RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 CCDC39Q9UFE4 941 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 TTF2Q9UNY4 1162 aaKnown RBP8.43□□□□□ -1.06
VPS45-209ENST00000491789 NAV1Q8NEY1 1877 aa8.43□□□□□ -1.06
VPS45-209ENST00000491789 TSPY2A6NKD2 308 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 IGF2BP3O00425 579 aaKnown RBP eCLIP8.42□□□□□ -1.06
VPS45-209ENST00000491789 TPM3P06753 285 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 LIG1P18858 919 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 GCGRP47871 477 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 RBM5P52756 815 aaKnown RBP eCLIP8.42□□□□□ -1.06
VPS45-209ENST00000491789 RASA3Q14644 834 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 SLC39A14Q15043 492 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 NOM1Q5C9Z4 860 aaKnown RBP8.42□□□□□ -1.06
VPS45-209ENST00000491789 MFSD14BQ5SR56 506 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 NBPF11Q86T75 865 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 NOSTRINQ8IVI9 506 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 WNK4Q96J92 1243 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 TIGD1Q96MW7 591 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 TEPSINQ96N21 525 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 PTPN18Q99952 460 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 KAT14Q9H8E8 782 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 VEZTQ9HBM0 779 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 ZNF70Q9UC06 446 aaPredicted RBP8.42□□□□□ -1.06
VPS45-209ENST00000491789 NOL7Q9UMY1 257 aaKnown RBP8.42□□□□□ -1.06
VPS45-209ENST00000491789 PPP2R3BQ9Y5P8 575 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 PLIN4Q96Q06 1357 aa8.42□□□□□ -1.06
VPS45-209ENST00000491789 DDX60LQ5H9U9 1706 aaKnown RBP8.42□□□□□ -1.06
VPS45-209ENST00000491789 FAM237AA0A1B0GTK4 181 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 MYO1BO43795 1136 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 PPP1R12BO60237 982 aaPredicted RBP8.41□□□□□ -1.06
VPS45-209ENST00000491789 CUTAO60888 179 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 CMA1P23946 247 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 CALML3P27482 149 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 BTDP43251 543 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 HDLBPQ00341 1268 aaKnown RBP8.41□□□□□ -1.06
VPS45-209ENST00000491789 CAP1Q01518 475 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 GUCY1B3Q02153 619 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 TYRO3Q06418 890 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 SREBF2Q12772 1141 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 TROAPQ12815 778 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 ZRSR1Q15695 479 aaKnown RBP8.41□□□□□ -1.06
VPS45-209ENST00000491789 STX1AQ16623 288 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 SUPT20HL1Q3ZLR7 823 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 GALNT17Q6IS24 598 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 TMTC3Q6ZXV5 915 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 ELOA2Q8IYF1 753 aaPredicted RBP8.41□□□□□ -1.06
VPS45-209ENST00000491789 TEX11Q8IYF3 940 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 FSIP1Q8NA03 581 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 NUP133Q8WUM0 1156 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 PHKBQ93100 1093 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.41□□□□□ -1.06
VPS45-209ENST00000491789 MRIQ9BWK5 157 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 NAT10Q9H0A0 1025 aaKnown RBP8.41□□□□□ -1.06
VPS45-209ENST00000491789 MKNK2Q9HBH9 465 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 SH3GLB2Q9NR46 395 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 HOOK1Q9UJC3 728 aaKnown RBP8.41□□□□□ -1.06
VPS45-209ENST00000491789 SERPINA10Q9UK55 444 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 TACC3Q9Y6A5 838 aa8.41□□□□□ -1.06
VPS45-209ENST00000491789 MANSC4A6NHS7 340 aaPredicted RBP8.4□□□□□ -1.06
VPS45-209ENST00000491789 UNCXA6NJT0 531 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 GOLGA6L6A8MZA4 724 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 TCP10L2B9ZVM9 353 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 FKTNO75072 461 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 POLR3DP05423 398 aaPredicted RBP8.4□□□□□ -1.06
VPS45-209ENST00000491789 TSPY3P0CV98 308 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 TSPY8P0CW00 308 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 ZBTB48P10074 688 aaPredicted RBP8.4□□□□□ -1.06
VPS45-209ENST00000491789 RXRAP19793 462 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 SMARCA1P28370 1054 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 KRT2P35908 639 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 CRKP46108 304 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 TRAPPC10P48553 1259 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 INHBEP58166 350 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 MDM2Q00987 491 aaPredicted RBP8.4□□□□□ -1.06
VPS45-209ENST00000491789 PKN2Q16513 984 aaKnown RBP8.4□□□□□ -1.06
VPS45-209ENST00000491789 HHIPL2Q6UWX4 724 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.4□□□□□ -1.06
VPS45-209ENST00000491789 C16orf86Q6ZW13 317 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 RAB11FIP4Q86YS3 637 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 DIS3L2Q8IYB7 885 aaKnown RBP8.4□□□□□ -1.06
VPS45-209ENST00000491789 ZNF444Q8N0Y2 327 aaPredicted RBP8.4□□□□□ -1.06
VPS45-209ENST00000491789 ENGASEQ8NFI3 743 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 CCDC148Q8NFR7 591 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 SH3RF3Q8TEJ3 882 aaPredicted RBP8.4□□□□□ -1.06
VPS45-209ENST00000491789 PYM1Q9BRP8 204 aaKnown RBP8.4□□□□□ -1.06
VPS45-209ENST00000491789 ZKSCAN3Q9BRR0 538 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 MYL10Q9BUA6 226 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 TMEM39BQ9GZU3 492 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 ANO10Q9NW15 660 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 SWAP70Q9UH65 585 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 USP25Q9UHP3 1055 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 PCDHA7Q9UN72 937 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 MYH2Q9UKX2 1941 aa8.4□□□□□ -1.06
VPS45-209ENST00000491789 ZSWIM8A7E2V4 1837 aa8.4□□□□□ -1.07
VPS45-209ENST00000491789 FLT1P17948 1338 aa8.39□□□□□ -1.07
VPS45-209ENST00000491789 CNTNAP5Q8WYK1 1306 aa8.39□□□□□ -1.07
VPS45-209ENST00000491789 ESPNB1AK53 854 aa8.39□□□□□ -1.07
VPS45-209ENST00000491789 KIF28PB7ZC32 967 aa8.39□□□□□ -1.07
VPS45-209ENST00000491789 hCG_1984214I3L0E3 225 aa8.39□□□□□ -1.07
VPS45-209ENST00000491789 CACNB3P54284 484 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms