ -0.22
TMEM258-208ENST00000545210 CYP2C9P11712 490 aa13.69□□□□□ -0.22
TMEM258-208ENST00000545210 ALAS1P13196 640 aa13.69□□□□□ -0.22
TMEM258-208ENST00000545210 TDO2P48775 406 aa13.69□□□□□ -0.22
TMEM258-208ENST00000545210 IQSEC1Q6DN90 963 aa13.69□□□□□ -0.22
TMEM258-208ENST00000545210 OSBP2Q969R2 916 aa13.69□□□□□ -0.22
TMEM258-208ENST00000545210 LRFN3Q9BTN0 628 aa13.69□□□□□ -0.22
TMEM258-208ENST00000545210 ZNF287Q9HBT7 754 aa13.69□□□□□ -0.22
TMEM258-208ENST00000545210 Q9Y3F1 56 aa13.69□□□□□ -0.22
TMEM258-208ENST00000545210 SMARCA5O60264 1052 aaPredicted RBP13.68□□□□□ -0.22
TMEM258-208ENST00000545210 APPP05067 770 aa13.68□□□□□ -0.22
TMEM258-208ENST00000545210 PFKMP08237 780 aa13.68□□□□□ -0.22
TMEM258-208ENST00000545210 TSPY3P0CV98 308 aa13.68□□□□□ -0.22
TMEM258-208ENST00000545210 TSPY8P0CW00 308 aa13.68□□□□□ -0.22
TMEM258-208ENST00000545210 POU3F3P20264 500 aaPredicted RBP13.68□□□□□ -0.22
TMEM258-208ENST00000545210 SNAP25P60880 206 aa13.68□□□□□ -0.22
TMEM258-208ENST00000545210 HNRNPUQ00839 825 aaKnown RBP eCLIP13.68□□□□□ -0.22
TMEM258-208ENST00000545210 MUM1L1Q5H9M0 696 aa13.68□□□□□ -0.22
TMEM258-208ENST00000545210 KIAA1211Q6ZU35 1233 aa13.68□□□□□ -0.22
TMEM258-208ENST00000545210 CHURC1Q8WUH1 139 aa13.68□□□□□ -0.22
TMEM258-208ENST00000545210 PURBQ96QR8 312 aaKnown RBP13.68□□□□□ -0.22
TMEM258-208ENST00000545210 ZBTB40Q9NUA8 1239 aa13.68□□□□□ -0.22
TMEM258-208ENST00000545210 CYP39A1Q9NYL5 469 aa13.68□□□□□ -0.22
TMEM258-208ENST00000545210 PLIN4Q96Q06 1357 aa13.68□□□□□ -0.22
TMEM258-208ENST00000545210 TNKSO95271 1327 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 GPAA1O43292 621 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 SUPT20HL2P0C7V6 817 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 MCCP23508 829 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 SLC1A4P43007 532 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 TKFCQ3LXA3 575 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 DIEXFQ68CQ4 756 aaKnown RBP13.67□□□□□ -0.22
TMEM258-208ENST00000545210 FAM160B2Q86V87 743 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 NEDD1Q8NHV4 660 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 STAG1Q8WVM7 1258 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 ARNTL2Q8WYA1 636 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 APPBP2Q92624 585 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 GMCL1Q96IK5 515 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms