RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 USP28Q96RU2 1077 aa8.07□□□□□ -1.12
SOX6-215ENST00000533411 WDR18Q9BV38 432 aa8.07□□□□□ -1.12
SOX6-215ENST00000533411 ASCC2Q9H1I8 757 aaPredicted RBP8.07□□□□□ -1.12
SOX6-215ENST00000533411 NUP62CLQ9H1M0 184 aa8.07□□□□□ -1.12
SOX6-215ENST00000533411 TSPY26PQ9H489 355 aa8.07□□□□□ -1.12
SOX6-215ENST00000533411 BRMS1Q9HCU9 246 aa8.07□□□□□ -1.12
SOX6-215ENST00000533411 TCP11L1Q9NUJ3 509 aa8.07□□□□□ -1.12
SOX6-215ENST00000533411 POLR3EQ9NVU0 708 aa8.07□□□□□ -1.12
SOX6-215ENST00000533411 RTEL1Q9NZ71 1219 aa8.07□□□□□ -1.12
SOX6-215ENST00000533411 TFIP11Q9UBB9 837 aaKnown RBP8.07□□□□□ -1.12
SOX6-215ENST00000533411 SRRDQ9UH36 339 aa8.07□□□□□ -1.12
SOX6-215ENST00000533411 GABRQQ9UN88 632 aa8.07□□□□□ -1.12
SOX6-215ENST00000533411 TNRC18O15417 2968 aaPredicted RBP8.07□□□□□ -1.12
SOX6-215ENST00000533411 MYPNQ86TC9 1320 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 PLXNB2O15031 1838 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 CENPFP49454 3210 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 BAZ2BQ9UIF8 2168 aaKnown RBP8.06□□□□□ -1.12
SOX6-215ENST00000533411 USP17L10C9JJH3 530 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 PRPF3O43395 683 aaKnown RBP8.06□□□□□ -1.12
SOX6-215ENST00000533411 PLEKHA8P1O95397 391 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 MMP1P03956 469 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 ME1P48163 572 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 NASPP49321 788 aaPredicted RBP8.06□□□□□ -1.12
SOX6-215ENST00000533411 CEBPZQ03701 1054 aaKnown RBP8.06□□□□□ -1.12
SOX6-215ENST00000533411 PRKCZQ05513 592 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 GRM4Q14833 912 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 SEPT2Q15019 361 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 SF3A1Q15459 793 aaKnown RBP8.06□□□□□ -1.12
SOX6-215ENST00000533411 ABCB5Q2M3G0 1257 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
SOX6-215ENST00000533411 NBPF11Q86T75 865 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 CLEC10AQ8IUN9 316 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 DIS3L2Q8IYB7 885 aaKnown RBP8.06□□□□□ -1.12
SOX6-215ENST00000533411 NEDD1Q8NHV4 660 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 ACER1Q8TDN7 264 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 ANKS1AQ92625 1134 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 ZNF333Q96JL9 665 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 FOXP1Q9H334 677 aaPredicted RBP8.06□□□□□ -1.12
SOX6-215ENST00000533411 EMILIN3Q9NT22 766 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 TMOD4Q9NZQ9 345 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 STX8Q9UNK0 236 aa8.06□□□□□ -1.12
SOX6-215ENST00000533411 KIF28PB7ZC32 967 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 C19orf81C9J6K1 198 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 MPHOSPH10O00566 681 aaKnown RBP8.05□□□□□ -1.12
SOX6-215ENST00000533411 TNPO2O14787 897 aaKnown RBP8.05□□□□□ -1.12
SOX6-215ENST00000533411 GNRH1P01148 92 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 TOP1P11387 765 aaKnown RBP8.05□□□□□ -1.12
SOX6-215ENST00000533411 EN2P19622 333 aaPredicted RBP8.05□□□□□ -1.12
SOX6-215ENST00000533411 U2AF2P26368 475 aaKnown RBP eCLIP8.05□□□□□ -1.12
SOX6-215ENST00000533411 KRT2P35908 639 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 FCGRTP55899 365 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 IRX3P78415 501 aaPredicted RBP8.05□□□□□ -1.12
SOX6-215ENST00000533411 MTFR1Q15390 333 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 ANO1Q5XXA6 986 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 RCSD1Q6JBY9 416 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 POTEEQ6S8J3 1075 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 NOSTRINQ8IVI9 506 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 FAM177A1Q8N128 213 aaPredicted RBP8.05□□□□□ -1.12
SOX6-215ENST00000533411 CCDC82Q8N4S0 544 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 CCDC148Q8NFR7 591 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 RAET1EQ8TD07 263 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 P2RX7Q99572 595 aaKnown RBP8.05□□□□□ -1.12
SOX6-215ENST00000533411 FEZ1Q99689 392 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 LZTS2Q9BRK4 669 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 FTOQ9C0B1 505 aaKnown RBP eCLIP8.05□□□□□ -1.12
SOX6-215ENST00000533411 TXNRD2Q9NNW7 524 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 GINM1Q9NU53 330 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 RCOR1Q9UKL0 485 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
SOX6-215ENST00000533411 KIAA0100Q14667 2235 aaKnown RBP8.05□□□□□ -1.12
SOX6-215ENST00000533411 A0A1W2PQ27 194 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 A0A1W2PQ64 194 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 A0A1W2PQD8 194 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 A0A1W2PRG0 241 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 TTLL13PA6NNM8 815 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 SPTLC2O15270 562 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 KINO60870 393 aaKnown RBP8.04□□□□□ -1.12
SOX6-215ENST00000533411 SCG2P13521 617 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 AKR1B1P15121 316 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 ELNP15502 786 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 LIG1P18858 919 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 CALML3P27482 149 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 HOXD10P28358 340 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 HOXA7P31268 230 aaPredicted RBP8.04□□□□□ -1.12
SOX6-215ENST00000533411 GRK4P32298 578 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 FLT3LGP49771 235 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 HERVK_113P62684 666 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 FUT2Q10981 343 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 PABPC4Q13310 644 aaKnown RBP eCLIP8.04□□□□□ -1.12
SOX6-215ENST00000533411 FAM110CQ1W6H9 321 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 RILPL1Q5EBL4 403 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 USP17L2Q6R6M4 530 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 GAS2L3Q86XJ1 694 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 CMTR1Q8N1G2 835 aaKnown RBP8.04□□□□□ -1.12
SOX6-215ENST00000533411 FSIP1Q8NA03 581 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 LINC00301Q8NCQ3 95 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 MRPS27Q92552 414 aaKnown RBP8.04□□□□□ -1.12
SOX6-215ENST00000533411 PGBD1Q96JS3 809 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 TMEM47Q9BQJ4 181 aa8.04□□□□□ -1.12
SOX6-215ENST00000533411 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms