RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 ZMYM6O95789 1325 aa17.9■□□□□ 0.46
CSMD1-207ENST00000520451 MROH7Q68CQ1 1323 aa17.9■□□□□ 0.46
CSMD1-207ENST00000520451 CCDC171Q6TFL3 1326 aa17.9■□□□□ 0.46
CSMD1-207ENST00000520451 A0A0U1RQG5 324 aaPredicted RBP17.89■□□□□ 0.45
CSMD1-207ENST00000520451 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.89■□□□□ 0.45
CSMD1-207ENST00000520451 ICAM1P05362 532 aa17.89■□□□□ 0.45
CSMD1-207ENST00000520451 TOP1P11387 765 aaKnown RBP17.89■□□□□ 0.45
CSMD1-207ENST00000520451 SLC16A2P36021 539 aa17.89■□□□□ 0.45
CSMD1-207ENST00000520451 TNFAIP2Q03169 654 aa17.89■□□□□ 0.45
CSMD1-207ENST00000520451 AAMPQ13685 434 aa17.89■□□□□ 0.45
CSMD1-207ENST00000520451 NSMFQ6X4W1 530 aa17.89■□□□□ 0.45
CSMD1-207ENST00000520451 RNPC3Q96LT9 517 aaKnown RBP17.89■□□□□ 0.45
CSMD1-207ENST00000520451 RANBP17Q9H2T7 1088 aaKnown RBP17.89■□□□□ 0.45
CSMD1-207ENST00000520451 RWDD1Q9H446 243 aaPredicted RBP17.89■□□□□ 0.45
CSMD1-207ENST00000520451 TCP11L1Q9NUJ3 509 aa17.89■□□□□ 0.45
CSMD1-207ENST00000520451 CYP39A1Q9NYL5 469 aa17.89■□□□□ 0.45
CSMD1-207ENST00000520451 DDX49Q9Y6V7 483 aaKnown RBP17.89■□□□□ 0.45
CSMD1-207ENST00000520451 FRMPD2Q68DX3 1309 aaPredicted RBP17.89■□□□□ 0.45
CSMD1-207ENST00000520451 DLL1O00548 723 aa17.88■□□□□ 0.45
CSMD1-207ENST00000520451 CTAGE5O15320 804 aa17.88■□□□□ 0.45
CSMD1-207ENST00000520451 SMAD3P84022 425 aaKnown RBP17.88■□□□□ 0.45
CSMD1-207ENST00000520451 BEX3Q00994 111 aa17.88■□□□□ 0.45
CSMD1-207ENST00000520451 SYDE2Q5VT97 1194 aa17.88■□□□□ 0.45
CSMD1-207ENST00000520451 BTNL9Q6UXG8 535 aa17.88■□□□□ 0.45
CSMD1-207ENST00000520451 SMC5Q8IY18 1101 aa17.88■□□□□ 0.45
CSMD1-207ENST00000520451 GPCPD1Q9NPB8 672 aa17.88■□□□□ 0.45
CSMD1-207ENST00000520451 TBX21Q9UL17 535 aa17.88■□□□□ 0.45
CSMD1-207ENST00000520451 ASTN1O14525 1302 aa17.88■□□□□ 0.45
CSMD1-207ENST00000520451 ARVCFO00192 962 aa17.87■□□□□ 0.45
CSMD1-207ENST00000520451 TIMP1P01033 207 aa17.87■□□□□ 0.45
CSMD1-207ENST00000520451 CDK7P50613 346 aa17.87■□□□□ 0.45
CSMD1-207ENST00000520451 AKNAD1Q5T1N1 836 aa17.87■□□□□ 0.45
CSMD1-207ENST00000520451 MFSD6Q6ZSS7 791 aa17.87■□□□□ 0.45
CSMD1-207ENST00000520451 TLK2Q86UE8 772 aa17.87■□□□□ 0.45
CSMD1-207ENST00000520451 TBC1D10CQ8IV04 446 aa17.87■□□□□ 0.45
CSMD1-207ENST00000520451 FBXO16Q8IX29 292 aaPredicted RBP17.87■□□□□ 0.45
CSMD1-207ENST00000520451 PCP11498 1178 aaKnown RBP17.86■□□□□ 0.45
CSMD1-207ENST00000520451 SDSP20132 328 aa17.86■□□□□ 0.45
CSMD1-207ENST00000520451 MFAP1P55081 439 aaKnown RBP17.86■□□□□ 0.45
CSMD1-207ENST00000520451 NKX3-2P78367 333 aa17.86■□□□□ 0.45
CSMD1-207ENST00000520451 EEPD1Q7L9B9 569 aa17.86■□□□□ 0.45
CSMD1-207ENST00000520451 CHD1LQ86WJ1 897 aa17.86■□□□□ 0.45
CSMD1-207ENST00000520451 PURBQ96QR8 312 aaKnown RBP17.86■□□□□ 0.45
CSMD1-207ENST00000520451 AP5M1Q9H0R1 490 aa17.86■□□□□ 0.45
CSMD1-207ENST00000520451 PDGFCQ9NRA1 345 aa17.86■□□□□ 0.45
CSMD1-207ENST00000520451 GNEQ9Y223 722 aaKnown RBP17.86■□□□□ 0.45
CSMD1-207ENST00000520451 UNC80Q8N2C7 3258 aa17.86■□□□□ 0.45
CSMD1-207ENST00000520451 LRRC37A2A6NM11 1700 aa17.85■□□□□ 0.45
CSMD1-207ENST00000520451 TLR3O15455 904 aaKnown RBP17.85■□□□□ 0.45
CSMD1-207ENST00000520451 PDHBP11177 359 aa17.85■□□□□ 0.45
CSMD1-207ENST00000520451 SMPD1P17405 629 aa17.85■□□□□ 0.45
CSMD1-207ENST00000520451 PTGS1P23219 599 aa17.85■□□□□ 0.45
CSMD1-207ENST00000520451 BAATQ14032 418 aaPredicted RBP17.85■□□□□ 0.45
CSMD1-207ENST00000520451 FSCN1Q16658 493 aaKnown RBP17.85■□□□□ 0.45
CSMD1-207ENST00000520451 CXCL17Q6UXB2 119 aa17.85■□□□□ 0.45
CSMD1-207ENST00000520451 PLEKHM2Q8IWE5 1019 aa17.85■□□□□ 0.45
CSMD1-207ENST00000520451 SEMA6BQ9H3T3 888 aa17.85■□□□□ 0.45
CSMD1-207ENST00000520451 RNF41Q9H4P4 317 aaPredicted RBP17.85■□□□□ 0.45
CSMD1-207ENST00000520451 PTPDC1A2A3K4 754 aa17.84■□□□□ 0.45
CSMD1-207ENST00000520451 NFIBO00712 420 aa17.84■□□□□ 0.45
CSMD1-207ENST00000520451 DYNC1LI2O43237 492 aaPredicted RBP17.84■□□□□ 0.45
CSMD1-207ENST00000520451 IGHDP01880 384 aa17.84■□□□□ 0.45
CSMD1-207ENST00000520451 NUCB1Q02818 461 aa17.84■□□□□ 0.45
CSMD1-207ENST00000520451 IQSEC1Q6DN90 963 aa17.84■□□□□ 0.45
CSMD1-207ENST00000520451 MFSD5Q6N075 450 aa17.84■□□□□ 0.45
CSMD1-207ENST00000520451 TAPT1Q6NXT6 567 aa17.84■□□□□ 0.45
CSMD1-207ENST00000520451 FAM126BQ8IXS8 530 aa17.84■□□□□ 0.45
CSMD1-207ENST00000520451 ESR2Q92731 530 aa17.84■□□□□ 0.45
CSMD1-207ENST00000520451 TTC14Q96N46 770 aa17.84■□□□□ 0.45
CSMD1-207ENST00000520451 CDX2Q99626 313 aaPredicted RBP17.84■□□□□ 0.45
CSMD1-207ENST00000520451 VTA1Q9NP79 307 aa17.84■□□□□ 0.45
CSMD1-207ENST00000520451 ADD3Q9UEY8 706 aaKnown RBP17.84■□□□□ 0.45
CSMD1-207ENST00000520451 CDH23Q9H251 3354 aa17.83■□□□□ 0.45
CSMD1-207ENST00000520451 NEDD4P46934 1319 aa17.83■□□□□ 0.44
CSMD1-207ENST00000520451 ZEB2O60315 1214 aa17.83■□□□□ 0.44
CSMD1-207ENST00000520451 CABYRO75952 493 aa17.83■□□□□ 0.44
CSMD1-207ENST00000520451 ALDH5A1P51649 535 aaPredicted RBP17.83■□□□□ 0.44
CSMD1-207ENST00000520451 ZNF543Q08ER8 600 aa17.83■□□□□ 0.44
CSMD1-207ENST00000520451 PPIGQ13427 754 aaKnown RBP eCLIP17.83■□□□□ 0.44
CSMD1-207ENST00000520451 KIAA1211Q6ZU35 1233 aa17.83■□□□□ 0.44
CSMD1-207ENST00000520451 MORC4Q8TE76 937 aa17.83■□□□□ 0.44
CSMD1-207ENST00000520451 PPP1R12CQ9BZL4 782 aa17.83■□□□□ 0.44
CSMD1-207ENST00000520451 TTYH1Q9H313 450 aaPredicted RBP17.83■□□□□ 0.44
CSMD1-207ENST00000520451 OSBPL3Q9H4L5 887 aa17.83■□□□□ 0.44
CSMD1-207ENST00000520451 DIAPH3Q9NSV4 1193 aa17.83■□□□□ 0.44
CSMD1-207ENST00000520451 EYSQ5T1H1 3165 aa17.83■□□□□ 0.44
CSMD1-207ENST00000520451 LCTP09848 1927 aa17.82■□□□□ 0.44
CSMD1-207ENST00000520451 ZNF213O14771 459 aa17.82■□□□□ 0.44
CSMD1-207ENST00000520451 TMEM63BQ5T3F8 832 aa17.82■□□□□ 0.44
CSMD1-207ENST00000520451 CWC27Q6UX04 472 aaKnown RBP17.82■□□□□ 0.44
CSMD1-207ENST00000520451 SLC30A10Q6XR72 485 aa17.82■□□□□ 0.44
CSMD1-207ENST00000520451 TMEM199Q8N511 208 aa17.82■□□□□ 0.44
CSMD1-207ENST00000520451 EXOC6Q8TAG9 804 aa17.82■□□□□ 0.44
CSMD1-207ENST00000520451 CLEC4DQ8WXI8 215 aa17.82■□□□□ 0.44
CSMD1-207ENST00000520451 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.82■□□□□ 0.44
CSMD1-207ENST00000520451 ZKSCAN3Q9BRR0 538 aa17.82■□□□□ 0.44
CSMD1-207ENST00000520451 PNMA2Q9UL42 364 aa17.82■□□□□ 0.44
CSMD1-207ENST00000520451 Q9Y3F1 56 aa17.82■□□□□ 0.44
CSMD1-207ENST00000520451 CD4P01730 458 aa17.81■□□□□ 0.44
CSMD1-207ENST00000520451 SNHG28P0DPA3 235 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms