RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RHOVQ96L33 236 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 C8orf49Q96NF6 230 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 JMJD8Q96S16 334 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 RSRP1Q9BUV0 290 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 PRDM14Q9GZV8 571 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 MRS2Q9HD23 443 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 PDLIM7Q9NR12 457 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 NTMQ9P121 344 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 FAN1Q9Y2M0 1017 aa4.05□□□□□ -1.76
HMGB1P35-201ENST00000503360 A0A1B0GTL3 188 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 SORBS3O60504 671 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 FZD7O75084 574 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 SLPIP03973 132 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 RAG1P15918 1043 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 SARSP49591 514 aaKnown RBP4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 DAB2P98082 770 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 SNW1Q13573 536 aaKnown RBP4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 TBC1D10BQ4KMP7 808 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 TMC4Q7Z404 712 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 TSPAN17Q96FV3 270 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 CDK5RAP1Q96SZ6 601 aaKnown RBP4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 CDADC1Q9BWV3 514 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 SSBP3Q9BWW4 388 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 LRRC3Q9BY71 257 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 CNNM2Q9H8M5 875 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 PCDH18Q9HCL0 1135 aa4.04□□□□□ -1.76
HMGB1P35-201ENST00000503360 PF4P02776 101 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 CTSKP43235 329 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 KIAA2012Q0VF49 1180 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 MRPL58Q14197 206 aaKnown RBP4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 SLC9A5Q14940 896 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 ARSHQ5FYA8 562 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 RTP2Q5QGT7 225 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 MEI1Q5TIA1 1274 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 ADGRG2Q8IZP9 1017 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 Q8N1X5 172 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 DDX1Q92499 740 aaKnown RBP4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 LOXL4Q96JB6 756 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 TMEM74Q96NL1 305 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 BACH2Q9BYV9 841 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 SCAND2PQ9GZW5 306 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 ANTXR1Q9H6X2 564 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 VTI1BQ9UEU0 232 aa4.03□□□□□ -1.76
HMGB1P35-201ENST00000503360 A0A1W2PQ27 194 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 A0A1W2PQ64 194 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 A0A1W2PQC6 194 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 A0A1W2PQD8 194 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 CLEC3AO75596 197 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 ASGR2P07307 311 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 VAMP1P23763 118 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 ITGAEP38570 1179 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 SURF1Q15526 300 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 FAM196AQ6ZSG2 479 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 TTLL7Q6ZT98 887 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 LGI4Q8N135 537 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 LINC00482Q8N8I6 264 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 KCNQ5Q9NR82 932 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 AP5S1Q9NUS5 200 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 PCDHB12Q9Y5F1 795 aa4.02□□□□□ -1.77
HMGB1P35-201ENST00000503360 RECKO95980 971 aa4.01□□□□□ -1.77
HMGB1P35-201ENST00000503360 PRR5P85299 388 aa4.01□□□□□ -1.77
HMGB1P35-201ENST00000503360 FAM26FQ5R3K3 315 aa4.01□□□□□ -1.77
HMGB1P35-201ENST00000503360 JAMLQ86YT9 394 aa4.01□□□□□ -1.77
HMGB1P35-201ENST00000503360 RELL1Q8IUW5 271 aa4.01□□□□□ -1.77
HMGB1P35-201ENST00000503360 TMEM87AQ8NBN3 555 aa4.01□□□□□ -1.77
HMGB1P35-201ENST00000503360 CHST13Q8NET6 341 aa4.01□□□□□ -1.77
HMGB1P35-201ENST00000503360 ADAMTS17Q8TE56 1095 aa4.01□□□□□ -1.77
HMGB1P35-201ENST00000503360 KISS1RQ969F8 398 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P35-201ENST00000503360 EHMT1Q9H9B1 1298 aa4.01□□□□□ -1.77
HMGB1P35-201ENST00000503360 SPATA6Q9NWH7 488 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P35-201ENST00000503360 A0A1W2PQJ5 194 aa4□□□□□ -1.77
HMGB1P35-201ENST00000503360 F8W031 263 aaPredicted RBP4□□□□□ -1.77
HMGB1P35-201ENST00000503360 ZBTB7AO95365 584 aa4□□□□□ -1.77
HMGB1P35-201ENST00000503360 CTSHP09668 335 aa4□□□□□ -1.77
HMGB1P35-201ENST00000503360 CACNB2Q08289 660 aaPredicted RBP4□□□□□ -1.77
HMGB1P35-201ENST00000503360 AUHQ13825 339 aaKnown RBP4□□□□□ -1.77
HMGB1P35-201ENST00000503360 CDSNQ15517 529 aa4□□□□□ -1.77
HMGB1P35-201ENST00000503360 CWF19L2Q2TBE0 894 aaKnown RBP4□□□□□ -1.77
HMGB1P35-201ENST00000503360 LDLRAD1Q5T700 205 aa4□□□□□ -1.77
HMGB1P35-201ENST00000503360 BICRALQ6AI39 1079 aa4□□□□□ -1.77
HMGB1P35-201ENST00000503360 BORAQ6PGQ7 559 aa4□□□□□ -1.77
HMGB1P35-201ENST00000503360 FAM124AQ86V42 546 aa4□□□□□ -1.77
HMGB1P35-201ENST00000503360 PCED1AQ9H1Q7 454 aa4□□□□□ -1.77
HMGB1P35-201ENST00000503360 TNFRSF10CO14798 259 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 FGF10O15520 208 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 GLI4P10075 376 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 TCF3P15923 654 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 GARTP22102 1010 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 RPL13P26373 211 aaKnown RBP3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 NOP2P46087 812 aaKnown RBP3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 LRRFIP1Q32MZ4 808 aaKnown RBP3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 GLB1LQ6UWU2 654 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 NLRC3Q7RTR2 1065 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 NAT16Q8N8M0 369 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 NETO2Q8NC67 525 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 ALG3Q92685 438 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 SLC12A9Q9BXP2 914 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 SEMA4AQ9H3S1 761 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 GFOD1Q9NXC2 390 aa3.99□□□□□ -1.77
HMGB1P35-201ENST00000503360 MEIS3P2A8K0S8 358 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms