RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 TAF1CQ15572 869 aaPredicted RBP8.01□□□□□ -1.13
VPS52-219ENST00000493379 VPS53Q5VIR6 699 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 OTUD7BQ6GQQ9 843 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 USP17L2Q6R6M4 530 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 SIAH1Q8IUQ4 282 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 ADAM32Q8TC27 787 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 RUFY2Q8WXA3 655 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 OPTNQ96CV9 577 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 DEFB118Q96PH6 123 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 NACAP1Q9BZK3 213 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 ELP3Q9H9T3 547 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 SAP30BPQ9UHR5 308 aaKnown RBP8.01□□□□□ -1.13
VPS52-219ENST00000493379 SLC45A1Q9Y2W3 748 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 XIRP2A4UGR9 3374 aa8.01□□□□□ -1.13
VPS52-219ENST00000493379 DDX60LQ5H9U9 1706 aaKnown RBP8□□□□□ -1.13
VPS52-219ENST00000493379 IGKV6D-41A0A0C4DH26 115 aa8□□□□□ -1.13
VPS52-219ENST00000493379 A0A0G2JLL6 359 aaPredicted RBP8□□□□□ -1.13
VPS52-219ENST00000493379 C19orf81C9J6K1 198 aa8□□□□□ -1.13
VPS52-219ENST00000493379 SMIM22K7EJ46 135 aa8□□□□□ -1.13
VPS52-219ENST00000493379 CYP2D6P10635 497 aa8□□□□□ -1.13
VPS52-219ENST00000493379 CETPP11597 493 aa8□□□□□ -1.13
VPS52-219ENST00000493379 KCTD2Q14681 263 aa8□□□□□ -1.13
VPS52-219ENST00000493379 GRIN2CQ14957 1233 aa8□□□□□ -1.13
VPS52-219ENST00000493379 CERKLQ49MI3 558 aaPredicted RBP8□□□□□ -1.13
VPS52-219ENST00000493379 CWC27Q6UX04 472 aaKnown RBP8□□□□□ -1.13
VPS52-219ENST00000493379 CCDC129Q6ZRS4 1044 aa8□□□□□ -1.13
VPS52-219ENST00000493379 NECAB2Q7Z6G3 386 aa8□□□□□ -1.13
VPS52-219ENST00000493379 PRRT2Q7Z6L0 340 aaPredicted RBP8□□□□□ -1.13
VPS52-219ENST00000493379 PHTF2Q8N3S3 785 aa8□□□□□ -1.13
VPS52-219ENST00000493379 RAET1EQ8TD07 263 aa8□□□□□ -1.13
VPS52-219ENST00000493379 BRI3BPQ8WY22 251 aa8□□□□□ -1.13
VPS52-219ENST00000493379 ZNF516Q92618 1163 aa8□□□□□ -1.13
VPS52-219ENST00000493379 MAP4K1Q92918 833 aa8□□□□□ -1.13
VPS52-219ENST00000493379 MKL1Q969V6 931 aa8□□□□□ -1.13
VPS52-219ENST00000493379 C12orf42Q96LP6 360 aa8□□□□□ -1.13
VPS52-219ENST00000493379 ARHGAP9Q9BRR9 750 aa8□□□□□ -1.13
VPS52-219ENST00000493379 SLC6A16Q9GZN6 736 aa8□□□□□ -1.13
VPS52-219ENST00000493379 IL21Q9HBE4 155 aa8□□□□□ -1.13
VPS52-219ENST00000493379 DIAPH3Q9NSV4 1193 aa8□□□□□ -1.13
VPS52-219ENST00000493379 SYNPO2Q9UMS6 1093 aa8□□□□□ -1.13
VPS52-219ENST00000493379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8□□□□□ -1.13
VPS52-219ENST00000493379 PCDHB9Q9Y5E1 797 aa8□□□□□ -1.13
VPS52-219ENST00000493379 TACC3Q9Y6A5 838 aa8□□□□□ -1.13
VPS52-219ENST00000493379 ZHX2Q9Y6X8 837 aa8□□□□□ -1.13
VPS52-219ENST00000493379 SIPA1L1O43166 1804 aa8□□□□□ -1.13
VPS52-219ENST00000493379 CDK5RAP2Q96SN8 1893 aa8□□□□□ -1.13
VPS52-219ENST00000493379 MYH7P12883 1935 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 CYP2D7A0A087X1C5 515 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 FAM196BA6NMK8 535 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 EPB41L2O43491 1005 aaKnown RBP7.99□□□□□ -1.13
VPS52-219ENST00000493379 ORC4O43929 436 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 RASA1P20936 1047 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 HOXA7P31268 230 aaPredicted RBP7.99□□□□□ -1.13
VPS52-219ENST00000493379 BACE1P56817 501 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 PPARAQ07869 468 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 KCNA1Q09470 495 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 SNAPC2Q13487 334 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 ELOAQ14241 798 aaKnown RBP7.99□□□□□ -1.13
VPS52-219ENST00000493379 GPAT2Q6NUI2 795 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 TMEM179Q6ZVK1 233 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 FASTKD5Q7L8L6 764 aaKnown RBP7.99□□□□□ -1.13
VPS52-219ENST00000493379 ANKRD23Q86SG2 305 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 SKAP1Q86WV1 359 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 AMOTL1Q8IY63 956 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 DEPDC4Q8N2C3 294 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 CRACR2BQ8N4Y2 399 aaPredicted RBP7.99□□□□□ -1.13
VPS52-219ENST00000493379 ZNF280CQ8ND82 737 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 NEDD1Q8NHV4 660 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 DYNLL2Q96FJ2 89 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 FBXL18Q96ME1 805 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 NAPBQ9H115 298 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 ZNF287Q9HBT7 754 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 ZFYVE28Q9HCC9 887 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 PICK1Q9NRD5 415 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 TCP11L1Q9NUJ3 509 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 SRRDQ9UH36 339 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 ZBTB21Q9ULJ3 1066 aa7.99□□□□□ -1.13
VPS52-219ENST00000493379 BTBD19C9JJ37 291 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 USP17L10C9JJH3 530 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 GH2P01242 217 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 APPP05067 770 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 PTPN5P54829 565 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 UBXN2AP68543 259 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 KIF22Q14807 665 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 CCDC85BQ15834 202 aaPredicted RBP7.98□□□□□ -1.13
VPS52-219ENST00000493379 ABCB5Q2M3G0 1257 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 TSGA10IPQ3SY00 556 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 RNF135Q8IUD6 432 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 FAM43AQ8N2R8 423 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 SLC44A5Q8NCS7 719 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 STAG1Q8WVM7 1258 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 TRIM47Q96LD4 638 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 ESYT1Q9BSJ8 1104 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 KIAA1683Q9H0B3 1180 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 GZF1Q9H116 711 aaPredicted RBP7.98□□□□□ -1.13
VPS52-219ENST00000493379 KANSL2Q9H9L4 492 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 AS3MTQ9HBK9 375 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 CABP5Q9NP86 173 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 NYAP2Q9P242 653 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 CTNNA3Q9UI47 895 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms