RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 CEP128Q6ZU80 1094 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 GPIHBP1Q8IV16 184 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 WHAMMQ8TF30 809 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 KIFAP3Q92845 792 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 JAKMIP2Q96AA8 810 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 ATP6V1G3Q96LB4 118 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 AGAP3Q96P47 875 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 SYT15Q9BQS2 421 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 VCXQ9H320 206 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.11□□□□□ -0.47
DDX11-213ENST00000539049 WDR37Q9Y2I8 494 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 NFE2L3Q9Y4A8 694 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 FLOT1O75955 427 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 ATP1A1P05023 1023 aaKnown RBP12.11□□□□□ -0.47
DDX11-213ENST00000539049 VCAM1P19320 739 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 ZNF268Q14587 947 aaPredicted RBP12.11□□□□□ -0.47
DDX11-213ENST00000539049 LBRQ14739 615 aaKnown RBP12.11□□□□□ -0.47
DDX11-213ENST00000539049 PABPC1LQ4VXU2 614 aaKnown RBP12.11□□□□□ -0.47
DDX11-213ENST00000539049 RNF220Q5VTB9 566 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 KSR2Q6VAB6 950 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 SEPT14Q6ZU15 432 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 TMEM98Q9Y2Y6 226 aa12.11□□□□□ -0.47
DDX11-213ENST00000539049 HMGB1P1B2RPK0 211 aaPredicted RBP12.1□□□□□ -0.47
DDX11-213ENST00000539049 SYNE3Q6ZMZ3 975 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 HOOK3Q86VS8 718 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 ZNF496Q96IT1 587 aaPredicted RBP12.1□□□□□ -0.47
DDX11-213ENST00000539049 TMCO1Q9UM00 188 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 NALCNQ8IZF0 1738 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.1□□□□□ -0.47
DDX11-213ENST00000539049 PXDNLA1KZ92 1463 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 CCT8L1PA6NM43 557 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 TMCC1O94876 653 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 TMED1Q13445 227 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 SEPT2Q15019 361 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 IFI16Q16666 785 aaKnown RBP12.1□□□□□ -0.47
DDX11-213ENST00000539049 EMC10Q5UCC4 262 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 MICU3Q86XE3 530 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 KCNG4Q8TDN1 519 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 SLF1Q9BQI6 1058 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.1□□□□□ -0.477e-9■■■■□ 19.3
DDX11-213ENST00000539049 MOV10L1Q9BXT6 1211 aaKnown RBP12.1□□□□□ -0.47
DDX11-213ENST00000539049 DMAP1Q9NPF5 467 aaPredicted RBP12.1□□□□□ -0.47
DDX11-213ENST00000539049 DLGAP2Q9P1A6 1054 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 DMGDHQ9UI17 866 aaKnown RBP12.1□□□□□ -0.47
DDX11-213ENST00000539049 SH3TC1Q8TE82 1336 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 TMEM2Q9UHN6 1383 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 TRAPPC3O43617 180 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 CA8P35219 290 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 CABP4P57796 275 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 CBX3Q13185 183 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 ANKRD13DQ6ZTN6 518 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 RALYLQ86SE5 291 aaKnown RBP12.1□□□□□ -0.47
DDX11-213ENST00000539049 PROSER2Q86WR7 435 aaPredicted RBP12.1□□□□□ -0.47
DDX11-213ENST00000539049 ANKS4BQ8N8V4 417 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 RMDN2Q96LZ7 410 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 ANKRD27Q96NW4 1050 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 RPS6KC1Q96S38 1066 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 IWS1Q96ST2 819 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 NACA2Q9H009 215 aa12.1□□□□□ -0.47
DDX11-213ENST00000539049 ZNF233A6NK53 670 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 GCP02774 474 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 GSTA1P08263 222 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 PSMC4P43686 418 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
DDX11-213ENST00000539049 PAK2Q13177 524 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 SGSM1Q2NKQ1 1148 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 KLHL10Q6JEL2 608 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 CMTR1Q8N1G2 835 aaKnown RBP12.09□□□□□ -0.47
DDX11-213ENST00000539049 PRCCQ92733 491 aaPredicted RBP12.09□□□□□ -0.47
DDX11-213ENST00000539049 DDX27Q96GQ7 796 aaKnown RBP12.09□□□□□ -0.47
DDX11-213ENST00000539049 VCX3BQ9H321 246 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 VCX3AQ9NNX9 186 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 IFIT1P09914 478 aaKnown RBP12.09□□□□□ -0.47
DDX11-213ENST00000539049 PFKFB1P16118 471 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 RFC5P40937 340 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 SESN3P58005 492 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 KLC1Q07866 573 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 TMTC1Q8IUR5 882 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 CNGA4Q8IV77 575 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 HDAC7Q8WUI4 952 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 TUBE1Q9UJT0 475 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 ADAMTS13Q76LX8 1427 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 SPTLC2O15270 562 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 MFAP3LO75121 409 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 COBLO75128 1261 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 PENKP01210 267 aaPredicted RBP12.09□□□□□ -0.47
DDX11-213ENST00000539049 SP100P23497 879 aaPredicted RBP12.09□□□□□ -0.47
DDX11-213ENST00000539049 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
DDX11-213ENST00000539049 VAV2P52735 878 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 SLC7A5Q01650 507 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 ITGB3BPQ13352 177 aaPredicted RBP12.09□□□□□ -0.47
DDX11-213ENST00000539049 PNOCQ13519 176 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 EZH2Q15910 746 aaKnown RBP12.09□□□□□ -0.47
DDX11-213ENST00000539049 CCDC197Q8NCU1 140 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 ARHGEF10LQ9HCE6 1279 aa12.09□□□□□ -0.47
DDX11-213ENST00000539049 UTP6Q9NYH9 597 aaKnown RBP12.09□□□□□ -0.47
DDX11-213ENST00000539049 PTPDC1A2A3K4 754 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 SNAP23O00161 211 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 PSMD14O00487 310 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 ALADP13716 330 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms