RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 DDX25Q9UHL0 483 aaKnown RBP16.05■□□□□ 0.16
GCFC2-211ENST00000541687 KIAA1024Q9UPX6 916 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 UBLCP1Q8WVY7 318 aaPredicted RBP16.05■□□□□ 0.16
GCFC2-211ENST00000541687 USP21Q9UK80 565 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 DNM3Q9UQ16 869 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 FAM26FQ5R3K3 315 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 OGFOD1Q8N543 542 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 LARP4BQ92615 738 aaKnown RBP16.05■□□□□ 0.16
GCFC2-211ENST00000541687 MRPL44Q9H9J2 332 aaKnown RBP16.05■□□□□ 0.16
GCFC2-211ENST00000541687 FAN1Q9Y2M0 1017 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 ADGRG1Q9Y653 693 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 SEMA3EO15041 775 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 RPL13P26373 211 aaKnown RBP16.05■□□□□ 0.16
GCFC2-211ENST00000541687 TNNC1P63316 161 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 PFKFB3Q16875 520 aaPredicted RBP16.05■□□□□ 0.16
GCFC2-211ENST00000541687 HAUS3Q68CZ6 603 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 TTC19Q6DKK2 380 aaPredicted RBP16.05■□□□□ 0.16
GCFC2-211ENST00000541687 FNBP4Q8N3X1 1017 aaPredicted RBP16.05■□□□□ 0.16
GCFC2-211ENST00000541687 ANKRD7Q92527 254 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 BICD1Q96G01 975 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 ABCB6Q9NP58 842 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 PANK4Q9NVE7 773 aa16.05■□□□□ 0.16
GCFC2-211ENST00000541687 BAZ2BQ9UIF8 2168 aaKnown RBP16.04■□□□□ 0.16
GCFC2-211ENST00000541687 EPB41P11171 864 aaKnown RBP16.04■□□□□ 0.16
GCFC2-211ENST00000541687 PTPAQ15257 358 aa16.04■□□□□ 0.16
GCFC2-211ENST00000541687 ZNF34Q8IZ26 560 aa16.04■□□□□ 0.16
GCFC2-211ENST00000541687 TMEM47Q9BQJ4 181 aa16.04■□□□□ 0.16
GCFC2-211ENST00000541687 POLD4Q9HCU8 107 aa16.04■□□□□ 0.16
GCFC2-211ENST00000541687 EEF1GP26641 437 aaKnown RBP16.04■□□□□ 0.16
GCFC2-211ENST00000541687 CCDC25Q86WR0 208 aa16.04■□□□□ 0.16
GCFC2-211ENST00000541687 ABHD10Q9NUJ1 306 aa16.04■□□□□ 0.16
GCFC2-211ENST00000541687 CCDC174Q6PII3 467 aa16.04■□□□□ 0.16
GCFC2-211ENST00000541687 TPH2Q8IWU9 490 aa16.04■□□□□ 0.16
GCFC2-211ENST00000541687 TRIM58Q8NG06 486 aa16.04■□□□□ 0.16
GCFC2-211ENST00000541687 HPS3Q969F9 1004 aa16.04■□□□□ 0.16
GCFC2-211ENST00000541687 PCDHA1Q9Y5I3 950 aa16.04■□□□□ 0.16
GCFC2-211ENST00000541687 ANKRD26Q9UPS8 1709 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 GBP2P32456 591 aaPredicted RBP16.03■□□□□ 0.16
GCFC2-211ENST00000541687 MSL1Q68DK7 614 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 SPICE1Q8N0Z3 855 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 MYCT1Q8N699 235 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 TBC1D22AQ8WUA7 517 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 AGXT2Q9BYV1 514 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 XDHP47989 1333 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 CTIFO43310 598 aaKnown RBP16.03■□□□□ 0.16
GCFC2-211ENST00000541687 CDK8P49336 464 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 NYAP1Q6ZVC0 841 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 HDAC6Q9UBN7 1215 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 CCDC151A5D8V7 595 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 ABCB4P21439 1286 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 ARHGAP44Q17R89 818 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 MB21D1Q8N884 522 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 TTC26A0AVF1 554 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 POTEMA6NI47 508 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 FXR1P51114 621 aaKnown RBP eCLIP16.03■□□□□ 0.16
GCFC2-211ENST00000541687 C2orf54Q08AI8 447 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 PABPC4Q13310 644 aaKnown RBP eCLIP16.03■□□□□ 0.16
GCFC2-211ENST00000541687 CFAP221Q4G0U5 840 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 CPXCR1Q8N123 301 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 NHEJ1Q9H9Q4 299 aaPredicted RBP16.03■□□□□ 0.16
GCFC2-211ENST00000541687 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
GCFC2-211ENST00000541687 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.16
GCFC2-211ENST00000541687 MEIS1O00470 390 aa16.02■□□□□ 0.16
GCFC2-211ENST00000541687 NDUFAB1O14561 156 aa16.02■□□□□ 0.16
GCFC2-211ENST00000541687 EHHADHQ08426 723 aa16.02■□□□□ 0.16
GCFC2-211ENST00000541687 ADAM9Q13443 819 aa16.02■□□□□ 0.16
GCFC2-211ENST00000541687 WDR78Q5VTH9 848 aa16.02■□□□□ 0.16
GCFC2-211ENST00000541687 ADAT2Q7Z6V5 191 aaKnown RBP16.02■□□□□ 0.16
GCFC2-211ENST00000541687 DGKHQ86XP1 1220 aa16.02■□□□□ 0.16
GCFC2-211ENST00000541687 TC2NQ8N9U0 490 aa16.02■□□□□ 0.16
GCFC2-211ENST00000541687 GJA10Q969M2 543 aa16.02■□□□□ 0.16
GCFC2-211ENST00000541687 CCNE1P24864 410 aa16.02■□□□□ 0.15
GCFC2-211ENST00000541687 ATP1A2P50993 1020 aa16.02■□□□□ 0.15
GCFC2-211ENST00000541687 TXNRD1Q16881 649 aa16.02■□□□□ 0.15
GCFC2-211ENST00000541687 GALNT17Q6IS24 598 aa16.02■□□□□ 0.15
GCFC2-211ENST00000541687 CC2D1AQ6P1N0 951 aaPredicted RBP16.02■□□□□ 0.15
GCFC2-211ENST00000541687 LMBR1Q8WVP7 490 aa16.02■□□□□ 0.15
GCFC2-211ENST00000541687 DHTKD1Q96HY7 919 aaPredicted RBP16.02■□□□□ 0.15
GCFC2-211ENST00000541687 CHP1Q99653 195 aa16.02■□□□□ 0.15
GCFC2-211ENST00000541687 TMEM260Q9NX78 707 aa16.02■□□□□ 0.15
GCFC2-211ENST00000541687 MOCS3O95396 460 aa16.02■□□□□ 0.15
GCFC2-211ENST00000541687 CCDC172P0C7W6 258 aa16.02■□□□□ 0.15
GCFC2-211ENST00000541687 RASSF4Q9H2L5 321 aa16.02■□□□□ 0.15
GCFC2-211ENST00000541687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
GCFC2-211ENST00000541687 KLRK1P26718 216 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 TOB1P50616 345 aaPredicted RBP16.01■□□□□ 0.15
GCFC2-211ENST00000541687 SMIM22K7EJ46 135 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 KCNK3O14649 394 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 CACNB3P54284 484 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 SNAP25P60880 206 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 UBXN2AP68543 259 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 RPS6KA1Q15418 735 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 KCTD16Q68DU8 428 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 NSUN4Q96CB9 384 aaKnown RBP16.01■□□□□ 0.15
GCFC2-211ENST00000541687 SELENOSQ9BQE4 189 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 FAM204AQ9H8W3 233 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 FRMD4BQ9Y2L6 1034 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 ATP2B4P23634 1241 aa16.01■□□□□ 0.15
GCFC2-211ENST00000541687 EIF4A3P38919 411 aaKnown RBP16.01■□□□□ 0.15
GCFC2-211ENST00000541687 SLC7A5Q01650 507 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms