RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 CABP7Q86V35 215 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 FOXP1Q9H334 677 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 CCDC169A6NNP5 214 aa10.65□□□□□ -0.71
GAPVD1-219ENST00000495955 LRCH2Q5VUJ6 765 aa10.65□□□□□ -0.71
GAPVD1-219ENST00000495955 TEX13BQ9BXU2 312 aa10.65□□□□□ -0.71
GAPVD1-219ENST00000495955 ANO3Q9BYT9 981 aa10.65□□□□□ -0.71
GAPVD1-219ENST00000495955 PRR12Q9ULL5 1215 aa10.65□□□□□ -0.71
GAPVD1-219ENST00000495955 ANTXR2P58335 489 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 PDE4CQ08493 712 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 VGLL4Q14135 290 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 MOB2Q70IA6 237 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 TMEM87AQ8NBN3 555 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 GPRC5AQ8NFJ5 357 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 FERMT2Q96AC1 680 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 RABGAP1Q9Y3P9 1069 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 LTBP3Q9NS15 1303 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 CUTAO60888 179 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 DNM2P50570 870 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 SRBD1Q8N5C6 995 aaKnown RBP10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 METTL13Q8N6R0 699 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 ANKRD13CQ8N6S4 541 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 SENP2Q9HC62 589 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 SH3GLB2Q9NR46 395 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 PCDHA6Q9UN73 950 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 PCDHA8Q9Y5H6 950 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 TCERG1LQ5VWI1 586 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 OTUD6AQ7L8S5 288 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 ATG4CQ96DT6 458 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 CDHR1Q96JP9 859 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 M0QZ92 97 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 STXBP2Q15833 593 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 CCDC40Q4G0X9 1142 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 NSUN6Q8TEA1 469 aaKnown RBP10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 GTF3C2Q8WUA4 911 aaPredicted RBP10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 IFT74Q96LB3 600 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 MTMR6Q9Y217 621 aa10.64□□□□□ -0.71
GAPVD1-219ENST00000495955 TOGARAM1Q9Y4F4 1720 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 NASPP49321 788 aaPredicted RBP10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 IGBP1P78318 339 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 KCNH3Q9ULD8 1083 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 ZEB2O60315 1214 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 RAD51AP2Q09MP3 1159 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 FAM160B1Q5W0V3 765 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 MB21D1Q8N884 522 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 PTGDRQ13258 359 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 MFSD14CQ5VZR4 134 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 POLR2DO15514 142 aaKnown RBP10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 CCDC65Q8IXS2 484 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 LEO1Q8WVC0 666 aaPredicted RBP10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 GJB4Q9NTQ9 266 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 FBXO28Q9NVF7 368 aa10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 ASTN2O75129 1339 aaPredicted RBP10.63□□□□□ -0.71
GAPVD1-219ENST00000495955 ELP1O95163 1332 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 KCNA3P22001 575 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 SMTNP53814 917 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 AP3B2Q13367 1082 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 CCDC150Q8NCX0 1101 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 MANSC4A6NHS7 340 aaPredicted RBP10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 VCAM1P19320 739 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 DEKP35659 375 aaKnown RBP10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 NAP1L1P55209 391 aaKnown RBP10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 CYP4A11Q02928 519 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 CT47A1Q5JQC4 288 aaPredicted RBP10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 FAM212AQ96EL1 285 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 TRIM47Q96LD4 638 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 MMRN2Q9H8L6 949 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 BARHL2Q9NY43 387 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 STX1AQ16623 288 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 PPP1R18Q6NYC8 613 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 C7orf43Q8WVR3 580 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 TMEM260Q9NX78 707 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 TMX2Q9Y320 296 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 PDHXO00330 501 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 TRIM21P19474 475 aaKnown RBP10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 CYP2B6P20813 491 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 CA8P35219 290 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 KIF23Q02241 960 aaPredicted RBP10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 DEFB115Q30KQ5 88 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 USP28Q96RU2 1077 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 SPZ1Q9BXG8 430 aa10.62□□□□□ -0.71
GAPVD1-219ENST00000495955 CBFA2T2O43439 604 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 GCFC2P16383 781 aaKnown RBP10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 MTIF2P46199 727 aaKnown RBP10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 PPATQ06203 517 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 XKR9Q5GH70 373 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 MIS18BP1Q6P0N0 1132 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 PPFIBP1Q86W92 1011 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 NT5C3AQ9H0P0 336 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 HARSP12081 509 aaKnown RBP10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 ZNF280AP59817 542 aaPredicted RBP10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 DYMQ7RTS9 669 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 AGBL1Q96MI9 1066 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 CPA4Q9UI42 421 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 CLIC4Q9Y696 253 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 STK36Q9NRP7 1315 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 KDM3AQ9Y4C1 1321 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 CXCL11O14625 94 aa10.61□□□□□ -0.71
GAPVD1-219ENST00000495955 BRD1O95696 1058 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms