RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 PLEKHG4BQ96PX9 1271 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 COMMD10Q9Y6G5 202 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 A0A1B0GUA9 196 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 H3BQV1 296 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 SMAPO00193 183 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 RNF8O76064 485 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 KRT14P02533 472 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 CALRP27797 417 aaKnown RBP6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 ERCC5P28715 1186 aaPredicted RBP6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 TPP2P29144 1249 aaPredicted RBP6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 PHKA1P46020 1223 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 ICA1Q05084 483 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 SNCBQ16143 134 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 CFAP100Q494V2 611 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 IFFO2Q5TF58 517 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 OTUD7BQ6GQQ9 843 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 SPATA21Q7Z572 469 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 SPICE1Q8N0Z3 855 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 MIGA1Q8NAN2 632 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 FAM76AQ8TAV0 307 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 CPLX3Q8WVH0 158 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 RNPC3Q96LT9 517 aaKnown RBP6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 SETDB2Q96T68 719 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 MMS19Q96T76 1030 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 SH3GL2Q99962 352 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 CRACR2AQ9BSW2 395 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 PCMTD2Q9NV79 361 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 MYO1AQ9UBC5 1043 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 TRPC6Q9Y210 931 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 ALS2Q96Q42 1657 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 PXDNLA1KZ92 1463 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 A0A0G2JLW4 131 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 A8MUI8 341 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 ZNF185O15231 689 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 RRM1P23921 792 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 CASP7P55210 303 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 UBASH3AP57075 661 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 STIM1Q13586 685 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 TOB2Q14106 344 aaPredicted RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 RABL6Q3YEC7 729 aaPredicted RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 RALYLQ86SE5 291 aaKnown RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 CEP57L1Q8IYX8 460 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 MAB21L3Q8N8X9 362 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 FSIP1Q8NA03 581 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 KBTBD3Q8NAB2 608 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 CAPZA3Q96KX2 299 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 NEK1Q96PY6 1258 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 MFRPQ9BY79 579 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 SCAND2PQ9GZW5 306 aaPredicted RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 CDC23Q9UJX2 597 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 USTQ9Y2C2 406 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 UTYO14607 1347 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 RNF225M0QZC1 329 aaPredicted RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 M0R2C6 588 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 COBLO75128 1261 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 ATP6V1G1O75348 118 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 BYSLQ13895 437 aaKnown RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 PUS10Q3MIT2 529 aaKnown RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 ERFEQ4G0M1 354 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 CCDC152Q4G0S7 254 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 CEP112Q8N8E3 955 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 MTMR14Q8NCE2 650 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 PRCCQ92733 491 aaPredicted RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 SELENOOQ9BVL4 669 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 NAT10Q9H0A0 1025 aaKnown RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 MUC3BQ9H195 1237 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 ACBD3Q9H3P7 528 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 ATP6V0A4Q9HBG4 840 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 SMARCAL1Q9NZC9 954 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 TMA7Q9Y2S6 64 aaKnown RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 RTCBQ9Y3I0 505 aaKnown RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 GLI3P10071 1580 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 SLC5A1P13866 664 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 KCNJ6P48051 423 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 BCAMP50895 628 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 NUBP1P53384 320 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 VSTM4Q8IW00 320 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 ZNF473Q8WTR7 871 aaKnown RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 COG1Q8WTW3 980 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 ZNF396Q96N95 335 aaPredicted RBP6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 CAMKK2Q96RR4 588 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 HAUS7Q99871 368 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 LRRC4CQ9HCJ2 640 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 ANO10Q9NW15 660 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 COL4A3BPQ9Y5P4 624 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 MYH8P13535 1937 aa6.43□□□□□ -1.38
SOX2-OT-218ENST00000498731 UBN2Q6ZU65 1347 aa6.42□□□□□ -1.38
SOX2-OT-218ENST00000498731 MINDY4BA8MYZ0 360 aa6.42□□□□□ -1.38
SOX2-OT-218ENST00000498731 PDE2AO00408 941 aaPredicted RBP6.42□□□□□ -1.38
SOX2-OT-218ENST00000498731 FOXN1O15353 648 aa6.42□□□□□ -1.38
SOX2-OT-218ENST00000498731 RNF113AO15541 343 aaKnown RBP6.42□□□□□ -1.38
SOX2-OT-218ENST00000498731 BMP6P22004 513 aa6.42□□□□□ -1.38
SOX2-OT-218ENST00000498731 KIF4BQ2VIQ3 1234 aa6.42□□□□□ -1.38
SOX2-OT-218ENST00000498731 WDR78Q5VTH9 848 aa6.42□□□□□ -1.38
SOX2-OT-218ENST00000498731 GALNT17Q6IS24 598 aa6.42□□□□□ -1.38
SOX2-OT-218ENST00000498731 INTS5Q6P9B9 1019 aaKnown RBP6.42□□□□□ -1.38
SOX2-OT-218ENST00000498731 ARHGAP27Q6ZUM4 889 aa6.42□□□□□ -1.38
SOX2-OT-218ENST00000498731 SYCP3Q8IZU3 236 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms