RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 PPP4R3AQ6IN85 833 aa16.5■□□□□ 0.23
PARP1-209ENST00000498787 MOXD1Q6UVY6 613 aa16.5■□□□□ 0.23
PARP1-209ENST00000498787 CDAN1Q8IWY9 1227 aa16.5■□□□□ 0.23
PARP1-209ENST00000498787 CEP57L1Q8IYX8 460 aa16.5■□□□□ 0.23
PARP1-209ENST00000498787 SPICE1Q8N0Z3 855 aa16.5■□□□□ 0.23
PARP1-209ENST00000498787 SAMD3Q8N6K7 520 aa16.5■□□□□ 0.23
PARP1-209ENST00000498787 IQUBQ8NA54 791 aa16.5■□□□□ 0.23
PARP1-209ENST00000498787 L3MBTL3Q96JM7 780 aaPredicted RBP16.5■□□□□ 0.23
PARP1-209ENST00000498787 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
PARP1-209ENST00000498787 RANBP17Q9H2T7 1088 aaKnown RBP16.5■□□□□ 0.23
PARP1-209ENST00000498787 ABCB11O95342 1321 aa16.49■□□□□ 0.23
PARP1-209ENST00000498787 PPP1R11O60927 126 aaPredicted RBP16.49■□□□□ 0.23
PARP1-209ENST00000498787 SMC2O95347 1197 aa16.49■□□□□ 0.23
PARP1-209ENST00000498787 OR52Z1P0C646 297 aa16.49■□□□□ 0.23
PARP1-209ENST00000498787 YBX3P16989 372 aaKnown RBP eCLIP16.49■□□□□ 0.232e-9■■■■■ 31.9
PARP1-209ENST00000498787 NF2P35240 595 aa16.49■□□□□ 0.23
PARP1-209ENST00000498787 TMEM266Q2M3C6 531 aa16.49■□□□□ 0.23
PARP1-209ENST00000498787 C4orf32Q8N8J7 132 aa16.49■□□□□ 0.23
PARP1-209ENST00000498787 PRPF38AQ8NAV1 312 aaKnown RBP16.49■□□□□ 0.23
PARP1-209ENST00000498787 WRNIP1Q96S55 665 aa16.49■□□□□ 0.23
PARP1-209ENST00000498787 CCDC39Q9UFE4 941 aa16.49■□□□□ 0.23
PARP1-209ENST00000498787 CTDP1Q9Y5B0 961 aaPredicted RBP16.49■□□□□ 0.23
PARP1-209ENST00000498787 IQCA1LA6NCM1 817 aa16.48■□□□□ 0.23
PARP1-209ENST00000498787 SPDYE3A6NKU9 549 aa16.48■□□□□ 0.23
PARP1-209ENST00000498787 PIK3CDO00329 1044 aa16.48■□□□□ 0.23
PARP1-209ENST00000498787 POLR2DO15514 142 aaKnown RBP16.48■□□□□ 0.23
PARP1-209ENST00000498787 PPP1R12BO60237 982 aaPredicted RBP16.48■□□□□ 0.23
PARP1-209ENST00000498787 SLFN14P0C7P3 912 aa16.48■□□□□ 0.23
PARP1-209ENST00000498787 NOM1Q5C9Z4 860 aaKnown RBP16.48■□□□□ 0.23
PARP1-209ENST00000498787 ZNF280CQ8ND82 737 aa16.48■□□□□ 0.23
PARP1-209ENST00000498787 CUEDC2Q9H467 287 aa16.48■□□□□ 0.23
PARP1-209ENST00000498787 RABGAP1Q9Y3P9 1069 aa16.48■□□□□ 0.23
PARP1-209ENST00000498787 MRVI1Q9Y6F6 885 aa16.48■□□□□ 0.23
PARP1-209ENST00000498787 ASTN2O75129 1339 aaPredicted RBP16.47■□□□□ 0.23
PARP1-209ENST00000498787 SLC26A4O43511 780 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 UBA7P41226 1012 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 ZNF165P49910 485 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 HIRAP54198 1017 aaPredicted RBP16.47■□□□□ 0.23
PARP1-209ENST00000498787 SEMA3FQ13275 785 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 TRIML1Q8N9V2 468 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 RNF214Q8ND24 703 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 RBM46Q8TBY0 533 aaKnown RBP16.47■□□□□ 0.23
PARP1-209ENST00000498787 SYMPKQ92797 1274 aaKnown RBP16.47■□□□□ 0.23
PARP1-209ENST00000498787 KIFC2Q96AC6 838 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 KLRG1Q96E93 195 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 SLF1Q9BQI6 1058 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 CCSER1Q9C0I3 900 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 MAGEF1Q9HAY2 307 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 DACH1Q9UI36 760 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 TUBE1Q9UJT0 475 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 STK24Q9Y6E0 443 aa16.47■□□□□ 0.23
PARP1-209ENST00000498787 BAZ2BQ9UIF8 2168 aaKnown RBP16.47■□□□□ 0.23
PARP1-209ENST00000498787 GOLGA6L19H0YKK7 550 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 MARCH6O60337 910 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 ZBED4O75132 1171 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 MYL1P05976 194 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 PTPRAP18433 802 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 BACE1P56817 501 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 NLRP12P59046 1061 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 TPM4P67936 248 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 PDIA5Q14554 519 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 ZYXQ15942 572 aaKnown RBP16.46■□□□□ 0.23
PARP1-209ENST00000498787 CALCRLQ16602 461 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 LONRF3Q496Y0 759 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 ANO6Q4KMQ2 910 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 CT47A1Q5JQC4 288 aaPredicted RBP16.46■□□□□ 0.23
PARP1-209ENST00000498787 MCF2L2Q86YR7 1114 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 C12orf42Q96LP6 360 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 BPIFA3Q9BQP9 254 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 MAF1Q9H063 256 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 MAP3K20Q9NYL2 800 aaKnown RBP16.46■□□□□ 0.23
PARP1-209ENST00000498787 TMOD4Q9NZQ9 345 aa16.46■□□□□ 0.23
PARP1-209ENST00000498787 GLTPD2A6NH11 291 aa16.45■□□□□ 0.22
PARP1-209ENST00000498787 BECN2A8MW95 431 aa16.45■□□□□ 0.22
PARP1-209ENST00000498787 GCOM1H8Y6P7 765 aaPredicted RBP16.45■□□□□ 0.22
PARP1-209ENST00000498787 POLR2MP0CAP2 368 aa16.45■□□□□ 0.22
PARP1-209ENST00000498787 INPP5BP32019 993 aa16.45■□□□□ 0.22
PARP1-209ENST00000498787 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
PARP1-209ENST00000498787 MAP3K9P80192 1104 aa16.45■□□□□ 0.22
PARP1-209ENST00000498787 POSTNQ15063 836 aa16.45■□□□□ 0.22
PARP1-209ENST00000498787 USH1GQ495M9 461 aa16.45■□□□□ 0.22
PARP1-209ENST00000498787 RASSF8Q8NHQ8 419 aa16.45■□□□□ 0.22
PARP1-209ENST00000498787 ANO3Q9BYT9 981 aa16.45■□□□□ 0.22
PARP1-209ENST00000498787 GTPBP4Q9BZE4 634 aaKnown RBP16.45■□□□□ 0.22
PARP1-209ENST00000498787 TMEM260Q9NX78 707 aa16.45■□□□□ 0.22
PARP1-209ENST00000498787 CSADQ9Y600 493 aa16.45■□□□□ 0.22
PARP1-209ENST00000498787 CYP3A7-CYP3A51PA0A087WV96 503 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 SMTNL1A8MU46 457 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 WNT7AO00755 349 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 ADAMTS3O15072 1205 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 TBX3O15119 743 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 ICAM1P05362 532 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 CYP3A7P24462 503 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.225e-7■■■■□ 21.7
PARP1-209ENST00000498787 GRIN1Q05586 938 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 SPP2Q13103 211 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 UBE2SQ16763 222 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 SPECC1Q5M775 1068 aa16.44■□□□□ 0.22
PARP1-209ENST00000498787 PNMA8AQ86V59 439 aaPredicted RBP16.44■□□□□ 0.22
PARP1-209ENST00000498787 SLFN12Q8IYM2 578 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms