RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 CNTNAP5Q8WYK1 1306 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 CYTH3O43739 400 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 IFNAR1P17181 557 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 PTPREP23469 700 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 CDC27P30260 824 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 ADD1P35611 737 aaKnown RBP13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 RGS2P41220 211 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 OTOP1Q7RTM1 612 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 NBPF11Q86T75 865 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 MCF2L2Q86YR7 1114 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 CMTR1Q8N1G2 835 aaKnown RBP13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 RAET1EQ8TD07 263 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 PIBF1Q8WXW3 757 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 RNF26Q9BY78 433 aaPredicted RBP13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 ARHGAP39Q9C0H5 1083 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 NCOA5Q9HCD5 579 aaKnown RBP13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 SRRDQ9UH36 339 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 PCDHA1Q9Y5I3 950 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 MYH6P13533 1939 aa13.68□□□□□ -0.22
PPFIA1-220ENST00000532024 CASP8AP2Q9UKL3 1982 aa13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 PLXNB2O15031 1838 aa13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 GRB14Q14449 540 aa13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 HEATR3Q7Z4Q2 680 aa13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 DPP9Q86TI2 863 aa13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 TRMT44Q8IYL2 757 aaKnown RBP13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 CCDC12Q8WUD4 166 aaPredicted RBP13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 GTF3C6Q969F1 213 aa13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 RIPK3Q9Y572 518 aa13.67□□□□□ -0.22
PPFIA1-220ENST00000532024 RBBP6Q7Z6E9 1792 aaKnown RBP13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 ADORA2AP29274 412 aa13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 PRKCZQ05513 592 aa13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 MAP2K5Q13163 448 aa13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 ME3Q16798 604 aa13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 PPP1R18Q6NYC8 613 aa13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 NSMFQ6X4W1 530 aa13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 WASF1Q92558 559 aa13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 MPHOSPH6Q99547 160 aaKnown RBP13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 APBA2Q99767 749 aa13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 SLC26A6Q9BXS9 759 aa13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 V9GY48 417 aaPredicted RBP13.66□□□□□ -0.22
PPFIA1-220ENST00000532024 ZSWIM8A7E2V4 1837 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 PTPDC1A2A3K4 754 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 PRPF3O43395 683 aaKnown RBP13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 DEXIO95424 95 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 XRCC5P13010 732 aaKnown RBP13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 SCG2P13521 617 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 CTGFP29279 349 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 FLT3LGP49771 235 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 FUT2Q10981 343 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 SCRN1Q12765 414 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 IRF5Q13568 498 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 SLC35G1Q2M3R5 365 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 MORN1Q5T089 497 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 FBXO46Q6PJ61 603 aaPredicted RBP13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 RNF207Q6ZRF8 634 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 TEX2Q8IWB9 1127 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 SAMD3Q8N6K7 520 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 SLAIN1Q8ND83 568 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 RGS22Q8NE09 1264 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 PHKBQ93100 1093 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 GLT8D2Q9H1C3 349 aa13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 MAP3K20Q9NYL2 800 aaKnown RBP13.65□□□□□ -0.22
PPFIA1-220ENST00000532024 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 hCG_1642624A0A1W2PR95 340 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 B4DLN1 442 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 POTEB2H3BUK9 544 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 NFIBO00712 420 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 PPP1R11O60927 126 aaPredicted RBP13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 HOXC6P09630 235 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 XBP1P17861 261 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 NAPAP54920 295 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 NTRK3Q16288 839 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 PFKFB3Q16875 520 aaPredicted RBP13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 NECAB1Q8N987 351 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 CCDC148Q8NFR7 591 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 CUL5Q93034 780 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 LLPHQ9BRT6 129 aaKnown RBP13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 A1CFQ9NQ94 594 aaKnown RBP13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 ADD3Q9UEY8 706 aaKnown RBP13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 DIS3Q9Y2L1 958 aaKnown RBP13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 PTPN22Q9Y2R2 807 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 KIF3AQ9Y496 699 aa13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 BAZ2BQ9UIF8 2168 aaKnown RBP13.64□□□□□ -0.23
PPFIA1-220ENST00000532024 ADCY3O60266 1144 aa13.63□□□□□ -0.23
PPFIA1-220ENST00000532024 LARGE1O95461 756 aa13.63□□□□□ -0.23
PPFIA1-220ENST00000532024 CFBP00751 764 aa13.63□□□□□ -0.23
PPFIA1-220ENST00000532024 CYP2B6P20813 491 aa13.63□□□□□ -0.23
PPFIA1-220ENST00000532024 SLC9C1Q4G0N8 1177 aa13.63□□□□□ -0.23
PPFIA1-220ENST00000532024 CCDC83Q8IWF9 413 aa13.63□□□□□ -0.23
PPFIA1-220ENST00000532024 FAM177A1Q8N128 213 aaPredicted RBP13.63□□□□□ -0.23
PPFIA1-220ENST00000532024 PXYLP1Q8TE99 480 aa13.63□□□□□ -0.23
PPFIA1-220ENST00000532024 CLEC4DQ8WXI8 215 aa13.63□□□□□ -0.23
PPFIA1-220ENST00000532024 BARHL2Q9NY43 387 aa13.63□□□□□ -0.23
PPFIA1-220ENST00000532024 CYP39A1Q9NYL5 469 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms