RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 ORC3Q9UBD5 711 aaPredicted RBP8.89□□□□□ -0.99
CDC42-205ENST00000498236 PI4KBQ9UBF8 816 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 SERPINB13Q9UIV8 391 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 PCDHB11Q9Y5F2 797 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 IGKV6D-41A0A0C4DH26 115 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 VPS37CA5D8V6 355 aaPredicted RBP8.88□□□□□ -0.99
CDC42-205ENST00000498236 H3BQV1 296 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 AXIN1O15169 862 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 AVPP01185 164 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 USP4Q13107 963 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 DLGAP5Q15398 846 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 CTC1Q2NKJ3 1217 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 ATL3Q6DD88 541 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 NBPF11Q86T75 865 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 ANKMY2Q8IV38 441 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 FOXP4Q8IVH2 680 aaPredicted RBP8.88□□□□□ -0.99
CDC42-205ENST00000498236 CRACR2BQ8N4Y2 399 aaPredicted RBP8.88□□□□□ -0.99
CDC42-205ENST00000498236 SLC44A5Q8NCS7 719 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 FBXO18Q8NFZ0 1043 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 FAM200AQ8TCP9 573 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 WASF1Q92558 559 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 DPF2Q92785 391 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 CCDC17Q96LX7 622 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 LMBRD1Q9NUN5 540 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 DNAAF2Q9NVR5 837 aaKnown RBP8.88□□□□□ -0.99
CDC42-205ENST00000498236 TOR4AQ9NXH8 423 aa8.88□□□□□ -0.99
CDC42-205ENST00000498236 NMT2O60551 498 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 RXRAP19793 462 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 KIF5BP33176 963 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 SHMT1P34896 483 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 PRELPP51888 382 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 RAB15P59190 212 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 CLDN10P78369 228 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 SSRP1Q08945 709 aaKnown RBP8.87□□□□□ -0.99
CDC42-205ENST00000498236 KCNA1Q09470 495 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 RESTQ13127 1097 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 SLC4A8Q2Y0W8 1093 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 INTS6LQ5JSJ4 861 aaKnown RBP8.87□□□□□ -0.99
CDC42-205ENST00000498236 MCTP1Q6DN14 999 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 TATDN1Q6P1N9 297 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 TMTC3Q6ZXV5 915 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 FAM83AQ86UY5 434 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 RAB11FIP4Q86YS3 637 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 ZFPM1Q8IX07 1006 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 TRIM22Q8IYM9 498 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 FAM151AQ8WW52 585 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 C8orf76Q96K31 380 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 MYL10Q9BUA6 226 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 RNF26Q9BY78 433 aaPredicted RBP8.87□□□□□ -0.99
CDC42-205ENST00000498236 TDRD3Q9H7E2 651 aaKnown RBP8.87□□□□□ -0.99
CDC42-205ENST00000498236 KAT14Q9H8E8 782 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 TMOD2Q9NZR1 351 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 PCDHAC2Q9Y5I4 1007 aa8.87□□□□□ -0.99
CDC42-205ENST00000498236 PRPF3O43395 683 aaKnown RBP8.86□□□□□ -0.99
CDC42-205ENST00000498236 WFS1O76024 890 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 DEXIO95424 95 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 TOP1P11387 765 aaKnown RBP8.86□□□□□ -0.99
CDC42-205ENST00000498236 SMARCA1P28370 1054 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 GNAQP50148 359 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 EIF6P56537 245 aaKnown RBP8.86□□□□□ -0.99
CDC42-205ENST00000498236 GRM4Q14833 912 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 ARID5BQ14865 1188 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 KLHL40Q2TBA0 621 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 FOXD4L5Q5VV16 416 aaPredicted RBP8.86□□□□□ -0.99
CDC42-205ENST00000498236 CCDC144CPQ8IYA2 1237 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 CTCFLQ8NI51 663 aaPredicted RBP8.86□□□□□ -0.99
CDC42-205ENST00000498236 NUP133Q8WUM0 1156 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 FOXD4L4Q8WXT5 416 aaPredicted RBP8.86□□□□□ -0.99
CDC42-205ENST00000498236 CDK15Q96Q40 435 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 TMEM47Q9BQJ4 181 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 LZTS2Q9BRK4 669 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 ALG1Q9BT22 464 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 FHDC1Q9C0D6 1143 aaPredicted RBP8.86□□□□□ -0.99
CDC42-205ENST00000498236 MTMR4Q9NYA4 1195 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 ZNF70Q9UC06 446 aaPredicted RBP8.86□□□□□ -0.99
CDC42-205ENST00000498236 SIPA1L1O43166 1804 aa8.86□□□□□ -0.99
CDC42-205ENST00000498236 GREB1LQ9C091 1923 aaPredicted RBP8.86□□□□□ -0.99
CDC42-205ENST00000498236 ELP1O95163 1332 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 DDTLA6NHG4 134 aaPredicted RBP8.85□□□□□ -0.99
CDC42-205ENST00000498236 MYO1BO43795 1136 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 DTNBO60941 627 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 PRPF40AO75400 957 aaKnown RBP8.85□□□□□ -0.99
CDC42-205ENST00000498236 LMNB1P20700 586 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 CACNB3P54284 484 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 KRT85P78386 507 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 RASSF7Q02833 373 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 DPYDQ12882 1025 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 BRAPQ7Z569 592 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 FAM177A1Q8N128 213 aaPredicted RBP8.85□□□□□ -0.99
CDC42-205ENST00000498236 PHKBQ93100 1093 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 CEP95Q96GE4 821 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 SLC26A6Q9BXS9 759 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 SCAND2PQ9GZW5 306 aaPredicted RBP8.85□□□□□ -0.99
CDC42-205ENST00000498236 DNAJC18Q9H819 358 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 MYOZ2Q9NPC6 264 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 HERC5Q9UII4 1024 aaKnown RBP8.85□□□□□ -0.99
CDC42-205ENST00000498236 SYNPO2Q9UMS6 1093 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 CNTNAP1P78357 1384 aa8.85□□□□□ -0.99
CDC42-205ENST00000498236 WNT10BO00744 389 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 TTLL1O95922 423 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms