RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 TNFAIP2Q03169 654 aa20.9■□□□□ 0.94
LTBR-206ENST00000536876 CCDC174Q6PII3 467 aa20.9■□□□□ 0.94
LTBR-206ENST00000536876 SEC62Q99442 399 aaKnown RBP20.9■□□□□ 0.94
LTBR-206ENST00000536876 NOC4LQ9BVI4 516 aaKnown RBP20.9■□□□□ 0.94
LTBR-206ENST00000536876 HIPK3Q9H422 1215 aa20.9■□□□□ 0.94
LTBR-206ENST00000536876 PDGFCQ9NRA1 345 aa20.9■□□□□ 0.94
LTBR-206ENST00000536876 COL4A4P53420 1690 aaPredicted RBP20.89■□□□□ 0.94
LTBR-206ENST00000536876 TMEM232C9JQI7 657 aa20.89■□□□□ 0.93
LTBR-206ENST00000536876 FOXP2O15409 715 aa20.89■□□□□ 0.93
LTBR-206ENST00000536876 FSCN1Q16658 493 aaKnown RBP20.89■□□□□ 0.93
LTBR-206ENST00000536876 TAPT1Q6NXT6 567 aa20.89■□□□□ 0.93
LTBR-206ENST00000536876 ATXN2LQ8WWM7 1075 aaKnown RBP20.89■□□□□ 0.93
LTBR-206ENST00000536876 CTDP1Q9Y5B0 961 aaPredicted RBP20.89■□□□□ 0.93
LTBR-206ENST00000536876 B4GALT4O60513 344 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 COL9A1P20849 921 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 STAT2P52630 851 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 SNAP25P60880 206 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 PSMC6P62333 389 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 ITGA7Q13683 1181 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 RAB30Q15771 203 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 MUM1L1Q5H9M0 696 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 FBXO16Q8IX29 292 aaPredicted RBP20.88■□□□□ 0.93
LTBR-206ENST00000536876 IFNL3Q8IZI9 196 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 ZNF444Q8N0Y2 327 aaPredicted RBP20.88■□□□□ 0.93
LTBR-206ENST00000536876 CHMP4CQ96CF2 233 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 GMCL1Q96IK5 515 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 ASB2Q96Q27 587 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 PURBQ96QR8 312 aaKnown RBP20.88■□□□□ 0.93
LTBR-206ENST00000536876 TRPV6Q9H1D0 765 aa20.88■□□□□ 0.93
LTBR-206ENST00000536876 RABGGTBP53611 331 aa20.87■□□□□ 0.93
LTBR-206ENST00000536876 CCL23P55773 120 aa20.87■□□□□ 0.93
LTBR-206ENST00000536876 CCDC85BQ15834 202 aaPredicted RBP20.87■□□□□ 0.93
LTBR-206ENST00000536876 OTOP2Q7RTS6 562 aa20.87■□□□□ 0.93
LTBR-206ENST00000536876 ADAMTS19Q8TE59 1207 aa20.87■□□□□ 0.93
LTBR-206ENST00000536876 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.87■□□□□ 0.93
LTBR-206ENST00000536876 PRRC2BQ5JSZ5 2229 aaKnown RBP20.87■□□□□ 0.93
LTBR-206ENST00000536876 TET1Q8NFU7 2136 aa20.86■□□□□ 0.93
LTBR-206ENST00000536876 PATL2C9JE40 543 aaKnown RBP20.86■□□□□ 0.93
LTBR-206ENST00000536876 FDX1P10109 184 aa20.86■□□□□ 0.93
LTBR-206ENST00000536876 MYOGP15173 224 aa20.86■□□□□ 0.93
LTBR-206ENST00000536876 GNAT2P19087 354 aa20.86■□□□□ 0.93
LTBR-206ENST00000536876 STAG1Q8WVM7 1258 aa20.86■□□□□ 0.93
LTBR-206ENST00000536876 CYP39A1Q9NYL5 469 aa20.86■□□□□ 0.93
LTBR-206ENST00000536876 MSRAQ9UJ68 235 aa20.86■□□□□ 0.93
LTBR-206ENST00000536876 ASB14A6NK59 587 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 CABYRO75952 493 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 FGBP02675 491 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 ZFYP08048 801 aaPredicted RBP20.85■□□□□ 0.93
LTBR-206ENST00000536876 TSPY3P0CV98 308 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 TSPY8P0CW00 308 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 TFAP4Q01664 338 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 PPARAQ07869 468 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 KCTD1Q719H9 257 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 FAM160B2Q86V87 743 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 MORC4Q8TE76 937 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 TRERF1Q96PN7 1200 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 IL17RBQ9NRM6 502 aa20.85■□□□□ 0.93
LTBR-206ENST00000536876 DYNC1LI2O43237 492 aaPredicted RBP20.84■□□□□ 0.93
LTBR-206ENST00000536876 NMT2O60551 498 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 PLA2G6O60733 806 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 APPP05067 770 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 ALAS1P13196 640 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 IGFBP4P22692 258 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 MCCP23508 829 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 TKFCQ3LXA3 575 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 NOL8Q76FK4 1167 aaKnown RBP20.84■□□□□ 0.93
LTBR-206ENST00000536876 EEPD1Q7L9B9 569 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 SCLYQ96I15 445 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 DCTPP1Q9H773 170 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 ZNF287Q9HBT7 754 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 INCENPQ9NQS7 918 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 PRR12Q9ULL5 1215 aa20.84■□□□□ 0.93
LTBR-206ENST00000536876 SLC1A4P43007 532 aa20.83■□□□□ 0.93
LTBR-206ENST00000536876 PI4K2BQ8TCG2 481 aa20.83■□□□□ 0.93
LTBR-206ENST00000536876 OTUD7AQ8TE49 926 aaPredicted RBP20.83■□□□□ 0.93
LTBR-206ENST00000536876 NECAB3Q96P71 396 aaPredicted RBP20.83■□□□□ 0.93
LTBR-206ENST00000536876 ALDH8A1Q9H2A2 487 aaPredicted RBP20.83■□□□□ 0.93
LTBR-206ENST00000536876 NOVP48745 357 aa20.82■□□□□ 0.92
LTBR-206ENST00000536876 MRPS5P82675 430 aaKnown RBP20.82■□□□□ 0.92
LTBR-206ENST00000536876 PDE4BQ07343 736 aa20.82■□□□□ 0.92
LTBR-206ENST00000536876 TTLL4Q14679 1199 aa20.82■□□□□ 0.92
LTBR-206ENST00000536876 ZMYM1Q5SVZ6 1142 aa20.82■□□□□ 0.92
LTBR-206ENST00000536876 CHURC1Q8WUH1 139 aa20.82■□□□□ 0.92
LTBR-206ENST00000536876 UHRF1Q96T88 793 aaPredicted RBP20.82■□□□□ 0.92
LTBR-206ENST00000536876 MTIF3Q9H2K0 278 aaKnown RBP20.82■□□□□ 0.92
LTBR-206ENST00000536876 CHMP4BQ9H444 224 aaKnown RBP20.82■□□□□ 0.92
LTBR-206ENST00000536876 SLC28A3Q9HAS3 691 aa20.82■□□□□ 0.92
LTBR-206ENST00000536876 TRMT13Q9NUP7 481 aaKnown RBP20.82■□□□□ 0.92
LTBR-206ENST00000536876 ISY1Q9ULR0 285 aaKnown RBP20.82■□□□□ 0.92
LTBR-206ENST00000536876 Q9Y3F1 56 aa20.82■□□□□ 0.92
LTBR-206ENST00000536876 TRIP12Q14669 1992 aaPredicted RBP20.81■□□□□ 0.92
LTBR-206ENST00000536876 IQSEC1Q6DN90 963 aa20.81■□□□□ 0.92
LTBR-206ENST00000536876 AP5M1Q9H0R1 490 aa20.81■□□□□ 0.92
LTBR-206ENST00000536876 VTA1Q9NP79 307 aa20.81■□□□□ 0.92
LTBR-206ENST00000536876 RCAN3Q9UKA8 241 aa20.81■□□□□ 0.92
LTBR-206ENST00000536876 EPOPA6NHQ4 379 aa20.8■□□□□ 0.92
LTBR-206ENST00000536876 ARHGEF15O94989 841 aa20.8■□□□□ 0.92
LTBR-206ENST00000536876 CTDSPL2Q05D32 466 aa20.8■□□□□ 0.92
LTBR-206ENST00000536876 IKQ13123 557 aaPredicted RBP20.8■□□□□ 0.92
LTBR-206ENST00000536876 PPP2R2DQ66LE6 453 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms