RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 IQCKQ8N0W5 287 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 LRRC1Q9BTT6 524 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 TTYH3Q9C0H2 523 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 EHD4Q9H223 541 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 NHEJ1Q9H9Q4 299 aaPredicted RBP17.68■□□□□ 0.42
SCLT1-208ENST00000506368 ODF2LQ9ULJ1 636 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 PPP1R12AO14974 1030 aaPredicted RBP17.68■□□□□ 0.42
SCLT1-208ENST00000506368 EZRP15311 586 aaKnown RBP17.68■□□□□ 0.42
SCLT1-208ENST00000506368 NR1D1P20393 614 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 KCNB1Q14721 858 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 C6orf89Q6UWU4 347 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 NLRP14Q86W24 1093 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 FAM114A1Q8IWE2 563 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 SMYD4Q8IYR2 804 aaPredicted RBP17.68■□□□□ 0.42
SCLT1-208ENST00000506368 WHAMMQ8TF30 809 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 ZIM3Q96PE6 472 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 A0A1B0GUA9 196 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 GUCY1A2P33402 732 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 MDH1P40925 334 aaKnown RBP17.67■□□□□ 0.42
SCLT1-208ENST00000506368 ATP2C1P98194 919 aaPredicted RBP17.67■□□□□ 0.42
SCLT1-208ENST00000506368 WTAPQ15007 396 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 AKNAD1Q5T1N1 836 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 C8orf74Q6P047 294 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 PDXDC2PQ6P474 469 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 IQCA1Q86XH1 822 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 ARL8AQ96BM9 186 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 SENP2Q9HC62 589 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 ZSWIM5Q9P217 1185 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 DMGDHQ9UI17 866 aaKnown RBP17.67■□□□□ 0.42
SCLT1-208ENST00000506368 RTL9Q8NET4 1388 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 PATL2C9JE40 543 aaKnown RBP17.67■□□□□ 0.42
SCLT1-208ENST00000506368 APBA3O96018 575 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 HNRNPH3P31942 346 aaKnown RBP17.67■□□□□ 0.42
SCLT1-208ENST00000506368 NBPF9Q3BBW0 867 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 CCDC13Q8IYE1 715 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 TEX11Q8IYF3 940 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 ADSSL1Q8N142 457 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 MYCBPAPQ8TBZ2 947 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 RRP36Q96EU6 259 aaKnown RBP17.67■□□□□ 0.42
SCLT1-208ENST00000506368 CCT8L2Q96SF2 557 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 GDF3Q9NR23 364 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 EXOC1Q9NV70 894 aa17.67■□□□□ 0.42
SCLT1-208ENST00000506368 ZNF185O15231 689 aa17.66■□□□□ 0.42
SCLT1-208ENST00000506368 LCA5LO95447 670 aa17.66■□□□□ 0.42
SCLT1-208ENST00000506368 RPN1P04843 607 aaKnown RBP17.66■□□□□ 0.42
SCLT1-208ENST00000506368 HAUS3Q68CZ6 603 aa17.66■□□□□ 0.42
SCLT1-208ENST00000506368 LRIG3Q6UXM1 1119 aa17.66■□□□□ 0.42
SCLT1-208ENST00000506368 CCDC121Q6ZUS5 278 aa17.66■□□□□ 0.42
SCLT1-208ENST00000506368 DEFB132Q7Z7B7 95 aa17.66■□□□□ 0.42
SCLT1-208ENST00000506368 ATP6V1G3Q96LB4 118 aa17.66■□□□□ 0.42
SCLT1-208ENST00000506368 OSBPL9Q96SU4 736 aa17.66■□□□□ 0.42
SCLT1-208ENST00000506368 LACRTQ9GZZ8 138 aa17.66■□□□□ 0.42
SCLT1-208ENST00000506368 SH2D4AQ9H788 454 aa17.66■□□□□ 0.42
SCLT1-208ENST00000506368 AKAP11Q9UKA4 1901 aa17.66■□□□□ 0.42
SCLT1-208ENST00000506368 TRIM21P19474 475 aaKnown RBP17.65■□□□□ 0.42
SCLT1-208ENST00000506368 ADORA1P30542 326 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 MFSD6Q6ZSS7 791 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 FANCBQ8NB91 859 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 TSEN2Q8NCE0 465 aaKnown RBP17.65■□□□□ 0.42
SCLT1-208ENST00000506368 RNPC3Q96LT9 517 aaKnown RBP17.65■□□□□ 0.42
SCLT1-208ENST00000506368 MYL10Q9BUA6 226 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 PHF20Q9BVI0 1012 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 PLA2G12BQ9BX93 195 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 RNF41Q9H4P4 317 aaPredicted RBP17.65■□□□□ 0.42
SCLT1-208ENST00000506368 MYH6P13533 1939 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 PSMA7O14818 248 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 GNAT2P19087 354 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 ARL6IP4Q66PJ3 421 aaKnown RBP17.65■□□□□ 0.42
SCLT1-208ENST00000506368 IRF2BP1Q8IU81 584 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 N4BP2L2Q92802 583 aaPredicted RBP17.65■□□□□ 0.42
SCLT1-208ENST00000506368 UPF1Q92900 1129 aaKnown RBP eCLIP17.65■□□□□ 0.42
SCLT1-208ENST00000506368 ZNF594Q96JF6 807 aaPredicted RBP17.65■□□□□ 0.42
SCLT1-208ENST00000506368 CCDC42Q96M95 316 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 STRBPQ96SI9 672 aaKnown RBP17.65■□□□□ 0.42
SCLT1-208ENST00000506368 NAPBQ9H115 298 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 SLC40A1Q9NP59 571 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
SCLT1-208ENST00000506368 GOLGA6L10A6NI86 522 aa17.64■□□□□ 0.41
SCLT1-208ENST00000506368 SCARF1Q14162 830 aa17.64■□□□□ 0.41
SCLT1-208ENST00000506368 CFAP221Q4G0U5 840 aa17.64■□□□□ 0.41
SCLT1-208ENST00000506368 RNF187Q5TA31 235 aaPredicted RBP17.64■□□□□ 0.41
SCLT1-208ENST00000506368 RNF10Q8N5U6 811 aaKnown RBP17.64■□□□□ 0.41
SCLT1-208ENST00000506368 SGSM3Q96HU1 749 aa17.64■□□□□ 0.41
SCLT1-208ENST00000506368 DHTKD1Q96HY7 919 aaPredicted RBP17.64■□□□□ 0.41
SCLT1-208ENST00000506368 ATP6V0A4Q9HBG4 840 aa17.64■□□□□ 0.41
SCLT1-208ENST00000506368 RBM28Q9NW13 759 aaKnown RBP17.64■□□□□ 0.41
SCLT1-208ENST00000506368 DENND2AQ9ULE3 1009 aa17.64■□□□□ 0.41
SCLT1-208ENST00000506368 CCDC189A1A4V9 331 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 GRID2IPA4D2P6 1211 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 PJA2O43164 708 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 UQCRFS1P1P0C7P4 283 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 PRCPP42785 496 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 SLC8A3P57103 927 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 EN1Q05925 392 aaPredicted RBP17.63■□□□□ 0.41
SCLT1-208ENST00000506368 TTC38Q5R3I4 469 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.63■□□□□ 0.41
SCLT1-208ENST00000506368 PARP9Q8IXQ6 854 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 OXER1Q8TDS5 423 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 CCDC114Q96M63 670 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 ERGIC2Q96RQ1 377 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms