RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 BRF1Q92994 677 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 MAML3Q96JK9 1138 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 TCEANC2Q96MN5 208 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 MYL10Q9BUA6 226 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 SPZ1Q9BXG8 430 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 TM6SF1Q9BZW5 370 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 MAF1Q9H063 256 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 UNC93B1Q9H1C4 597 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 CPVLQ9H3G5 476 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 NRBP1Q9UHY1 535 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 MAD2L2Q9UI95 211 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 RIPK3Q9Y572 518 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 GTF3C3Q9Y5Q9 886 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 ZSWIM8A7E2V4 1837 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 ZNF236Q9UL36 1845 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 SYNGAP1Q96PV0 1343 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 PNMA6FA0A0J9YX94 578 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 NFIBO00712 420 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 COBLO75128 1261 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 TFRCP02786 760 aaKnown RBP6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 RXRAP19793 462 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 CALML3P27482 149 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 CYP2C19P33261 490 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 EXOSC10Q01780 885 aaKnown RBP6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 AKAP17AQ02040 695 aaKnown RBP6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 CACNB2Q08289 660 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 MTFR1Q15390 333 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 ZNF792Q3KQV3 632 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 MUM1L1Q5H9M0 696 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 Q6ZUG5 572 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 TMTC3Q6ZXV5 915 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 RAB11FIP4Q86YS3 637 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 NPLOC4Q8TAT6 608 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 U2AF1L4Q8WU68 220 aaKnown RBP6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 PIBF1Q8WXW3 757 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 CUL5Q93034 780 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 DEFB118Q96PH6 123 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 TINF2Q9BSI4 451 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 UPF3BQ9BZI7 483 aaKnown RBP6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 RIOX1Q9H6W3 641 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 JMJD4Q9H9V9 463 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 SENP2Q9HC62 589 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 ZSWIM6Q9HCJ5 1215 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 A1CFQ9NQ94 594 aaKnown RBP6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 GPHNQ9NQX3 736 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 PDRG1Q9NUG6 133 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 CYP39A1Q9NYL5 469 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 RBM27Q9P2N5 1060 aaKnown RBP6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 ZHX1Q9UKY1 873 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 PCDHA1Q9Y5I3 950 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 MGAMO43451 1857 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 PCNTO95613 3336 aa6.25□□□□□ -1.41
HMGB1P40-201ENST00000525121 DNAJC25-GNG10A0A024R161 153 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 LOC102724159A0A0B4J2E5 919 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 hCG_1984214I3L0E3 225 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 CPLX1O14810 134 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 PLEKHA8P1O95397 391 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 SGPL1O95470 568 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 CFBP00751 764 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 RARBP10826 455 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 AKR1A1P14550 325 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 CPA1P15085 419 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 GJA8P48165 433 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 PDE4DQ08499 809 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 APOBRQ0VD83 1088 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 TRIM32Q13049 653 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 BAATQ14032 418 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 PWP2Q15269 919 aaKnown RBP6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 MAP3K21Q5TCX8 1036 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 SLC30A10Q6XR72 485 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 HEATR3Q7Z4Q2 680 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 TRIM22Q8IYM9 498 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 FBXL16Q8N461 479 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 SAMD3Q8N6K7 520 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 ZNF713Q8N859 430 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 FAM133AQ8N9E0 248 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 RGS22Q8NE09 1264 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 DNERQ8NFT8 737 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 PIGSQ96S52 555 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 ABHD16BQ9H3Z7 469 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 EHMT1Q9H9B1 1298 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 SPC25Q9HBM1 224 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 PAK6Q9NQU5 681 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 MAP3K20Q9NYL2 800 aaKnown RBP6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 FLRT1Q9NZU1 646 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 DDX20Q9UHI6 824 aaKnown RBP6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 RLFQ13129 1914 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 PLXNB2O15031 1838 aa6.24□□□□□ -1.41
HMGB1P40-201ENST00000525121 PARP14Q460N5 1801 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 POTEFA5A3E0 1075 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 KBTBD13C9JR72 458 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 GCOM1H8Y6P7 765 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 SEPT4O43236 478 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 CDKL5O76039 1030 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 FARP2O94887 1054 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 MYCNP04198 464 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 POLR2MP0CAP2 368 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 CYBAP13498 195 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 TAL1P17542 331 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms