RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 MAP2K1Q02750 393 aaPredicted RBP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 PTPN12Q05209 780 aaKnown RBP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 SEMA3FQ13275 785 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 KRT31Q15323 416 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 GRIPAP1Q4V328 841 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 AMOTQ4VCS5 1084 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 TMEM259Q4ZIN3 620 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 LACTB2Q53H82 288 aaPredicted RBP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 TTMPQ5BVD1 217 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 CCDC122Q5T0U0 273 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 DNAJC14Q6Y2X3 702 aaPredicted RBP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 CCDC121Q6ZUS5 278 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 ARMC9Q7Z3E5 817 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 KIAA1328Q86T90 577 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 NLRP14Q86W24 1093 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 NOSTRINQ8IVI9 506 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 CCDC13Q8IYE1 715 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 CCDC170Q8IYT3 715 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 PROCA1Q8NCQ7 364 aaPredicted RBP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 HOOK2Q96ED9 719 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 SGSM3Q96HU1 749 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 TMEM87BQ96K49 555 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 CCDC114Q96M63 670 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 NUP88Q99567 741 aaPredicted RBP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 METTL22Q9BUU2 404 aaPredicted RBP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 FOXP1Q9H334 677 aaPredicted RBP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 ESF1Q9H501 851 aaKnown RBP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 AATFQ9NY61 560 aaKnown RBP eCLIP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 RWDD2AQ9UIY3 292 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 GUCA1BQ9UMX6 200 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 REXO2Q9Y3B8 237 aaKnown RBP7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 SAMM50Q9Y512 469 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 PCDHB3Q9Y5E6 796 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 DISP2A7MBM2 1401 aa7.1□□□□□ -1.27
CALCOCO2-224ENST00000514962 COL22A1Q8NFW1 1626 aaPredicted RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 M0R2C6 588 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 N4BP3O15049 544 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 RNMTO43148 476 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 PPFIA3O75145 1194 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 DNAJC8O75937 253 aaPredicted RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 IPO7O95373 1038 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 RAPGEF3O95398 923 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 FMNL1O95466 1100 aaPredicted RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 TFRCP02786 760 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 ANXA1P04083 346 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 CFHP08603 1231 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 SLC10A3P09131 477 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 MYBL2P10244 700 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 TCP1P17987 556 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 MDH1P40925 334 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 IARSP41252 1262 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 MARSP56192 900 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 HERVK_113P62684 666 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 SARNPP82979 210 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 SSRP1Q08945 709 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 DPYDQ12882 1025 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 PDCLQ13371 301 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 TTF1Q15361 905 aaPredicted RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 MEA1Q16626 185 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 HSP90AA4PQ58FG1 418 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 TJAP1Q5JTD0 557 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 CFAP58Q5T655 872 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 RNF187Q5TA31 235 aaPredicted RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 LRIG3Q6UXM1 1119 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 RIC3Q7Z5B4 369 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 APBB1IPQ7Z5R6 666 aaPredicted RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 IFT20Q8IY31 132 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 EIF1ADQ8N9N8 165 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 MYCBPAPQ8TBZ2 947 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 CCHCR1Q8TD31 782 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 NOC3LQ8WTT2 800 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 ARL8AQ96BM9 186 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 NUP58Q9BVL2 599 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 EHD4Q9H223 541 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 HOMER3Q9NSC5 361 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 ZNHIT6Q9NWK9 470 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 RNF14Q9UBS8 474 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 CAPN11Q9UMQ6 739 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 ANGEL1Q9UNK9 670 aaKnown RBP7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 LTN1O94822 1766 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 MYH8P13535 1937 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 CAMTA1Q9Y6Y1 1673 aa7.09□□□□□ -1.27
CALCOCO2-224ENST00000514962 ADAMTS13Q76LX8 1427 aa7.09□□□□□ -1.28
CALCOCO2-224ENST00000514962 LAMB4A4D0S4 1761 aa7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 ANKRD33BA6NCL7 494 aa7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 KCNJ18B7U540 433 aa7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 PDE2AO00408 941 aaPredicted RBP7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 PES1O00541 588 aaKnown RBP7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 KCNQ3O43525 872 aa7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 PEX14O75381 377 aa7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 TACC1O75410 805 aa7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 NEBLO76041 1014 aa7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 MMP1P03956 469 aa7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 IFIT1P09914 478 aaKnown RBP7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 NR1D1P20393 614 aa7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 EEF1GP26641 437 aaKnown RBP7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 IL15P40933 162 aaPredicted RBP7.08□□□□□ -1.28
CALCOCO2-224ENST00000514962 COPS2P61201 443 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms