RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PLEKHA8P1O95397 391 aa22.54■■□□□ 1.2
DDX55-207ENST00000540763 ALAS1P13196 640 aa22.54■■□□□ 1.2
DDX55-207ENST00000540763 ADORA2AP29274 412 aa22.54■■□□□ 1.2
DDX55-207ENST00000540763 CCDC144CPQ8IYA2 1237 aa22.54■■□□□ 1.2
DDX55-207ENST00000540763 SLAIN1Q8ND83 568 aa22.54■■□□□ 1.2
DDX55-207ENST00000540763 TRERF1Q96PN7 1200 aa22.54■■□□□ 1.2
DDX55-207ENST00000540763 AMNQ9BXJ7 453 aa22.54■■□□□ 1.2
DDX55-207ENST00000540763 SLC5A4Q9NY91 659 aa22.54■■□□□ 1.2
DDX55-207ENST00000540763 PFASO15067 1338 aa22.54■■□□□ 1.2
DDX55-207ENST00000540763 ABCB11O95342 1321 aa22.54■■□□□ 1.2
DDX55-207ENST00000540763 PDIA3P30101 505 aaKnown RBP22.53■■□□□ 1.2
DDX55-207ENST00000540763 FBXO11Q86XK2 927 aa22.53■■□□□ 1.2
DDX55-207ENST00000540763 RAB11FIP4Q86YS3 637 aa22.53■■□□□ 1.2
DDX55-207ENST00000540763 SRBD1Q8N5C6 995 aaKnown RBP22.53■■□□□ 1.2
DDX55-207ENST00000540763 RRP36Q96EU6 259 aaKnown RBP22.53■■□□□ 1.2
DDX55-207ENST00000540763 VAT1LQ9HCJ6 419 aa22.53■■□□□ 1.2
DDX55-207ENST00000540763 FAM217BQ9NTX9 383 aaPredicted RBP22.53■■□□□ 1.2
DDX55-207ENST00000540763 PNMA6FA0A0J9YX94 578 aa22.52■■□□□ 1.2
DDX55-207ENST00000540763 NEK4P51957 841 aa22.52■■□□□ 1.2
DDX55-207ENST00000540763 AK2P54819 239 aa22.52■■□□□ 1.2
DDX55-207ENST00000540763 PRPF38BQ5VTL8 546 aaKnown RBP22.52■■□□□ 1.2
DDX55-207ENST00000540763 PIGSQ96S52 555 aa22.52■■□□□ 1.2
DDX55-207ENST00000540763 NAP1L2Q9ULW6 460 aaPredicted RBP22.52■■□□□ 1.2
DDX55-207ENST00000540763 DIS3Q9Y2L1 958 aaKnown RBP22.52■■□□□ 1.2
DDX55-207ENST00000540763 CNTNAP5Q8WYK1 1306 aa22.52■■□□□ 1.2
DDX55-207ENST00000540763 DNAJC25-GNG10A0A024R161 153 aa22.51■■□□□ 1.19
DDX55-207ENST00000540763 ADCY3O60266 1144 aa22.51■■□□□ 1.19
DDX55-207ENST00000540763 CDC27P30260 824 aa22.51■■□□□ 1.19
DDX55-207ENST00000540763 GRK4P32298 578 aa22.51■■□□□ 1.19
DDX55-207ENST00000540763 FUT2Q10981 343 aa22.51■■□□□ 1.19
DDX55-207ENST00000540763 RABEP1Q15276 862 aa22.51■■□□□ 1.19
DDX55-207ENST00000540763 HOMER2Q9NSB8 354 aa22.51■■□□□ 1.19
DDX55-207ENST00000540763 SEC63Q9UGP8 760 aaKnown RBP22.51■■□□□ 1.19
DDX55-207ENST00000540763 SLC4A3P48751 1232 aa22.5■■□□□ 1.19
DDX55-207ENST00000540763 SLC9C1Q4G0N8 1177 aa22.5■■□□□ 1.19
DDX55-207ENST00000540763 MUM1L1Q5H9M0 696 aa22.5■■□□□ 1.19
DDX55-207ENST00000540763 DPP9Q86TI2 863 aa22.5■■□□□ 1.19
DDX55-207ENST00000540763 HOMER1Q86YM7 354 aa22.5■■□□□ 1.19
DDX55-207ENST00000540763 ANKRD35Q8N283 1001 aa22.5■■□□□ 1.19
DDX55-207ENST00000540763 RGS22Q8NE09 1264 aa22.5■■□□□ 1.19
DDX55-207ENST00000540763 A1CFQ9NQ94 594 aaKnown RBP22.5■■□□□ 1.19
DDX55-207ENST00000540763 RBM27Q9P2N5 1060 aaKnown RBP22.5■■□□□ 1.19
DDX55-207ENST00000540763 MRPL11Q9Y3B7 192 aaKnown RBP22.5■■□□□ 1.19
DDX55-207ENST00000540763 PPP1R11O60927 126 aaPredicted RBP22.49■■□□□ 1.19
DDX55-207ENST00000540763 CYP2B6P20813 491 aa22.49■■□□□ 1.19
DDX55-207ENST00000540763 USH1GQ495M9 461 aa22.49■■□□□ 1.19
DDX55-207ENST00000540763 OLFML2BQ68BL8 750 aa22.49■■□□□ 1.19
DDX55-207ENST00000540763 SAMD3Q8N6K7 520 aa22.49■■□□□ 1.19
DDX55-207ENST00000540763 CLEC4DQ8WXI8 215 aa22.49■■□□□ 1.19
DDX55-207ENST00000540763 ARMC5Q96C12 935 aa22.49■■□□□ 1.19
DDX55-207ENST00000540763 DDX11Q96FC9 970 aa22.49■■□□□ 1.19
DDX55-207ENST00000540763 HTTP42858 3142 aa22.48■■□□□ 1.19
DDX55-207ENST00000540763 COBLO75128 1261 aa22.48■■□□□ 1.19
DDX55-207ENST00000540763 HMGCRP04035 888 aa22.48■■□□□ 1.19
DDX55-207ENST00000540763 GHRHRQ02643 423 aa22.48■■□□□ 1.19
DDX55-207ENST00000540763 ZNF792Q3KQV3 632 aa22.48■■□□□ 1.19
DDX55-207ENST00000540763 ZNF467Q7Z7K2 595 aaPredicted RBP22.48■■□□□ 1.19
DDX55-207ENST00000540763 MAP3K20Q9NYL2 800 aaKnown RBP22.48■■□□□ 1.19
DDX55-207ENST00000540763 CYP39A1Q9NYL5 469 aa22.48■■□□□ 1.19
DDX55-207ENST00000540763 TPCN1Q9ULQ1 816 aa22.48■■□□□ 1.19
DDX55-207ENST00000540763 PCDHA1Q9Y5I3 950 aa22.48■■□□□ 1.19
DDX55-207ENST00000540763 hCG_1984214I3L0E3 225 aa22.47■■□□□ 1.19
DDX55-207ENST00000540763 NFIBO00712 420 aa22.47■■□□□ 1.19
DDX55-207ENST00000540763 IGHA2P01877 340 aa22.47■■□□□ 1.19
DDX55-207ENST00000540763 IFNAR1P17181 557 aa22.47■■□□□ 1.19
DDX55-207ENST00000540763 ADD1P35611 737 aaKnown RBP22.47■■□□□ 1.19
DDX55-207ENST00000540763 MCF2L2Q86YR7 1114 aa22.47■■□□□ 1.19
DDX55-207ENST00000540763 CMTR1Q8N1G2 835 aaKnown RBP22.47■■□□□ 1.19
DDX55-207ENST00000540763 MSL3Q8N5Y2 521 aaKnown RBP22.47■■□□□ 1.19
DDX55-207ENST00000540763 ZNF713Q8N859 430 aaPredicted RBP22.47■■□□□ 1.19
DDX55-207ENST00000540763 NPLOC4Q8TAT6 608 aa22.47■■□□□ 1.19
DDX55-207ENST00000540763 TRIB2Q92519 343 aa22.47■■□□□ 1.19
DDX55-207ENST00000540763 PFKFB2O60825 505 aa22.46■■□□□ 1.19
DDX55-207ENST00000540763 NTRK3Q16288 839 aa22.46■■□□□ 1.19
DDX55-207ENST00000540763 TEX2Q8IWB9 1127 aa22.46■■□□□ 1.19
DDX55-207ENST00000540763 FAM133AQ8N9E0 248 aa22.46■■□□□ 1.19
DDX55-207ENST00000540763 MAML3Q96JK9 1138 aa22.46■■□□□ 1.19
DDX55-207ENST00000540763 RNF26Q9BY78 433 aaPredicted RBP22.46■■□□□ 1.19
DDX55-207ENST00000540763 SLKQ9H2G2 1235 aaPredicted RBP22.46■■□□□ 1.19
DDX55-207ENST00000540763 MCM3APO60318 1980 aa22.46■■□□□ 1.19
DDX55-207ENST00000540763 LRRC37A2A6NM11 1700 aa22.45■■□□□ 1.19
DDX55-207ENST00000540763 LOC102724159A0A0B4J2E5 919 aa22.45■■□□□ 1.18
DDX55-207ENST00000540763 POTEB2H3BUK9 544 aa22.45■■□□□ 1.18
DDX55-207ENST00000540763 PGK2P07205 417 aa22.45■■□□□ 1.18
DDX55-207ENST00000540763 TAL1P17542 331 aaPredicted RBP22.45■■□□□ 1.18
DDX55-207ENST00000540763 UBXN2AP68543 259 aa22.45■■□□□ 1.18
DDX55-207ENST00000540763 PWP2Q15269 919 aaKnown RBP22.45■■□□□ 1.18
DDX55-207ENST00000540763 CPLX2Q6PUV4 134 aaKnown RBP22.45■■□□□ 1.18
DDX55-207ENST00000540763 NSMFQ6X4W1 530 aa22.45■■□□□ 1.18
DDX55-207ENST00000540763 RNF207Q6ZRF8 634 aa22.45■■□□□ 1.18
DDX55-207ENST00000540763 CCDC82Q8N4S0 544 aa22.45■■□□□ 1.18
DDX55-207ENST00000540763 ZNF333Q96JL9 665 aa22.45■■□□□ 1.18
DDX55-207ENST00000540763 KIAA0100Q14667 2235 aaKnown RBP22.45■■□□□ 1.18
DDX55-207ENST00000540763 PRPF3O43395 683 aaKnown RBP22.44■■□□□ 1.18
DDX55-207ENST00000540763 ST18O60284 1047 aa22.44■■□□□ 1.18
DDX55-207ENST00000540763 ELNP15502 786 aa22.44■■□□□ 1.18
DDX55-207ENST00000540763 CCT2P78371 535 aaKnown RBP22.44■■□□□ 1.18
DDX55-207ENST00000540763 LARP6Q9BRS8 491 aaKnown RBP22.44■■□□□ 1.18
DDX55-207ENST00000540763 LIMCH1Q9UPQ0 1083 aa22.44■■□□□ 1.18
DDX55-207ENST00000540763 SYNGAP1Q96PV0 1343 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms