RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 FBXO16Q8IX29 292 aaPredicted RBP20.4■□□□□ 0.86
PDCD2-207ENST00000539212 GLT1D1Q96MS3 346 aa20.4■□□□□ 0.86
PDCD2-207ENST00000539212 TBX21Q9UL17 535 aa20.4■□□□□ 0.86
PDCD2-207ENST00000539212 DCDC2CA8MYV0 355 aa20.39■□□□□ 0.85
PDCD2-207ENST00000539212 FGAP02671 866 aa20.39■□□□□ 0.85
PDCD2-207ENST00000539212 MCMDC2Q4G0Z9 681 aa20.39■□□□□ 0.85
PDCD2-207ENST00000539212 TOX2Q96NM4 488 aa20.39■□□□□ 0.85
PDCD2-207ENST00000539212 CDX2Q99626 313 aaPredicted RBP20.39■□□□□ 0.85
PDCD2-207ENST00000539212 PDGFCQ9NRA1 345 aa20.39■□□□□ 0.85
PDCD2-207ENST00000539212 CYP39A1Q9NYL5 469 aa20.39■□□□□ 0.85
PDCD2-207ENST00000539212 CCPG1Q9ULG6 757 aa20.39■□□□□ 0.85
PDCD2-207ENST00000539212 PLA2G6O60733 806 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 FGRP09769 529 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 HSPD1P10809 573 aaKnown RBP20.38■□□□□ 0.85
PDCD2-207ENST00000539212 SMAD3P84022 425 aaKnown RBP20.38■□□□□ 0.85
PDCD2-207ENST00000539212 TNFAIP2Q03169 654 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 ALX1Q15699 326 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 TKFCQ3LXA3 575 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 PPP4R3BQ5MIZ7 849 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 NSMFQ6X4W1 530 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 NOL8Q76FK4 1167 aaKnown RBP20.38■□□□□ 0.85
PDCD2-207ENST00000539212 PCSK9Q8NBP7 692 aaKnown RBP20.38■□□□□ 0.85
PDCD2-207ENST00000539212 DCAF4Q8WV16 495 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 VTI1AQ96AJ9 217 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 TMEM47Q9BQJ4 181 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 SEMA6BQ9H3T3 888 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 SPC25Q9HBM1 224 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 GPCPD1Q9NPB8 672 aa20.38■□□□□ 0.85
PDCD2-207ENST00000539212 ELP1O95163 1332 aa20.37■□□□□ 0.85
PDCD2-207ENST00000539212 TRIM6-TRIM34B2RNG4 842 aa20.37■□□□□ 0.85
PDCD2-207ENST00000539212 SMPD1P17405 629 aa20.37■□□□□ 0.85
PDCD2-207ENST00000539212 CDK7P50613 346 aa20.37■□□□□ 0.85
PDCD2-207ENST00000539212 B4GALNT3Q6L9W6 998 aa20.37■□□□□ 0.85
PDCD2-207ENST00000539212 TLK2Q86UE8 772 aa20.37■□□□□ 0.85
PDCD2-207ENST00000539212 TBC1D10CQ8IV04 446 aa20.37■□□□□ 0.85
PDCD2-207ENST00000539212 MYLIPQ8WY64 445 aa20.37■□□□□ 0.85
PDCD2-207ENST00000539212 YTHDC1Q96MU7 727 aaKnown RBP20.37■□□□□ 0.85
PDCD2-207ENST00000539212 PPP1R12CQ9BZL4 782 aa20.37■□□□□ 0.85
PDCD2-207ENST00000539212 RANBP17Q9H2T7 1088 aaKnown RBP20.37■□□□□ 0.85
PDCD2-207ENST00000539212 GNEQ9Y223 722 aaKnown RBP20.37■□□□□ 0.85
PDCD2-207ENST00000539212 VCANP13611 3396 aa20.36■□□□□ 0.85
PDCD2-207ENST00000539212 CCDC171Q6TFL3 1326 aa20.36■□□□□ 0.85
PDCD2-207ENST00000539212 A0A0U1RQG5 324 aaPredicted RBP20.36■□□□□ 0.85
PDCD2-207ENST00000539212 ARVCFO00192 962 aa20.36■□□□□ 0.85
PDCD2-207ENST00000539212 TIMP1P01033 207 aa20.36■□□□□ 0.85
PDCD2-207ENST00000539212 ICAM1P05362 532 aa20.36■□□□□ 0.85
PDCD2-207ENST00000539212 CXCL17Q6UXB2 119 aa20.36■□□□□ 0.85
PDCD2-207ENST00000539212 FAM126BQ8IXS8 530 aa20.36■□□□□ 0.85
PDCD2-207ENST00000539212 RILPL2Q969X0 211 aa20.36■□□□□ 0.85
PDCD2-207ENST00000539212 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.36■□□□□ 0.85
PDCD2-207ENST00000539212 MYH6P13533 1939 aa20.35■□□□□ 0.85
PDCD2-207ENST00000539212 MROH7Q68CQ1 1323 aa20.35■□□□□ 0.85
PDCD2-207ENST00000539212 ASB14A6NK59 587 aa20.35■□□□□ 0.85
PDCD2-207ENST00000539212 NFIBO00712 420 aa20.35■□□□□ 0.85
PDCD2-207ENST00000539212 SYDE2Q5VT97 1194 aa20.35■□□□□ 0.85
PDCD2-207ENST00000539212 TAPT1Q6NXT6 567 aa20.35■□□□□ 0.85
PDCD2-207ENST00000539212 SLC30A10Q6XR72 485 aa20.35■□□□□ 0.85
PDCD2-207ENST00000539212 ZMYM6O95789 1325 aa20.34■□□□□ 0.85
PDCD2-207ENST00000539212 NEDD4P46934 1319 aa20.34■□□□□ 0.85
PDCD2-207ENST00000539212 TOP1P11387 765 aaKnown RBP20.34■□□□□ 0.85
PDCD2-207ENST00000539212 NKX3-2P78367 333 aa20.34■□□□□ 0.85
PDCD2-207ENST00000539212 BAATQ14032 418 aaPredicted RBP20.34■□□□□ 0.85
PDCD2-207ENST00000539212 MFSD5Q6N075 450 aa20.34■□□□□ 0.85
PDCD2-207ENST00000539212 C16orf59Q7L2K0 433 aa20.34■□□□□ 0.85
PDCD2-207ENST00000539212 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.34■□□□□ 0.85
PDCD2-207ENST00000539212 GRIN2DO15399 1336 aa20.33■□□□□ 0.85
PDCD2-207ENST00000539212 SPTBN5Q9NRC6 3674 aaKnown RBP20.33■□□□□ 0.85
PDCD2-207ENST00000539212 DYNC1LI2O43237 492 aaPredicted RBP20.33■□□□□ 0.85
PDCD2-207ENST00000539212 ACRP10323 421 aa20.33■□□□□ 0.85
PDCD2-207ENST00000539212 PDHBP11177 359 aa20.33■□□□□ 0.85
PDCD2-207ENST00000539212 CSF2RAP15509 400 aa20.33■□□□□ 0.85
PDCD2-207ENST00000539212 PSMC6P62333 389 aa20.33■□□□□ 0.85
PDCD2-207ENST00000539212 FSCN1Q16658 493 aaKnown RBP20.33■□□□□ 0.85
PDCD2-207ENST00000539212 BTNL9Q6UXG8 535 aa20.33■□□□□ 0.85
PDCD2-207ENST00000539212 ZKSCAN3Q9BRR0 538 aa20.33■□□□□ 0.85
PDCD2-207ENST00000539212 UMODL1Q5DID0 1318 aa20.32■□□□□ 0.84
PDCD2-207ENST00000539212 CD4P01730 458 aa20.32■□□□□ 0.84
PDCD2-207ENST00000539212 IGHDP01880 384 aa20.32■□□□□ 0.84
PDCD2-207ENST00000539212 CYP2C18P33260 490 aa20.32■□□□□ 0.84
PDCD2-207ENST00000539212 CPVLQ9H3G5 476 aa20.32■□□□□ 0.84
PDCD2-207ENST00000539212 TCP11L1Q9NUJ3 509 aa20.32■□□□□ 0.84
PDCD2-207ENST00000539212 SCN5AQ14524 2016 aa20.32■□□□□ 0.84
PDCD2-207ENST00000539212 PTPDC1A2A3K4 754 aa20.31■□□□□ 0.84
PDCD2-207ENST00000539212 GRXCR1A8MXD5 290 aa20.31■□□□□ 0.84
PDCD2-207ENST00000539212 SDSP20132 328 aa20.31■□□□□ 0.84
PDCD2-207ENST00000539212 ALDH5A1P51649 535 aaPredicted RBP20.31■□□□□ 0.84
PDCD2-207ENST00000539212 TMEM240Q5SV17 173 aa20.31■□□□□ 0.84
PDCD2-207ENST00000539212 AKNAD1Q5T1N1 836 aa20.31■□□□□ 0.84
PDCD2-207ENST00000539212 PLEKHM2Q8IWE5 1019 aa20.31■□□□□ 0.84
PDCD2-207ENST00000539212 SMC5Q8IY18 1101 aa20.31■□□□□ 0.84
PDCD2-207ENST00000539212 MAFAQ8NHW3 353 aaPredicted RBP20.31■□□□□ 0.84
PDCD2-207ENST00000539212 CLEC4DQ8WXI8 215 aa20.31■□□□□ 0.84
PDCD2-207ENST00000539212 COL25A1Q9BXS0 654 aaPredicted RBP20.31■□□□□ 0.84
PDCD2-207ENST00000539212 AP5M1Q9H0R1 490 aa20.31■□□□□ 0.84
PDCD2-207ENST00000539212 TLR3O15455 904 aaKnown RBP20.3■□□□□ 0.84
PDCD2-207ENST00000539212 GOLGA8HP0CJ92 632 aa20.3■□□□□ 0.84
PDCD2-207ENST00000539212 FOSL2P15408 326 aa20.3■□□□□ 0.84
PDCD2-207ENST00000539212 DNAJB2P25686 324 aa20.3■□□□□ 0.84
PDCD2-207ENST00000539212 CALML3P27482 149 aa20.3■□□□□ 0.84
PDCD2-207ENST00000539212 PBX2P40425 430 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms