RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 VAT1LQ9HCJ6 419 aa13.21□□□□□ -0.29
ARFGEF1-202ENST00000517955 BARHL2Q9NY43 387 aa13.21□□□□□ -0.29
ARFGEF1-202ENST00000517955 DAXXQ9UER7 740 aaPredicted RBP13.21□□□□□ -0.29
ARFGEF1-202ENST00000517955 SEC63Q9UGP8 760 aaKnown RBP13.21□□□□□ -0.29
ARFGEF1-202ENST00000517955 THSD7BQ9C0I4 1608 aa13.21□□□□□ -0.3
ARFGEF1-202ENST00000517955 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 IGF2BP3O00425 579 aaKnown RBP eCLIP13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 PPP1R18Q6NYC8 613 aa13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 FAM184AQ8NB25 1140 aa13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 ATG4CQ96DT6 458 aa13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 PARK7Q99497 189 aaKnown RBP13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 AMNQ9BXJ7 453 aa13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 CFHR5Q9BXR6 569 aa13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 ZNF214Q9UL59 606 aaPredicted RBP13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 ISY1Q9ULR0 285 aaKnown RBP13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 RABGAP1Q9Y3P9 1069 aa13.2□□□□□ -0.3
ARFGEF1-202ENST00000517955 ESYT2A0FGR8 921 aa13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 XBP1P17861 261 aa13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 TKFCQ3LXA3 575 aa13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 GALNT17Q6IS24 598 aa13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 FBXO11Q86XK2 927 aa13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 SAMD3Q8N6K7 520 aa13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 FBXO18Q8NFZ0 1043 aa13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 CCDC12Q8WUD4 166 aaPredicted RBP13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 DDX11Q96FC9 970 aa13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 ALG1Q9BT22 464 aa13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 MORF4L1Q9UBU8 362 aa13.19□□□□□ -0.3
ARFGEF1-202ENST00000517955 COL11A1P12107 1806 aaPredicted RBP13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 ADGRA2Q96PE1 1338 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 STXBP3O00186 592 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 COPB2P35606 906 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 SLC4A3P48751 1232 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 VEGFBP49765 207 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 GHRHRQ02643 423 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 TMEM132BQ14DG7 1078 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 LARP1BQ659C4 914 aaKnown RBP13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 WWC2Q6AWC2 1192 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 HOMER1Q86YM7 354 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 CCDC148Q8NFR7 591 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 ZIC5Q96T25 663 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 TEX13BQ9BXU2 312 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 ZMYND12Q9H0C1 365 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 GLT8D2Q9H1C3 349 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 RBPJLQ9UBG7 517 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 PCDHA1Q9Y5I3 950 aa13.18□□□□□ -0.3
ARFGEF1-202ENST00000517955 ABCB11O95342 1321 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 SMCHD1A6NHR9 2005 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 CEP350Q5VT06 3117 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 hCG_1642624A0A1W2PR95 340 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 CA12O43570 354 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 CNMDO75829 334 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 STAT3P40763 770 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 RIOX2Q8IUF8 465 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 EFCAB3Q8N7B9 438 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 DAGLBQ8NCG7 672 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 PHF20Q9BVI0 1012 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 MAP3K20Q9NYL2 800 aaKnown RBP13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 BTBD7Q9P203 1132 aa13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 MRPL11Q9Y3B7 192 aaKnown RBP13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 CTDP1Q9Y5B0 961 aaPredicted RBP13.17□□□□□ -0.3
ARFGEF1-202ENST00000517955 TLR2O60603 784 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 AOC2O75106 756 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 PPFIA3O75145 1194 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 SLC25A27O95847 323 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 CYP2C8P10632 490 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 BCRP11274 1271 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 SYT1P21579 422 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 CALML3P27482 149 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 GNA11P29992 359 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 FAM110CQ1W6H9 321 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 C17orf99Q6UX52 265 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 HEATR3Q7Z4Q2 680 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 SHCBP1Q8NEM2 672 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 CHST13Q8NET6 341 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 SMCR8Q8TEV9 937 aaPredicted RBP13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 SHISA4Q96DD7 197 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 AGBL1Q96MI9 1066 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 AIFM3Q96NN9 605 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 SPATC1LQ9H0A9 340 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 ZFYVE28Q9HCC9 887 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 RAVER2Q9HCJ3 691 aaKnown RBP13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 TXNRD2Q9NNW7 524 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 CCPG1Q9ULG6 757 aa13.16□□□□□ -0.3
ARFGEF1-202ENST00000517955 PIK3CDO00329 1044 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 STX6O43752 255 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 MMP1P03956 469 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 SNAP25P60880 206 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 ERVK-9P63128 1117 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 ERVK-24P63145 666 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 TRIM29Q14134 588 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 TAF1CQ15572 869 aaPredicted RBP13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 NPY5RQ15761 445 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 KRT40Q6A162 431 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms