RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	MICAL1	Q8TDZ2	1067 aa		6.63	□□□□□ -1.35
PABPC1-223	ENST00000523636	UBXN4	Q92575	508 aa		6.63	□□□□□ -1.35
PABPC1-223	ENST00000523636	IRF7	Q92985	503 aa		6.63	□□□□□ -1.35
PABPC1-223	ENST00000523636	MYH16	Q9H6N6	1097 aa		6.63	□□□□□ -1.35
PABPC1-223	ENST00000523636	MBIP	Q9NS73	344 aa		6.63	□□□□□ -1.35
PABPC1-223	ENST00000523636	TMEM63C	Q9P1W3	806 aa		6.63	□□□□□ -1.35
PABPC1-223	ENST00000523636	PLXNA1	Q9UIW2	1896 aa		6.63	□□□□□ -1.35
PABPC1-223	ENST00000523636	RALY	Q9UKM9	306 aa	Known RBP	6.63	□□□□□ -1.35
PABPC1-223	ENST00000523636	SUGT1	Q9Y2Z0	365 aa		6.63	□□□□□ -1.35
PABPC1-223	ENST00000523636	AK9	Q5TCS8	1911 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	IBTK	Q9P2D0	1353 aa	Predicted RBP	6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	KCNQ3	O43525	872 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	CPNE3	O75131	537 aa	Known RBP	6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	PHACTR2	O75167	634 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	SIN3B	O75182	1162 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	RARA	P10276	462 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	COL6A1	P12109	1028 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	BMP4	P12644	408 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	PTMS	P20962	102 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	TARS	P26639	723 aa	Known RBP	6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	NF2	P35240	595 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	MAP2K3	P46734	347 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	ATP2B2	Q01814	1243 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	AKNAD1	Q5T1N1	836 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	ALG1L	Q6GMV1	187 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	GPR161	Q8N6U8	529 aa	Known RBP	6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	OR13H1	Q8NG92	308 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	FBF1	Q8TES7	1133 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	C11orf49	Q9H6J7	331 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	TLR7	Q9NYK1	1049 aa	Known RBP	6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	ZFAT	Q9P243	1243 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	PRR12	Q9ULL5	1215 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	ZNF652	Q9Y2D9	606 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	FRMPD3	Q5JV73	1810 aa		6.62	□□□□□ -1.35
PABPC1-223	ENST00000523636	CCL15-CCL14	A0A0B4J2E2	113 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	BTBD19	C9JJ37	291 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	C2CD2L	O14523	706 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	EIF1AY	O14602	144 aa	Known RBP	6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	MMP20	O60882	483 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	PRPF40A	O75400	957 aa	Known RBP	6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	USP2	O75604	605 aa	Predicted RBP	6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	ARAF	P10398	606 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	NFKB1	P19838	968 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	ITGB8	P26012	769 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	MAPK8	P45983	427 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	ORC1	Q13415	861 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	PDE3A	Q14432	1141 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	CCDC85B	Q15834	202 aa	Predicted RBP	6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	PCSK7	Q16549	785 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	CCL15	Q16663	113 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	GORAB	Q5T7V8	394 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	GIMAP6	Q6P9H5	292 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	ZNF790	Q6PG37	636 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	ZNF662	Q6ZS27	426 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	AGBL3	Q8NEM8	1001 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	BHMT	Q93088	406 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	OPTN	Q96CV9	577 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	CHRD	Q9H2X0	955 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	CPA4	Q9UI42	421 aa		6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	FOXD3	Q9UJU5	478 aa	Predicted RBP	6.61	□□□□□ -1.35
PABPC1-223	ENST00000523636	CEP250	Q9BV73	2442 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	LOC400499	M0QZD8	3231 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	PNMA6F	A0A0J9YX94	578 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	MED19	A0JLT2	244 aa	Predicted RBP	6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	ADCY3	O60266	1144 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	BBOX1	O75936	387 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	SASH1	O94885	1247 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	LDHB	P07195	334 aa	Known RBP	6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	PSAP	P07602	524 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	ZNF16	P17020	682 aa	Predicted RBP	6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	NRL	P54845	237 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	PLAUR	Q03405	335 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	KIF22	Q14807	665 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	ERMP1	Q7Z2K6	904 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	KRT25	Q7Z3Z0	450 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	SYT9	Q86SS6	491 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	C1orf127	Q8N9H9	656 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	ZBED3	Q96IU2	234 aa	Predicted RBP	6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	CNTNAP3B	Q96NU0	1288 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	TESK2	Q96S53	571 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	MXD3	Q9BW11	206 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	TEX13A	Q9BXU3	409 aa	Predicted RBP	6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	CNTNAP3	Q9BZ76	1288 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	NYX	Q9GZU5	481 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	CNTN3	Q9P232	1028 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	GBF1	Q92538	1859 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	NBEA	Q8NFP9	2946 aa		6.6	□□□□□ -1.35
PABPC1-223	ENST00000523636	CEMIP	Q8WUJ3	1361 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	AOX1	Q06278	1338 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	PHF20L1	A8MW92	1017 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	KIF4A	O95239	1232 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	CENPB	P07199	599 aa	Predicted RBP	6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	CAPN2	P17655	700 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	CES1	P23141	567 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	ADH6	P28332	368 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	GPSM2	P81274	684 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	SRSF11	Q05519	484 aa	Known RBP	6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	DHX32	Q7L7V1	743 aa	Known RBP	6.59	□□□□□ -1.35

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