RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
GABPB1-206ENST00000543881 CD4P01730 458 aa14.07□□□□□ -0.16
GABPB1-206ENST00000543881 FGBP02675 491 aa14.07□□□□□ -0.16
GABPB1-206ENST00000543881 KIFC2Q96AC6 838 aa14.07□□□□□ -0.16
GABPB1-206ENST00000543881 LNPKQ9C0E8 428 aa14.07□□□□□ -0.16
GABPB1-206ENST00000543881 SYNPO2Q9UMS6 1093 aa14.07□□□□□ -0.16
GABPB1-206ENST00000543881 YBX2Q9Y2T7 364 aaKnown RBP14.07□□□□□ -0.16
GABPB1-206ENST00000543881 TCF20Q9UGU0 1960 aaKnown RBP14.07□□□□□ -0.16
GABPB1-206ENST00000543881 NCOR1O75376 2440 aa14.07□□□□□ -0.16
GABPB1-206ENST00000543881 A0A0D9SFI3 127 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 ATP2A1O14983 1001 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 ZBED4O75132 1171 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 IGHDP01880 384 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 SLC3A2P08195 630 aaKnown RBP14.06□□□□□ -0.16
GABPB1-206ENST00000543881 SLFN13Q68D06 897 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 ARMCX2Q7L311 632 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 SMC5Q8IY18 1101 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 ANKRD35Q8N283 1001 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 FAM122AQ96E09 287 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 FGD4Q96M96 766 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 SLC38A10Q9HBR0 1119 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 RAVER2Q9HCJ3 691 aaKnown RBP14.06□□□□□ -0.16
GABPB1-206ENST00000543881 IL17RBQ9NRM6 502 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 FEM1BQ9UK73 627 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 CTDP1Q9Y5B0 961 aaPredicted RBP14.06□□□□□ -0.16
GABPB1-206ENST00000543881 CTAGE5O15320 804 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 NMT2O60551 498 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 BEX3Q00994 111 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.06□□□□□ -0.16
GABPB1-206ENST00000543881 OTOP2Q7RTS6 562 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 CHMP4CQ96CF2 233 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 TSPYL2Q9H2G4 693 aaPredicted RBP14.06□□□□□ -0.16
GABPB1-206ENST00000543881 HIPK3Q9H422 1215 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 HELLSQ9NRZ9 838 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 ANAPC4Q9UJX5 808 aa14.06□□□□□ -0.16
GABPB1-206ENST00000543881 CHD7Q9P2D1 2997 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 UMODL1Q5DID0 1318 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 BMP3P12645 472 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 RABGGTBP53611 331 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 NKX3-2P78367 333 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 ALX1Q15699 326 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 B4GALNT3Q6L9W6 998 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 RASGRP2Q7LDG7 609 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 ZNF589Q86UQ0 364 aaPredicted RBP14.05□□□□□ -0.16
GABPB1-206ENST00000543881 CCDC144CPQ8IYA2 1237 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 SLC43A3Q8NBI5 491 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 EXOC6Q8TAG9 804 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 NECAB3Q96P71 396 aaPredicted RBP14.05□□□□□ -0.16
GABPB1-206ENST00000543881 KATNBL1Q9H079 304 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 FBXO40Q9UH90 709 aa14.05□□□□□ -0.16
GABPB1-206ENST00000543881 TSPY2A6NKD2 308 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 TMEM232C9JQI7 657 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 FGAP02671 866 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 FGRP09769 529 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 BMP1P13497 986 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 MCCP23508 829 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 NOVP48745 357 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 CCL23P55773 120 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 NMIQ13287 307 aaPredicted RBP14.04□□□□□ -0.16
GABPB1-206ENST00000543881 AAMPQ13685 434 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 MCMDC2Q4G0Z9 681 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 PPP2R2DQ66LE6 453 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 CXCL17Q6UXB2 119 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 NOL8Q76FK4 1167 aaKnown RBP14.04□□□□□ -0.16
GABPB1-206ENST00000543881 MICALL1Q8N3F8 863 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 CHST13Q8NET6 341 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 GMCL1Q96IK5 515 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 STX8Q9UNK0 236 aa14.04□□□□□ -0.16
GABPB1-206ENST00000543881 ASTN1O14525 1302 aa14.03□□□□□ -0.16
GABPB1-206ENST00000543881 REV3LO60673 3130 aa14.03□□□□□ -0.16
GABPB1-206ENST00000543881 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-206ENST00000543881 ORC4O43929 436 aa14.03□□□□□ -0.16
GABPB1-206ENST00000543881 CABYRO75952 493 aa14.03□□□□□ -0.16
GABPB1-206ENST00000543881 HSPD1P10809 573 aaKnown RBP14.03□□□□□ -0.16
GABPB1-206ENST00000543881 CNTN2Q02246 1040 aa14.03□□□□□ -0.16
GABPB1-206ENST00000543881 TNFAIP2Q03169 654 aa14.03□□□□□ -0.16
GABPB1-206ENST00000543881 TFF2Q03403 129 aa14.03□□□□□ -0.16
GABPB1-206ENST00000543881 ITGA7Q13683 1181 aa14.03□□□□□ -0.16
GABPB1-206ENST00000543881 C1QTNF1Q9BXJ1 281 aa14.03□□□□□ -0.16
GABPB1-206ENST00000543881 RWDD1Q9H446 243 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-206ENST00000543881 ZNF536O15090 1300 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 TRIM6-TRIM34B2RNG4 842 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 RANBP6O60518 1105 aaKnown RBP14.02□□□□□ -0.16
GABPB1-206ENST00000543881 MYOGP15173 224 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 SLC1A4P43007 532 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 STAT2P52630 851 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 OAZ1P54368 228 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 KCTD1Q719H9 257 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 CHD1LQ86WJ1 897 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 PLEKHM2Q8IWE5 1019 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 STAG1Q8WVM7 1258 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 RILPL2Q969X0 211 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 NOC4LQ9BVI4 516 aaKnown RBP14.02□□□□□ -0.16
GABPB1-206ENST00000543881 HOMER2Q9NSB8 354 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 PCDHA11Q9Y5I1 949 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 SLC4A7Q9Y6M7 1214 aa14.02□□□□□ -0.16
GABPB1-206ENST00000543881 BDP1A6H8Y1 2624 aa14.02□□□□□ -0.17
GABPB1-206ENST00000543881 GRIN2DO15399 1336 aa14.02□□□□□ -0.17
GABPB1-206ENST00000543881 B4GALT4O60513 344 aa14.01□□□□□ -0.17
GABPB1-206ENST00000543881 SNAP25P60880 206 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms