RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 LONRF2Q1L5Z9 754 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 BBS9Q3SYG4 887 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 FNDC3BQ53EP0 1204 aaKnown RBP5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 NUTM2GQ5VZR2 741 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 FDX2Q6P4F2 183 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 VHLLQ6RSH7 139 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 TREML4Q6UXN2 200 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 C8orf86Q6ZUL3 223 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 C12orf40Q86WS4 652 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 CNTD1Q8N815 330 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 KCT2Q8NC54 265 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 FAM13CQ8NE31 585 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 USP33Q8TEY7 942 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 KISS1RQ969F8 398 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 BTBD6Q96KE9 485 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 CAMKK2Q96RR4 588 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 ATXN3LQ9H3M9 355 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 ANTXR1Q9H6X2 564 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 CYP4F12Q9HCS2 524 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 ADAM30Q9UKF2 790 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 IPPQ9Y573 584 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 CORINQ9Y5Q5 1042 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 SIGLEC1Q9BZZ2 1709 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 MAGI2Q86UL8 1455 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 POGZQ7Z3K3 1410 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 CDC42BPBQ9Y5S2 1711 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 MBD5Q9P267 1494 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 MLH3Q9UHC1 1453 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 IQCA1LA6NCM1 817 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 PRRT4C9JH25 899 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 ZNF862O60290 1169 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 CDK8P49336 464 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 SARSP49591 514 aaKnown RBP5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 EXOSC6Q5RKV6 272 aaKnown RBP5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 RINLQ6ZS11 566 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 ACAD11Q709F0 780 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 ZNF354CQ86Y25 554 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 SUGP1Q8IWZ8 645 aaKnown RBP5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 CLASRPQ8N2M8 674 aaKnown RBP5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 TAB3Q8N5C8 712 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 CCDC89Q8N998 374 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 ZNF507Q8TCN5 953 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 PARD3BQ8TEW8 1205 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 DHRS1Q96LJ7 313 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 IPO9Q96P70 1041 aaKnown RBP5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 ELAC2Q9BQ52 826 aaKnown RBP5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 WDR18Q9BV38 432 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 RNF208Q9H0X6 261 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 LUC7LQ9NQ29 371 aaKnown RBP5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 LRRC4BQ9NT99 713 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 ZNF69Q9UC07 566 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 GTF2A1LQ9UNN4 478 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 VPS8Q8N3P4 1428 aa5.29□□□□□ -1.56
HMGB1P21-201ENST00000502313 ABCC1P33527 1531 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 ARHGEF40Q8TER5 1519 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 PRR36Q9H6K5 1346 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 DENND4BO75064 1496 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 PREX2Q70Z35 1606 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 KLRG2A4D1S0 409 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 PRSS47A8MTI9 375 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 GFRA2O00451 464 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 TCERG1O14776 1098 aaKnown RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 FANCGO15287 622 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 DDX3YO15523 660 aaKnown RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 RNGTTO60942 597 aaKnown RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 RNASEH2AO75792 299 aaKnown RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 NME1P15531 152 aaKnown RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 GBP1P32455 592 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 ID4P47928 161 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 ERVK-24P63145 666 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 TMPRSS15P98073 1019 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 CHAF1AQ13111 956 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 GRM3Q14832 879 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 SLC10A6Q3KNW5 377 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 GNPTABQ3T906 1256 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 PPM1JQ5JR12 505 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 YOD1Q5VVQ6 348 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 CXorf57Q6NSI4 855 aaKnown RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 PKN3Q6P5Z2 889 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 CYFIP1Q7L576 1253 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 HID1Q8IV36 788 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 DRC7Q8IY82 874 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 UBASH3BQ8TF42 649 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 TRMT2BQ96GJ1 504 aaKnown RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 HERPUD2Q9BSE4 406 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 DHRS4Q9BTZ2 278 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 SELENOOQ9BVL4 669 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 NRSN2Q9GZP1 204 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 WNT10AQ9GZT5 417 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 PUS7LQ9H0K6 701 aaKnown RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 PLCB1Q9NQ66 1216 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 PRDM11Q9NQV5 511 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 DDX20Q9UHI6 824 aaKnown RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 ZBTB21Q9ULJ3 1066 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 PCDHB10Q9UN67 800 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 HIF3AQ9Y2N7 669 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 LUC7L2Q9Y383 392 aaKnown RBP5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 YEATS2Q9ULM3 1422 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 KIAA1107Q9UPP5 1409 aa5.28□□□□□ -1.56
HMGB1P21-201ENST00000502313 REREQ9P2R6 1566 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms