RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 TMEM31Q5JXX7 168 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 NOL8Q76FK4 1167 aaKnown RBP14.85□□□□□ -0.03
CAPN1-223ENST00000533079 MKL1Q969V6 931 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 SLC9A7Q96T83 725 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 MTCH2Q9Y6C9 303 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 MCM3APO60318 1980 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 PLIN4Q96Q06 1357 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 IGKV6D-41A0A0C4DH26 115 aa14.84□□□□□ -0.03
CAPN1-223ENST00000533079 RAB11FIP3O75154 756 aa14.84□□□□□ -0.03
CAPN1-223ENST00000533079 HMMRO75330 724 aa14.84□□□□□ -0.03
CAPN1-223ENST00000533079 ACTN1P12814 892 aa14.84□□□□□ -0.03
CAPN1-223ENST00000533079 RFC2P35250 354 aa14.84□□□□□ -0.03
CAPN1-223ENST00000533079 PHOSPHO2Q8TCD6 241 aa14.84□□□□□ -0.03
CAPN1-223ENST00000533079 AGBL1Q96MI9 1066 aa14.84□□□□□ -0.03
CAPN1-223ENST00000533079 LRFN3Q9BTN0 628 aa14.84□□□□□ -0.03
CAPN1-223ENST00000533079 A1CFQ9NQ94 594 aaKnown RBP14.84□□□□□ -0.03
CAPN1-223ENST00000533079 GRIN2DO15399 1336 aa14.84□□□□□ -0.03
CAPN1-223ENST00000533079 COL4A4P53420 1690 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-223ENST00000533079 TTLL1O95922 423 aa14.83□□□□□ -0.04
CAPN1-223ENST00000533079 CA3P07451 260 aa14.83□□□□□ -0.04
CAPN1-223ENST00000533079 STAT2P52630 851 aa14.83□□□□□ -0.04
CAPN1-223ENST00000533079 IQSEC1Q6DN90 963 aa14.83□□□□□ -0.04
CAPN1-223ENST00000533079 TRPV6Q9H1D0 765 aa14.83□□□□□ -0.04
CAPN1-223ENST00000533079 ALDH8A1Q9H2A2 487 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-223ENST00000533079 BOLA2Q9H3K6 86 aa14.83□□□□□ -0.04
CAPN1-223ENST00000533079 HOMER2Q9NSB8 354 aa14.83□□□□□ -0.04
CAPN1-223ENST00000533079 CLIP2Q9UDT6 1046 aa14.83□□□□□ -0.04
CAPN1-223ENST00000533079 COG6Q9Y2V7 657 aa14.83□□□□□ -0.04
CAPN1-223ENST00000533079 GTF3C3Q9Y5Q9 886 aa14.83□□□□□ -0.04
CAPN1-223ENST00000533079 GPR37L1O60883 481 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 BMP3P12645 472 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 MYOGP15173 224 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 SMPD1P17405 629 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 CNTN2Q02246 1040 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 SLFNL1Q499Z3 407 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 FAM160B2Q86V87 743 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 HLA-CQ95604 372 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 PUS7LQ9H0K6 701 aaKnown RBP14.82□□□□□ -0.04
CAPN1-223ENST00000533079 VTA1Q9NP79 307 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 RNF146Q9NTX7 359 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 POLR3EQ9NVU0 708 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 MTMR4Q9NYA4 1195 aa14.82□□□□□ -0.04
CAPN1-223ENST00000533079 LOC102724159A0A0B4J2E5 919 aa14.81□□□□□ -0.04
CAPN1-223ENST00000533079 SOWAHBA6NEL2 793 aa14.81□□□□□ -0.04
CAPN1-223ENST00000533079 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
CAPN1-223ENST00000533079 DYNC1LI2O43237 492 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-223ENST00000533079 TLL1O43897 1013 aa14.81□□□□□ -0.04
CAPN1-223ENST00000533079 PWP2Q15269 919 aaKnown RBP14.81□□□□□ -0.04
CAPN1-223ENST00000533079 VWCEQ96DN2 955 aa14.81□□□□□ -0.04
CAPN1-223ENST00000533079 CEP95Q96GE4 821 aa14.81□□□□□ -0.04
CAPN1-223ENST00000533079 SCLYQ96I15 445 aa14.81□□□□□ -0.04
CAPN1-223ENST00000533079 GMCL1Q96IK5 515 aa14.81□□□□□ -0.04
CAPN1-223ENST00000533079 NCOR1O75376 2440 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 KIF28PB7ZC32 967 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 PLA2G6O60733 806 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 BAIAP3O94812 1187 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 GNAT2P19087 354 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 CPT1AP50416 773 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 PSMC6P62333 389 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 TTLL4Q14679 1199 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 PPP4R3BQ5MIZ7 849 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 TAPT1Q6NXT6 567 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 ZNF444Q8N0Y2 327 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-223ENST00000533079 MORC4Q8TE76 937 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 CHURC1Q8WUH1 139 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 STRBPQ96SI9 672 aaKnown RBP14.8□□□□□ -0.04
CAPN1-223ENST00000533079 EPHX3Q9H6B9 360 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 ZNF536O15090 1300 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 TNKSO95271 1327 aa14.8□□□□□ -0.04
CAPN1-223ENST00000533079 TCF20Q9UGU0 1960 aaKnown RBP14.8□□□□□ -0.04
CAPN1-223ENST00000533079 GSG1L2A8MUP6 293 aa14.79□□□□□ -0.04
CAPN1-223ENST00000533079 TAP1Q03518 808 aa14.79□□□□□ -0.04
CAPN1-223ENST00000533079 DUSP28Q4G0W2 176 aa14.79□□□□□ -0.04
CAPN1-223ENST00000533079 SLFN13Q68D06 897 aa14.79□□□□□ -0.04
CAPN1-223ENST00000533079 FBXO16Q8IX29 292 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-223ENST00000533079 LRRC47Q8N1G4 583 aaKnown RBP14.79□□□□□ -0.04
CAPN1-223ENST00000533079 RAD50Q92878 1312 aa14.79□□□□□ -0.04
CAPN1-223ENST00000533079 TRERF1Q96PN7 1200 aa14.79□□□□□ -0.04
CAPN1-223ENST00000533079 CYP39A1Q9NYL5 469 aa14.79□□□□□ -0.04
CAPN1-223ENST00000533079 LMCD1Q9NZU5 365 aa14.79□□□□□ -0.04
CAPN1-223ENST00000533079 MINDY4BA8MYZ0 360 aa14.78□□□□□ -0.04
CAPN1-223ENST00000533079 TMEM232C9JQI7 657 aa14.78□□□□□ -0.04
CAPN1-223ENST00000533079 CHGBP05060 677 aa14.78□□□□□ -0.04
CAPN1-223ENST00000533079 MS4A1P11836 297 aa14.78□□□□□ -0.04
CAPN1-223ENST00000533079 PURAQ00577 322 aaKnown RBP14.78□□□□□ -0.04
CAPN1-223ENST00000533079 IKQ13123 557 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-223ENST00000533079 BRDTQ58F21 947 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-223ENST00000533079 HERC6Q8IVU3 1022 aa14.78□□□□□ -0.04
CAPN1-223ENST00000533079 STAG1Q8WVM7 1258 aa14.78□□□□□ -0.04
CAPN1-223ENST00000533079 ARNTL2Q8WYA1 636 aa14.78□□□□□ -0.04
CAPN1-223ENST00000533079 TRMT13Q9NUP7 481 aaKnown RBP14.78□□□□□ -0.04
CAPN1-223ENST00000533079 ADD3Q9UEY8 706 aaKnown RBP14.78□□□□□ -0.04
CAPN1-223ENST00000533079 LCTP09848 1927 aa14.78□□□□□ -0.04
CAPN1-223ENST00000533079 EPOPA6NHQ4 379 aa14.77□□□□□ -0.05
CAPN1-223ENST00000533079 TSPY3P0CV98 308 aa14.77□□□□□ -0.05
CAPN1-223ENST00000533079 TSPY8P0CW00 308 aa14.77□□□□□ -0.05
CAPN1-223ENST00000533079 ALAS1P13196 640 aa14.77□□□□□ -0.05
CAPN1-223ENST00000533079 SLC1A4P43007 532 aa14.77□□□□□ -0.05
CAPN1-223ENST00000533079 TDO2P48775 406 aa14.77□□□□□ -0.05
CAPN1-223ENST00000533079 PTPN11Q06124 597 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms