RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 KCNT2Q6UVM3 1135 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 BRAPQ7Z569 592 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 CREG2Q8IUH2 290 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 ANKRD13AQ8IZ07 590 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 LINC00116Q8NCU8 138 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 NPLOC4Q8TAT6 608 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 FRS2Q8WU20 508 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 TRIM39Q9HCM9 518 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 TRAF6Q9Y4K3 522 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 PCDHA11Q9Y5I1 949 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 PITPNM2Q9BZ72 1349 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 ASXL2Q76L83 1435 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 ARNTLO00327 626 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 TGFB1P01137 390 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 SEPHS1P49903 392 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 TRIM61Q5EBN2 209 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 ZPBP2Q6X784 338 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 FGD2Q7Z6J4 655 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 PPIL6Q8IXY8 311 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 PTPRN2Q92932 1015 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 PCDH12Q9NPG4 1184 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 AP5S1Q9NUS5 200 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 CLEC1BQ9P126 229 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 TMEFF2Q9UIK5 374 aaPredicted RBP6.19□□□□□ -1.42
NIPBL-207ENST00000513819 RNF112Q9ULX5 631 aa6.19□□□□□ -1.42
NIPBL-207ENST00000513819 hCG_2014768A0A024R1R8 64 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 A0A087X0B3 334 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 DNAJC8O75937 253 aaPredicted RBP6.18□□□□□ -1.42
NIPBL-207ENST00000513819 ESR1P03372 595 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 PLS3P13797 630 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 IBSPP21815 317 aaPredicted RBP6.18□□□□□ -1.42
NIPBL-207ENST00000513819 EGR3Q06889 387 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 AOC3Q16853 763 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 RCSD1Q6JBY9 416 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 CNNM4Q6P4Q7 775 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 RNF111Q6ZNA4 994 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 THNSL2Q86YJ6 484 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 KSR1Q8IVT5 923 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 GSTCDQ8NEC7 633 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 ZCRB1Q8TBF4 217 aaKnown RBP6.18□□□□□ -1.42
NIPBL-207ENST00000513819 SCLYQ96I15 445 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 HRASLS5Q96KN8 279 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 CDADC1Q9BWV3 514 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 SNX11Q9Y5W9 270 aa6.18□□□□□ -1.42
NIPBL-207ENST00000513819 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.17□□□□□ -1.42
NIPBL-207ENST00000513819 MEFVO15553 781 aaPredicted RBP6.17□□□□□ -1.42
NIPBL-207ENST00000513819 KCNQ2O43526 872 aa6.17□□□□□ -1.42
NIPBL-207ENST00000513819 PDE8AO60658 829 aa6.17□□□□□ -1.42
NIPBL-207ENST00000513819 EFCAB14O75071 495 aa6.17□□□□□ -1.42
NIPBL-207ENST00000513819 HMGB1P09429 215 aaKnown RBP6.17□□□□□ -1.42
NIPBL-207ENST00000513819 RPL10P27635 214 aaKnown RBP6.17□□□□□ -1.42
NIPBL-207ENST00000513819 CD96P40200 585 aa6.17□□□□□ -1.42
NIPBL-207ENST00000513819 AMPD3Q01432 767 aa6.17□□□□□ -1.42
NIPBL-207ENST00000513819 TMPRSS7Q7RTY8 843 aa6.17□□□□□ -1.42
NIPBL-207ENST00000513819 CCDC103Q8IW40 242 aa6.17□□□□□ -1.42
NIPBL-207ENST00000513819 UBR7Q8N806 425 aa6.17□□□□□ -1.42
NIPBL-207ENST00000513819 DCAF4Q8WV16 495 aa6.17□□□□□ -1.42
NIPBL-207ENST00000513819 PHF20Q9BVI0 1012 aa6.17□□□□□ -1.42
NIPBL-207ENST00000513819 TARS2Q9BW92 718 aaKnown RBP6.17□□□□□ -1.42
NIPBL-207ENST00000513819 NOP58Q9Y2X3 529 aaKnown RBP6.17□□□□□ -1.42
NIPBL-207ENST00000513819 PCDHA9Q9Y5H5 950 aa6.17□□□□□ -1.42
NIPBL-207ENST00000513819 TMEM82A0PJX8 343 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 FGF10O15520 208 aaPredicted RBP6.16□□□□□ -1.42
NIPBL-207ENST00000513819 RASGRP1O95267 797 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 VIL1P09327 827 aaKnown RBP6.16□□□□□ -1.42
NIPBL-207ENST00000513819 FURINP09958 794 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 LCP1P13796 627 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 CNGA1P29973 690 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 IGBP1P78318 339 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 TEKQ02763 1124 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 BNIP3Q12983 259 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 ZNF460Q14592 562 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 PRSS36Q5K4E3 855 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 ACBD5Q5T8D3 534 aaPredicted RBP6.16□□□□□ -1.42
NIPBL-207ENST00000513819 EEF1DP3Q658K8 133 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 STYK1Q6J9G0 422 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 MAMDC2Q7Z304 686 aaPredicted RBP6.16□□□□□ -1.42
NIPBL-207ENST00000513819 WAPLQ7Z5K2 1190 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 SLC51AQ86UW1 340 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 LRRTM3Q86VH5 581 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 CPNE8Q86YQ8 564 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 PTCHD1Q96NR3 888 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 FAM126AQ9BYI3 521 aaPredicted RBP6.16□□□□□ -1.42
NIPBL-207ENST00000513819 BRINP2Q9C0B6 783 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 TMX1Q9H3N1 280 aa6.16□□□□□ -1.42
NIPBL-207ENST00000513819 MAGEC2Q9UBF1 373 aaPredicted RBP6.16□□□□□ -1.42
NIPBL-207ENST00000513819 TNPO3Q9Y5L0 923 aaKnown RBP6.16□□□□□ -1.42
NIPBL-207ENST00000513819 GSG1L2A8MUP6 293 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 OPA1O60313 960 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 MSCO60682 206 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 CRTAMO95727 393 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 PAMP19021 973 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 LTBRP36941 435 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 ANAPC15P60006 121 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 MSMPQ1L6U9 139 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 INF2Q27J81 1249 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 MBLAC2Q68D91 279 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 KRT26Q7Z3Y9 468 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 NAT16Q8N8M0 369 aa6.15□□□□□ -1.42
NIPBL-207ENST00000513819 CHAC2Q8WUX2 184 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms