RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 FOSL1P15407 271 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 LTKP29376 864 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 IGBP1P78318 339 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 GABREP78334 506 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 CPSF6Q16630 551 aaKnown RBP eCLIP4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 GAB4Q2WGN9 574 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 CNNM4Q6P4Q7 775 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 KCNT2Q6UVM3 1135 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 BRAPQ7Z569 592 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 THAP5Q7Z6K1 395 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 CREG2Q8IUH2 290 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 LINC00116Q8NCU8 138 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 KREMEN2Q8NCW0 462 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 FRS2Q8WU20 508 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 COPS5Q92905 334 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 PTPRN2Q92932 1015 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 C1orf159Q96HA4 380 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 TMX1Q9H3N1 280 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 ATP13A1Q9HD20 1204 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 PCDH12Q9NPG4 1184 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 CLEC1BQ9P126 229 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 PCDHA11Q9Y5I1 949 aa4.43□□□□□ -1.7
CALCOCO2-216ENST00000509784 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 MEFVO15553 781 aaPredicted RBP4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 PDE8AO60658 829 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 EFCAB14O75071 495 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 DNAJC8O75937 253 aaPredicted RBP4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 RPL10P27635 214 aaKnown RBP4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 CNGA1P29973 690 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 HOXA10P31260 410 aaPredicted RBP4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 ANAPC15P60006 121 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 EGR3Q06889 387 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 AOC3Q16853 763 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 TRIM61Q5EBN2 209 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 RTP2Q5QGT7 225 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 EEF1DP3Q658K8 133 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 RCSD1Q6JBY9 416 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 ZPBP2Q6X784 338 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 RNF111Q6ZNA4 994 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 ASXL2Q76L83 1435 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 TMPRSS7Q7RTY8 843 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 FGD2Q7Z6J4 655 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 KSR1Q8IVT5 923 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 UBR7Q8N806 425 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 NAT16Q8N8M0 369 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 NPLOC4Q8TAT6 608 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 DCAF4Q8WV16 495 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 MAGEB10Q96LZ2 347 aaPredicted RBP4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 PHF20Q9BVI0 1012 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 TRIM39Q9HCM9 518 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 AP5S1Q9NUS5 200 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 TMEFF2Q9UIK5 374 aaPredicted RBP4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 NOP58Q9Y2X3 529 aaKnown RBP4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 SNX11Q9Y5W9 270 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 PITPNM2Q9BZ72 1349 aa4.42□□□□□ -1.7
CALCOCO2-216ENST00000509784 A0A087X0B3 334 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 NPHP3-ACAD11A0A0J9YXS1 232 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 ARNTLO00327 626 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 KCNQ2O43526 872 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 OPA1O60313 960 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 TGFB1P01137 390 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 ESR1P03372 595 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 VIL1P09327 827 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 PAMP19021 973 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 AMPD3Q01432 767 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 CT47A1Q5JQC4 288 aaPredicted RBP4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 MAMDC2Q7Z304 686 aaPredicted RBP4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 WAPLQ7Z5K2 1190 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 SLC51AQ86UW1 340 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 LRRTM3Q86VH5 581 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 THNSL2Q86YJ6 484 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 CCDC103Q8IW40 242 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 GSTCDQ8NEC7 633 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 CHAC2Q8WUX2 184 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 SCLYQ96I15 445 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 HRASLS5Q96KN8 279 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 PTCHD1Q96NR3 888 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 TARS2Q9BW92 718 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 BRINP2Q9C0B6 783 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 MAGEC2Q9UBF1 373 aaPredicted RBP4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 PCDHA9Q9Y5H5 950 aa4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 TNPO3Q9Y5L0 923 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-216ENST00000509784 TMEM82A0PJX8 343 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 FGF10O15520 208 aaPredicted RBP4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 RASGRP1O95267 797 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 CRTAMO95727 393 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 FURINP09958 794 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 LCP1P13796 627 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 LTBRP36941 435 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 CD96P40200 585 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 GUCY1A3Q02108 690 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 PRKCQQ04759 706 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 IKZF1Q13422 519 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 LAPTM5Q13571 262 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 ZNF460Q14592 562 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 ACBD5Q5T8D3 534 aaPredicted RBP4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 STYK1Q6J9G0 422 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 KRT26Q7Z3Y9 468 aa4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 MTDHQ86UE4 582 aaKnown RBP4.4□□□□□ -1.71
CALCOCO2-216ENST00000509784 CPNE8Q86YQ8 564 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms